RNA–Protein interactions for RNA: ENST00000580617.5

NCOR1-220, Transcript of nuclear receptor corepressor 1, humanhuman

TSL 2

Gene NCOR1, Length 1,352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOR1-220ENST00000580617 CDC42BPAQ5VT25 1732 aa16.86■□□□□ 0.29
NCOR1-220ENST00000580617 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
NCOR1-220ENST00000580617 POGZQ7Z3K3 1410 aa16.86■□□□□ 0.29
NCOR1-220ENST00000580617 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
NCOR1-220ENST00000580617 ADAMTSL3P82987 1691 aa16.86■□□□□ 0.29
NCOR1-220ENST00000580617 BCORL1Q5H9F3 1711 aa16.85■□□□□ 0.29
NCOR1-220ENST00000580617 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
NCOR1-220ENST00000580617 SIGLEC1Q9BZZ2 1709 aa16.84■□□□□ 0.29
NCOR1-220ENST00000580617 EFCAB2Q5VUJ9 269 aa16.84■□□□□ 0.29
NCOR1-220ENST00000580617 ILDR1Q86SU0 546 aaPredicted RBP16.83■□□□□ 0.28
NCOR1-220ENST00000580617 YEATS2Q9ULM3 1422 aa16.82■□□□□ 0.28
NCOR1-220ENST00000580617 MAGI2Q86UL8 1455 aa16.82■□□□□ 0.28
NCOR1-220ENST00000580617 MADDQ8WXG6 1647 aa16.8■□□□□ 0.28
NCOR1-220ENST00000580617 ITSN2Q9NZM3 1697 aa16.8■□□□□ 0.28
NCOR1-220ENST00000580617 KDM5CP41229 1560 aa16.78■□□□□ 0.28
NCOR1-220ENST00000580617 ABCC1P33527 1531 aa16.78■□□□□ 0.28
NCOR1-220ENST00000580617 ZNF518AQ6AHZ1 1483 aa16.78■□□□□ 0.28
NCOR1-220ENST00000580617 ARID4BQ4LE39 1312 aaPredicted RBP16.77■□□□□ 0.28
NCOR1-220ENST00000580617 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
NCOR1-220ENST00000580617 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
NCOR1-220ENST00000580617 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
NCOR1-220ENST00000580617 ARHGEF12Q9NZN5 1544 aa16.75■□□□□ 0.27
NCOR1-220ENST00000580617 PTPRMP28827 1452 aa16.75■□□□□ 0.27
NCOR1-220ENST00000580617 SAMD9LQ8IVG5 1584 aa16.74■□□□□ 0.27
NCOR1-220ENST00000580617 GPATCH8Q9UKJ3 1502 aaKnown RBP16.74■□□□□ 0.27
NCOR1-220ENST00000580617 AFAP1Q8N556 730 aa16.73■□□□□ 0.27
NCOR1-220ENST00000580617 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 ATP10AO60312 1499 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 FER1L4A9Z1Z3 1794 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 C9orf84Q5VXU9 1444 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 DIP2CQ9Y2E4 1556 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 MTUS2Q5JR59 1369 aa16.72■□□□□ 0.27
NCOR1-220ENST00000580617 TRAPPC8Q9Y2L5 1435 aa16.71■□□□□ 0.27
NCOR1-220ENST00000580617 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
NCOR1-220ENST00000580617 KIDINS220Q9ULH0 1771 aa16.69■□□□□ 0.26
NCOR1-220ENST00000580617 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
NCOR1-220ENST00000580617 MLH3Q9UHC1 1453 aa16.69■□□□□ 0.26
NCOR1-220ENST00000580617 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
NCOR1-220ENST00000580617 REREQ9P2R6 1566 aa16.67■□□□□ 0.26
NCOR1-220ENST00000580617 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
NCOR1-220ENST00000580617 VPS8Q8N3P4 1428 aa16.66■□□□□ 0.26
NCOR1-220ENST00000580617 SUPT6HQ7KZ85 1726 aaKnown RBP16.65■□□□□ 0.26
NCOR1-220ENST00000580617 MLECQ14165 292 aa16.65■□□□□ 0.26
NCOR1-220ENST00000580617 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
NCOR1-220ENST00000580617 CFDP1Q9UEE9 299 aaPredicted RBP16.64■□□□□ 0.25
NCOR1-220ENST00000580617 PLEKHH2Q8IVE3 1493 aa16.62■□□□□ 0.25
NCOR1-220ENST00000580617 KIAA1107Q9UPP5 1409 aa16.62■□□□□ 0.25
NCOR1-220ENST00000580617 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
NCOR1-220ENST00000580617 INO80Q9ULG1 1556 aaPredicted RBP16.61■□□□□ 0.25
NCOR1-220ENST00000580617 HNRNPMP52272 730 aaKnown RBP eCLIP16.61■□□□□ 0.25
NCOR1-220ENST00000580617 AGLP35573 1532 aa16.6■□□□□ 0.25
NCOR1-220ENST00000580617 ATP7AQ04656 1500 aa16.6■□□□□ 0.25
NCOR1-220ENST00000580617 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.25
NCOR1-220ENST00000580617 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.24
NCOR1-220ENST00000580617 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
NCOR1-220ENST00000580617 SPAG9O60271 1321 aaKnown RBP16.57■□□□□ 0.24
NCOR1-220ENST00000580617 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
NCOR1-220ENST00000580617 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
NCOR1-220ENST00000580617 MBD5Q9P267 1494 aa16.55■□□□□ 0.24
NCOR1-220ENST00000580617 ADGBQ8N7X0 1667 aa16.54■□□□□ 0.24
NCOR1-220ENST00000580617 PLXNC1O60486 1568 aa16.54■□□□□ 0.24
NCOR1-220ENST00000580617 C3P01024 1663 aa16.54■□□□□ 0.24
NCOR1-220ENST00000580617 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
NCOR1-220ENST00000580617 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.24
NCOR1-220ENST00000580617 A2MP01023 1474 aa16.5■□□□□ 0.23
NCOR1-220ENST00000580617 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
NCOR1-220ENST00000580617 KANK4Q5T7N3 995 aaPredicted RBP16.5■□□□□ 0.23
NCOR1-220ENST00000580617 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
NCOR1-220ENST00000580617 SETD1BQ9UPS6 1966 aaKnown RBP16.49■□□□□ 0.23
NCOR1-220ENST00000580617 ARHGEF5Q12774 1597 aa16.48■□□□□ 0.23
NCOR1-220ENST00000580617 MROH2AA6NES4 1674 aa16.48■□□□□ 0.23
NCOR1-220ENST00000580617 CLTCQ00610 1675 aaKnown RBP16.47■□□□□ 0.23
NCOR1-220ENST00000580617 RTEL1-TNFRSF6BF6WH68 1400 aa16.46■□□□□ 0.23
NCOR1-220ENST00000580617 HSPA2P54652 639 aa16.45■□□□□ 0.22
NCOR1-220ENST00000580617 CNTLNQ9NXG0 1405 aa16.44■□□□□ 0.22
NCOR1-220ENST00000580617 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
NCOR1-220ENST00000580617 ESF1Q9H501 851 aaKnown RBP16.43■□□□□ 0.22
NCOR1-220ENST00000580617 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
NCOR1-220ENST00000580617 MIA2Q96PC5 1412 aa16.41■□□□□ 0.22
NCOR1-220ENST00000580617 MAST1Q9Y2H9 1570 aa16.4■□□□□ 0.22
NCOR1-220ENST00000580617 APLP2Q06481 763 aa16.39■□□□□ 0.21
NCOR1-220ENST00000580617 UHRF1BP1Q6BDS2 1440 aa16.39■□□□□ 0.21
NCOR1-220ENST00000580617 DHX29Q7Z478 1369 aaKnown RBP16.39■□□□□ 0.21
NCOR1-220ENST00000580617 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
NCOR1-220ENST00000580617 PTPN23Q9H3S7 1636 aa16.38■□□□□ 0.21
NCOR1-220ENST00000580617 GGT6Q6P531 493 aa16.38■□□□□ 0.21
NCOR1-220ENST00000580617 CROCC2H7BZ55 1655 aa16.38■□□□□ 0.21
NCOR1-220ENST00000580617 ZMYM3Q14202 1370 aa16.37■□□□□ 0.21
NCOR1-220ENST00000580617 FBXO41Q8TF61 875 aa16.36■□□□□ 0.21
NCOR1-220ENST00000580617 NPATQ14207 1427 aa16.35■□□□□ 0.21
NCOR1-220ENST00000580617 TSPY4P0CV99 314 aa16.35■□□□□ 0.21
NCOR1-220ENST00000580617 TSPY10P0CW01 314 aa16.35■□□□□ 0.21
NCOR1-220ENST00000580617 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
NCOR1-220ENST00000580617 KIF3BO15066 747 aa16.32■□□□□ 0.2
NCOR1-220ENST00000580617 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
NCOR1-220ENST00000580617 PTPRKQ15262 1439 aa16.32■□□□□ 0.2
NCOR1-220ENST00000580617 KDM5DQ9BY66 1539 aa16.32■□□□□ 0.2
NCOR1-220ENST00000580617 RNF17Q9BXT8 1623 aaKnown RBP16.32■□□□□ 0.2
NCOR1-220ENST00000580617 EIF2AK4Q9P2K8 1649 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms