RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 AKNAQ7Z591 1439 aa35.47■■■■□ 3.27
NDEL1-207ENST00000580012 CFDP1Q9UEE9 299 aaPredicted RBP35.42■■■■□ 3.26
NDEL1-207ENST00000580012 SUPT6HQ7KZ85 1726 aaKnown RBP35.41■■■■□ 3.26
NDEL1-207ENST00000580012 MYO5CQ9NQX4 1742 aa35.4■■■■□ 3.26
NDEL1-207ENST00000580012 ARHGAP5Q13017 1502 aa35.39■■■■□ 3.26
NDEL1-207ENST00000580012 PREX2Q70Z35 1606 aa35.36■■■■□ 3.25
NDEL1-207ENST00000580012 CDC42BPAQ5VT25 1732 aa35.34■■■■□ 3.25
NDEL1-207ENST00000580012 CDC42BPBQ9Y5S2 1711 aa35.34■■■■□ 3.25
NDEL1-207ENST00000580012 CFAP74Q9C0B2 1584 aa35.33■■■■□ 3.25
NDEL1-207ENST00000580012 SCAPERQ9BY12 1400 aa35.32■■■■□ 3.24
NDEL1-207ENST00000580012 RAPGEF3O95398 923 aa35.31■■■■□ 3.24
NDEL1-207ENST00000580012 ADGRL1O94910 1474 aa35.3■■■■□ 3.24
NDEL1-207ENST00000580012 ZNF777Q9ULD5 760 aaPredicted RBP35.3■■■■□ 3.24
NDEL1-207ENST00000580012 DENND4BO75064 1496 aaPredicted RBP35.29■■■■□ 3.24
NDEL1-207ENST00000580012 MYOM3Q5VTT5 1437 aa35.28■■■■□ 3.24
NDEL1-207ENST00000580012 ZNF644Q9H582 1327 aaPredicted RBP35.27■■■■□ 3.24
NDEL1-207ENST00000580012 KIAA1107Q9UPP5 1409 aa35.26■■■■□ 3.24
NDEL1-207ENST00000580012 PPARGC1BQ86YN6 1023 aaKnown RBP35.25■■■■□ 3.23
NDEL1-207ENST00000580012 MIA2Q96PC5 1412 aa35.24■■■■□ 3.23
NDEL1-207ENST00000580012 ARHGEF12Q9NZN5 1544 aa35.23■■■■□ 3.23
NDEL1-207ENST00000580012 PLEKHH2Q8IVE3 1493 aa35.21■■■■□ 3.23
NDEL1-207ENST00000580012 SAMD9LQ8IVG5 1584 aa35.2■■■■□ 3.23
NDEL1-207ENST00000580012 ABCC1P33527 1531 aa35.19■■■■□ 3.22
NDEL1-207ENST00000580012 HNRNPMP52272 730 aaKnown RBP eCLIP35.19■■■■□ 3.22
NDEL1-207ENST00000580012 POGZQ7Z3K3 1410 aa35.19■■■■□ 3.22
NDEL1-207ENST00000580012 AFAP1Q8N556 730 aa35.19■■■■□ 3.22
NDEL1-207ENST00000580012 ITSN2Q9NZM3 1697 aa35.19■■■■□ 3.22
NDEL1-207ENST00000580012 TRAPPC8Q9Y2L5 1435 aa35.15■■■■□ 3.22
NDEL1-207ENST00000580012 FRMPD1Q5SYB0 1578 aa35.14■■■■□ 3.22
NDEL1-207ENST00000580012 KDM4FA0A1W2PPD8 638 aa35.14■■■■□ 3.22
NDEL1-207ENST00000580012 MBD5Q9P267 1494 aa35.14■■■■□ 3.22
NDEL1-207ENST00000580012 FGD6Q6ZV73 1430 aa35.12■■■■□ 3.21
NDEL1-207ENST00000580012 ZNF518AQ6AHZ1 1483 aa35.1■■■■□ 3.21
NDEL1-207ENST00000580012 RSPH4AQ5TD94 716 aa35.1■■■■□ 3.21
NDEL1-207ENST00000580012 CAMSAP2Q08AD1 1489 aa35.09■■■■□ 3.21
NDEL1-207ENST00000580012 RICTORQ6R327 1708 aa35.08■■■■□ 3.21
NDEL1-207ENST00000580012 SYCP2Q9BX26 1530 aa35.07■■■■□ 3.21
NDEL1-207ENST00000580012 ZMYM4Q5VZL5 1548 aa35.05■■■■□ 3.2
NDEL1-207ENST00000580012 MAGI2Q86UL8 1455 aa35.04■■■■□ 3.2
NDEL1-207ENST00000580012 TCOF1Q13428 1488 aaKnown RBP35.03■■■■□ 3.2
NDEL1-207ENST00000580012 KDM5CP41229 1560 aa35.03■■■■□ 3.2
NDEL1-207ENST00000580012 MLH3Q9UHC1 1453 aa35.01■■■■□ 3.19
NDEL1-207ENST00000580012 SPAG9O60271 1321 aaKnown RBP34.97■■■■□ 3.19
NDEL1-207ENST00000580012 PTPN23Q9H3S7 1636 aa34.95■■■■□ 3.19
NDEL1-207ENST00000580012 YEATS2Q9ULM3 1422 aa34.95■■■■□ 3.19
NDEL1-207ENST00000580012 CCDC141Q6ZP82 1450 aa34.94■■■■□ 3.18
NDEL1-207ENST00000580012 ARHGEF5Q12774 1597 aa34.94■■■■□ 3.18
NDEL1-207ENST00000580012 TSPY4P0CV99 314 aa34.9■■■■□ 3.18
NDEL1-207ENST00000580012 TSPY10P0CW01 314 aa34.9■■■■□ 3.18
NDEL1-207ENST00000580012 RTEL1-TNFRSF6BF6WH68 1400 aa34.89■■■■□ 3.18
NDEL1-207ENST00000580012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.89■■■■□ 3.18
NDEL1-207ENST00000580012 FAM50AQ14320 339 aaKnown RBP34.89■■■■□ 3.18
NDEL1-207ENST00000580012 ZFYVE16Q7Z3T8 1539 aa34.89■■■■□ 3.18
NDEL1-207ENST00000580012 ABCC5O15440 1437 aa34.89■■■■□ 3.18
NDEL1-207ENST00000580012 RRBP1Q9P2E9 1410 aaKnown RBP34.88■■■■□ 3.17
NDEL1-207ENST00000580012 MYT1LQ9UL68 1186 aa34.86■■■■□ 3.17
NDEL1-207ENST00000580012 HECW2Q9P2P5 1572 aa34.85■■■■□ 3.17
NDEL1-207ENST00000580012 ATP10AO60312 1499 aa34.84■■■■□ 3.17
NDEL1-207ENST00000580012 ARHGEF40Q8TER5 1519 aa34.84■■■■□ 3.17
NDEL1-207ENST00000580012 DAPK1P53355 1430 aa34.81■■■■□ 3.16
NDEL1-207ENST00000580012 KIDINS220Q9ULH0 1771 aa34.79■■■■□ 3.16
NDEL1-207ENST00000580012 ATP7AQ04656 1500 aa34.79■■■■□ 3.16
NDEL1-207ENST00000580012 INO80Q9ULG1 1556 aaPredicted RBP34.78■■■■□ 3.16
NDEL1-207ENST00000580012 C9orf84Q5VXU9 1444 aa34.76■■■■□ 3.16
NDEL1-207ENST00000580012 DIP2CQ9Y2E4 1556 aa34.75■■■■□ 3.15
NDEL1-207ENST00000580012 SHANK2Q9UPX8 1470 aa34.74■■■■□ 3.15
NDEL1-207ENST00000580012 MAST1Q9Y2H9 1570 aa34.74■■■■□ 3.15
NDEL1-207ENST00000580012 DNMT1P26358 1616 aaKnown RBP34.73■■■■□ 3.15
NDEL1-207ENST00000580012 ABCA6Q8N139 1617 aa34.71■■■■□ 3.15
NDEL1-207ENST00000580012 PTPRKQ15262 1439 aa34.7■■■■□ 3.15
NDEL1-207ENST00000580012 REREQ9P2R6 1566 aa34.69■■■■□ 3.14
NDEL1-207ENST00000580012 DHX29Q7Z478 1369 aaKnown RBP34.67■■■■□ 3.14
NDEL1-207ENST00000580012 CHIC2Q9UKJ5 165 aa34.66■■■■□ 3.14
NDEL1-207ENST00000580012 A2MP01023 1474 aa34.65■■■■□ 3.14
NDEL1-207ENST00000580012 ARID4BQ4LE39 1312 aaPredicted RBP34.64■■■■□ 3.14
NDEL1-207ENST00000580012 AGLP35573 1532 aa34.63■■■■□ 3.13
NDEL1-207ENST00000580012 NCOA1Q15788 1441 aa34.63■■■■□ 3.13
NDEL1-207ENST00000580012 ANKRD30AQ9BXX3 1397 aa34.61■■■■□ 3.13
NDEL1-207ENST00000580012 ADGRL2O95490 1459 aa34.6■■■■□ 3.13
NDEL1-207ENST00000580012 RRP7BPQ9NSQ0 103 aa34.6■■■■□ 3.13
NDEL1-207ENST00000580012 CROCC2H7BZ55 1655 aa34.58■■■■□ 3.13
NDEL1-207ENST00000580012 ITGAEP38570 1179 aa34.58■■■■□ 3.13
NDEL1-207ENST00000580012 SIGLEC1Q9BZZ2 1709 aa34.58■■■■□ 3.13
NDEL1-207ENST00000580012 ROCK1Q13464 1354 aa34.57■■■■□ 3.12
NDEL1-207ENST00000580012 PLXNC1O60486 1568 aa34.57■■■■□ 3.12
NDEL1-207ENST00000580012 KIF15Q9NS87 1388 aa34.56■■■■□ 3.12
NDEL1-207ENST00000580012 ADGBQ8N7X0 1667 aa34.52■■■■□ 3.12
NDEL1-207ENST00000580012 MLECQ14165 292 aa34.49■■■■□ 3.11
NDEL1-207ENST00000580012 DUOX2Q9NRD8 1548 aa34.49■■■■□ 3.11
NDEL1-207ENST00000580012 KIF3BO15066 747 aa34.47■■■■□ 3.11
NDEL1-207ENST00000580012 PPP6R1Q9UPN7 881 aa34.43■■■■□ 3.1
NDEL1-207ENST00000580012 BCORL1Q5H9F3 1711 aa34.43■■■■□ 3.1
NDEL1-207ENST00000580012 ERBINQ96RT1 1412 aa34.42■■■■□ 3.1
NDEL1-207ENST00000580012 GGT6Q6P531 493 aa34.4■■■■□ 3.1
NDEL1-207ENST00000580012 ADAMTSL3P82987 1691 aa34.4■■■■□ 3.1
NDEL1-207ENST00000580012 ANKRD50Q9ULJ7 1429 aa34.38■■■■□ 3.09
NDEL1-207ENST00000580012 NAIPQ13075 1403 aa34.3■■■■□ 3.08
NDEL1-207ENST00000580012 EIF2AK4Q9P2K8 1649 aaKnown RBP34.3■■■■□ 3.08
NDEL1-207ENST00000580012 HFM1A2PYH4 1435 aa34.29■■■■□ 3.08
NDEL1-207ENST00000580012 MADDQ8WXG6 1647 aa34.26■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms