RNA–Protein interactions for RNA: ENST00000580086.1

MSL1-207, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 2,638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-207ENST00000580086 SENP3Q9H4L4 574 aaPredicted RBP10.27□□□□□ -0.76
MSL1-207ENST00000580086 NCBP3Q53F19 620 aaKnown RBP10.27□□□□□ -0.77
MSL1-207ENST00000580086 PDIA4P13667 645 aaKnown RBP10.26□□□□□ -0.77
MSL1-207ENST00000580086 KDM5BQ9UGL1 1544 aa10.25□□□□□ -0.77
MSL1-207ENST00000580086 TIAM1Q13009 1591 aa10.23□□□□□ -0.77
MSL1-207ENST00000580086 HSPA5P11021 654 aaKnown RBP10.23□□□□□ -0.77
MSL1-207ENST00000580086 SLC4A3P48751 1232 aa10.23□□□□□ -0.77
MSL1-207ENST00000580086 RRP1P56182 461 aaKnown RBP10.23□□□□□ -0.77
MSL1-207ENST00000580086 RANGAP1P46060 587 aaPredicted RBP10.22□□□□□ -0.77
MSL1-207ENST00000580086 NCOA1Q15788 1441 aa10.22□□□□□ -0.77
MSL1-207ENST00000580086 EXOC6Q8TAG9 804 aa10.22□□□□□ -0.77
MSL1-207ENST00000580086 CCDC7Q96M83 1385 aa10.21□□□□□ -0.77
MSL1-207ENST00000580086 POGKQ9P215 609 aa10.21□□□□□ -0.78
MSL1-207ENST00000580086 PRXQ9BXM0 1461 aa10.2□□□□□ -0.78
MSL1-207ENST00000580086 SMARCA4P51532 1647 aa10.2□□□□□ -0.78
MSL1-207ENST00000580086 RGS3P49796 1198 aa10.2□□□□□ -0.78
MSL1-207ENST00000580086 EIF4G2P78344 907 aaKnown RBP eCLIP10.2□□□□□ -0.78
MSL1-207ENST00000580086 BCL11BQ9C0K0 894 aaPredicted RBP10.2□□□□□ -0.78
MSL1-207ENST00000580086 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
MSL1-207ENST00000580086 MAP7D2Q96T17 732 aa10.19□□□□□ -0.78
MSL1-207ENST00000580086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.18□□□□□ -0.78
MSL1-207ENST00000580086 FSD2A1L4K1 749 aa10.18□□□□□ -0.78
MSL1-207ENST00000580086 GOLGA6L3A6NEY3 463 aa10.18□□□□□ -0.78
MSL1-207ENST00000580086 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.78
MSL1-207ENST00000580086 UACAQ9BZF9 1416 aa10.17□□□□□ -0.78
MSL1-207ENST00000580086 SMAP1Q8IYB5 467 aaPredicted RBP10.17□□□□□ -0.78
MSL1-207ENST00000580086 CC2D2AQ9P2K1 1620 aa10.17□□□□□ -0.78
MSL1-207ENST00000580086 LRRC9Q6ZRR7 1453 aa10.16□□□□□ -0.78
MSL1-207ENST00000580086 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
MSL1-207ENST00000580086 ARHGAP35Q9NRY4 1499 aa10.16□□□□□ -0.78
MSL1-207ENST00000580086 CFAP43Q8NDM7 1665 aa10.16□□□□□ -0.78
MSL1-207ENST00000580086 ESPNB1AK53 854 aa10.15□□□□□ -0.78
MSL1-207ENST00000580086 PHLDB1Q86UU1 1377 aa10.15□□□□□ -0.79
MSL1-207ENST00000580086 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.79
MSL1-207ENST00000580086 TAF7LQ5H9L4 462 aa10.15□□□□□ -0.79
MSL1-207ENST00000580086 CCDC18Q5T9S5 1454 aa10.14□□□□□ -0.79
MSL1-207ENST00000580086 TERF1P54274 439 aa10.14□□□□□ -0.79
MSL1-207ENST00000580086 RCAN3Q9UKA8 241 aa10.14□□□□□ -0.79
MSL1-207ENST00000580086 KTN1Q86UP2 1357 aaKnown RBP10.13□□□□□ -0.79
MSL1-207ENST00000580086 FAM50AQ14320 339 aaKnown RBP10.13□□□□□ -0.79
MSL1-207ENST00000580086 MRE11P49959 708 aa10.13□□□□□ -0.79
MSL1-207ENST00000580086 C8orf34Q49A92 452 aa10.12□□□□□ -0.79
MSL1-207ENST00000580086 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
MSL1-207ENST00000580086 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
MSL1-207ENST00000580086 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
MSL1-207ENST00000580086 ISY1Q9ULR0 285 aaKnown RBP10.11□□□□□ -0.79
MSL1-207ENST00000580086 UTP14CQ5TAP6 766 aaKnown RBP10.11□□□□□ -0.79
MSL1-207ENST00000580086 PTPN23Q9H3S7 1636 aa10.11□□□□□ -0.79
MSL1-207ENST00000580086 BECN1Q14457 450 aa10.1□□□□□ -0.79
MSL1-207ENST00000580086 PANK2Q9BZ23 570 aa10.1□□□□□ -0.79
MSL1-207ENST00000580086 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
MSL1-207ENST00000580086 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
MSL1-207ENST00000580086 MTERF4Q7Z6M4 381 aaKnown RBP10.09□□□□□ -0.79
MSL1-207ENST00000580086 MYH16Q9H6N6 1097 aa10.09□□□□□ -0.79
MSL1-207ENST00000580086 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
MSL1-207ENST00000580086 LRPPRCP42704 1394 aaKnown RBP10.09□□□□□ -0.79
MSL1-207ENST00000580086 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
MSL1-207ENST00000580086 KIAA1211Q6ZU35 1233 aa10.09□□□□□ -0.79
MSL1-207ENST00000580086 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
MSL1-207ENST00000580086 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
MSL1-207ENST00000580086 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
MSL1-207ENST00000580086 CENPQQ7L2Z9 268 aaPredicted RBP10.08□□□□□ -0.8
MSL1-207ENST00000580086 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
MSL1-207ENST00000580086 MYOM3Q5VTT5 1437 aa10.08□□□□□ -0.8
MSL1-207ENST00000580086 ERBB4Q15303 1308 aa10.08□□□□□ -0.8
MSL1-207ENST00000580086 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
MSL1-207ENST00000580086 TRIM44Q96DX7 344 aaPredicted RBP10.07□□□□□ -0.8
MSL1-207ENST00000580086 IPO4Q8TEX9 1081 aaKnown RBP10.07□□□□□ -0.8
MSL1-207ENST00000580086 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
MSL1-207ENST00000580086 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
MSL1-207ENST00000580086 HECW1Q76N89 1606 aa10.06□□□□□ -0.8
MSL1-207ENST00000580086 ZNF326Q5BKZ1 582 aaKnown RBP10.06□□□□□ -0.8
MSL1-207ENST00000580086 RIPK4P57078 832 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 ARID4BQ4LE39 1312 aaPredicted RBP10.05□□□□□ -0.8
MSL1-207ENST00000580086 OFD1O75665 1012 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 DMTNQ08495 405 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
MSL1-207ENST00000580086 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.05□□□□□ -0.8
MSL1-207ENST00000580086 ANTXR1Q9H6X2 564 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 GRPEL1Q9HAV7 217 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 TAOK2Q9UL54 1235 aa10.05□□□□□ -0.8
MSL1-207ENST00000580086 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
MSL1-207ENST00000580086 SPATA31E1Q6ZUB1 1445 aa10.04□□□□□ -0.8
MSL1-207ENST00000580086 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
MSL1-207ENST00000580086 FMN1Q68DA7 1419 aa10.03□□□□□ -0.8
MSL1-207ENST00000580086 ARXQ96QS3 562 aa10.03□□□□□ -0.8
MSL1-207ENST00000580086 MCM4P33991 863 aa10.03□□□□□ -0.8
MSL1-207ENST00000580086 TMC1Q8TDI8 760 aa10.03□□□□□ -0.8
MSL1-207ENST00000580086 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
MSL1-207ENST00000580086 BRD4O60885 1362 aaPredicted RBP10.02□□□□□ -0.81
MSL1-207ENST00000580086 ZHX1Q9UKY1 873 aaPredicted RBP10.02□□□□□ -0.81
MSL1-207ENST00000580086 USP19O94966 1318 aa10.01□□□□□ -0.81
MSL1-207ENST00000580086 AQRO60306 1485 aaKnown RBP eCLIP10.01□□□□□ -0.812e-6■■■□□ 15.2
MSL1-207ENST00000580086 MIA2Q96PC5 1412 aa10.01□□□□□ -0.81
MSL1-207ENST00000580086 TNNT2P45379 298 aaPredicted RBP10.01□□□□□ -0.81
MSL1-207ENST00000580086 NAIPQ13075 1403 aa10□□□□□ -0.81
MSL1-207ENST00000580086 TRAK2O60296 914 aa10□□□□□ -0.81
MSL1-207ENST00000580086 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
MSL1-207ENST00000580086 SLKQ9H2G2 1235 aaPredicted RBP10□□□□□ -0.81
MSL1-207ENST00000580086 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms