RNA–Protein interactions for RNA: ENST00000579396.1

SCO1-204, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 2

Gene SCO1, Length 563 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-204ENST00000579396 KDM6BO15054 1643 aa32.69■■■□□ 2.82
SCO1-204ENST00000579396 NCOA2Q15596 1464 aa32.69■■■□□ 2.82
SCO1-204ENST00000579396 SUPT6HQ7KZ85 1726 aaKnown RBP32.69■■■□□ 2.82
SCO1-204ENST00000579396 ARHGAP5Q13017 1502 aa32.68■■■□□ 2.82
SCO1-204ENST00000579396 CFAP74Q9C0B2 1584 aa32.67■■■□□ 2.82
SCO1-204ENST00000579396 COL17A1Q9UMD9 1497 aaPredicted RBP32.66■■■□□ 2.82
SCO1-204ENST00000579396 ZNF777Q9ULD5 760 aaPredicted RBP32.63■■■□□ 2.81
SCO1-204ENST00000579396 PREX2Q70Z35 1606 aa32.61■■■□□ 2.81
SCO1-204ENST00000579396 CDC42BPAQ5VT25 1732 aa32.6■■■□□ 2.81
SCO1-204ENST00000579396 CDC42BPBQ9Y5S2 1711 aa32.6■■■□□ 2.81
SCO1-204ENST00000579396 SCAPERQ9BY12 1400 aa32.6■■■□□ 2.81
SCO1-204ENST00000579396 RAPGEF3O95398 923 aa32.59■■■□□ 2.81
SCO1-204ENST00000579396 DENND4BO75064 1496 aaPredicted RBP32.59■■■□□ 2.81
SCO1-204ENST00000579396 ADGRL1O94910 1474 aa32.58■■■□□ 2.81
SCO1-204ENST00000579396 ITSN2Q9NZM3 1697 aa32.51■■■□□ 2.79
SCO1-204ENST00000579396 PLEKHH2Q8IVE3 1493 aa32.5■■■□□ 2.79
SCO1-204ENST00000579396 MYOM3Q5VTT5 1437 aa32.49■■■□□ 2.79
SCO1-204ENST00000579396 KIAA1107Q9UPP5 1409 aa32.49■■■□□ 2.79
SCO1-204ENST00000579396 MIA2Q96PC5 1412 aa32.48■■■□□ 2.79
SCO1-204ENST00000579396 HNRNPMP52272 730 aaKnown RBP eCLIP32.47■■■□□ 2.79
SCO1-204ENST00000579396 ZNF644Q9H582 1327 aaPredicted RBP32.47■■■□□ 2.79
SCO1-204ENST00000579396 PPARGC1BQ86YN6 1023 aaKnown RBP32.46■■■□□ 2.79
SCO1-204ENST00000579396 AFAP1Q8N556 730 aa32.46■■■□□ 2.79
SCO1-204ENST00000579396 RSPH4AQ5TD94 716 aa32.45■■■□□ 2.79
SCO1-204ENST00000579396 POGZQ7Z3K3 1410 aa32.43■■■□□ 2.78
SCO1-204ENST00000579396 ABCC1P33527 1531 aa32.41■■■□□ 2.78
SCO1-204ENST00000579396 SAMD9LQ8IVG5 1584 aa32.41■■■□□ 2.78
SCO1-204ENST00000579396 ZNF518AQ6AHZ1 1483 aa32.41■■■□□ 2.78
SCO1-204ENST00000579396 ARHGEF12Q9NZN5 1544 aa32.4■■■□□ 2.78
SCO1-204ENST00000579396 TRAPPC8Q9Y2L5 1435 aa32.37■■■□□ 2.77
SCO1-204ENST00000579396 MYT1LQ9UL68 1186 aa32.36■■■□□ 2.77
SCO1-204ENST00000579396 RICTORQ6R327 1708 aa32.36■■■□□ 2.77
SCO1-204ENST00000579396 MAGI2Q86UL8 1455 aa32.35■■■□□ 2.77
SCO1-204ENST00000579396 FRMPD1Q5SYB0 1578 aa32.34■■■□□ 2.77
SCO1-204ENST00000579396 SYCP2Q9BX26 1530 aa32.33■■■□□ 2.77
SCO1-204ENST00000579396 CAMSAP2Q08AD1 1489 aa32.33■■■□□ 2.77
SCO1-204ENST00000579396 FGD6Q6ZV73 1430 aa32.32■■■□□ 2.76
SCO1-204ENST00000579396 MBD5Q9P267 1494 aa32.31■■■□□ 2.76
SCO1-204ENST00000579396 ZMYM4Q5VZL5 1548 aa32.31■■■□□ 2.76
SCO1-204ENST00000579396 SPAG9O60271 1321 aaKnown RBP32.3■■■□□ 2.76
SCO1-204ENST00000579396 TSPY4P0CV99 314 aa32.29■■■□□ 2.76
SCO1-204ENST00000579396 TSPY10P0CW01 314 aa32.29■■■□□ 2.76
SCO1-204ENST00000579396 MLH3Q9UHC1 1453 aa32.27■■■□□ 2.76
SCO1-204ENST00000579396 KDM5CP41229 1560 aa32.26■■■□□ 2.75
SCO1-204ENST00000579396 PTPN23Q9H3S7 1636 aa32.22■■■□□ 2.75
SCO1-204ENST00000579396 FAM50AQ14320 339 aaKnown RBP32.22■■■□□ 2.75
SCO1-204ENST00000579396 TCOF1Q13428 1488 aaKnown RBP32.22■■■□□ 2.75
SCO1-204ENST00000579396 ZFYVE16Q7Z3T8 1539 aa32.21■■■□□ 2.75
SCO1-204ENST00000579396 CCDC141Q6ZP82 1450 aa32.21■■■□□ 2.75
SCO1-204ENST00000579396 YEATS2Q9ULM3 1422 aa32.19■■■□□ 2.74
SCO1-204ENST00000579396 KDM4FA0A1W2PPD8 638 aa32.19■■■□□ 2.74
SCO1-204ENST00000579396 ARHGEF5Q12774 1597 aa32.19■■■□□ 2.74
SCO1-204ENST00000579396 RTEL1-TNFRSF6BF6WH68 1400 aa32.17■■■□□ 2.74
SCO1-204ENST00000579396 ATP10AO60312 1499 aa32.17■■■□□ 2.74
SCO1-204ENST00000579396 HECW2Q9P2P5 1572 aa32.16■■■□□ 2.74
SCO1-204ENST00000579396 ARHGEF40Q8TER5 1519 aa32.13■■■□□ 2.73
SCO1-204ENST00000579396 ARID4BQ4LE39 1312 aaPredicted RBP32.12■■■□□ 2.73
SCO1-204ENST00000579396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.11■■■□□ 2.73
SCO1-204ENST00000579396 ABCC5O15440 1437 aa32.09■■■□□ 2.73
SCO1-204ENST00000579396 C9orf84Q5VXU9 1444 aa32.09■■■□□ 2.73
SCO1-204ENST00000579396 ATP7AQ04656 1500 aa32.09■■■□□ 2.73
SCO1-204ENST00000579396 KIDINS220Q9ULH0 1771 aa32.08■■■□□ 2.73
SCO1-204ENST00000579396 DAPK1P53355 1430 aa32.06■■■□□ 2.72
SCO1-204ENST00000579396 RRBP1Q9P2E9 1410 aaKnown RBP32.05■■■□□ 2.72
SCO1-204ENST00000579396 INO80Q9ULG1 1556 aaPredicted RBP32.02■■■□□ 2.72
SCO1-204ENST00000579396 DIP2CQ9Y2E4 1556 aa32.02■■■□□ 2.72
SCO1-204ENST00000579396 DNMT1P26358 1616 aaKnown RBP32■■■□□ 2.71
SCO1-204ENST00000579396 MAST1Q9Y2H9 1570 aa31.99■■■□□ 2.71
SCO1-204ENST00000579396 SHANK2Q9UPX8 1470 aa31.99■■■□□ 2.71
SCO1-204ENST00000579396 ABCA6Q8N139 1617 aa31.99■■■□□ 2.71
SCO1-204ENST00000579396 DHX29Q7Z478 1369 aaKnown RBP31.98■■■□□ 2.71
SCO1-204ENST00000579396 CHIC2Q9UKJ5 165 aa31.98■■■□□ 2.71
SCO1-204ENST00000579396 REREQ9P2R6 1566 aa31.98■■■□□ 2.71
SCO1-204ENST00000579396 A2MP01023 1474 aa31.97■■■□□ 2.71
SCO1-204ENST00000579396 ANKRD30AQ9BXX3 1397 aa31.95■■■□□ 2.71
SCO1-204ENST00000579396 ITGAEP38570 1179 aa31.94■■■□□ 2.7
SCO1-204ENST00000579396 RRP7BPQ9NSQ0 103 aa31.93■■■□□ 2.7
SCO1-204ENST00000579396 AGLP35573 1532 aa31.92■■■□□ 2.7
SCO1-204ENST00000579396 MLECQ14165 292 aa31.91■■■□□ 2.7
SCO1-204ENST00000579396 ADGBQ8N7X0 1667 aa31.89■■■□□ 2.7
SCO1-204ENST00000579396 NCOA1Q15788 1441 aa31.88■■■□□ 2.69
SCO1-204ENST00000579396 CROCC2H7BZ55 1655 aa31.87■■■□□ 2.69
SCO1-204ENST00000579396 KIF15Q9NS87 1388 aa31.86■■■□□ 2.69
SCO1-204ENST00000579396 KIF3BO15066 747 aa31.85■■■□□ 2.69
SCO1-204ENST00000579396 PLXNC1O60486 1568 aa31.85■■■□□ 2.69
SCO1-204ENST00000579396 PTPRKQ15262 1439 aa31.84■■■□□ 2.69
SCO1-204ENST00000579396 ADGRL2O95490 1459 aa31.84■■■□□ 2.69
SCO1-204ENST00000579396 ROCK1Q13464 1354 aa31.83■■■□□ 2.69
SCO1-204ENST00000579396 PPP6R1Q9UPN7 881 aa31.83■■■□□ 2.69
SCO1-204ENST00000579396 DUOX2Q9NRD8 1548 aa31.81■■■□□ 2.68
SCO1-204ENST00000579396 SIGLEC1Q9BZZ2 1709 aa31.81■■■□□ 2.68
SCO1-204ENST00000579396 GGT6Q6P531 493 aa31.81■■■□□ 2.68
SCO1-204ENST00000579396 ESF1Q9H501 851 aaKnown RBP31.81■■■□□ 2.68
SCO1-204ENST00000579396 BCORL1Q5H9F3 1711 aa31.8■■■□□ 2.68
SCO1-204ENST00000579396 ADAMTSL3P82987 1691 aa31.74■■■□□ 2.67
SCO1-204ENST00000579396 ERBINQ96RT1 1412 aa31.74■■■□□ 2.67
SCO1-204ENST00000579396 ANKRD50Q9ULJ7 1429 aa31.68■■■□□ 2.66
SCO1-204ENST00000579396 CNTLNQ9NXG0 1405 aa31.66■■■□□ 2.66
SCO1-204ENST00000579396 EIF2AK4Q9P2K8 1649 aaKnown RBP31.65■■■□□ 2.66
SCO1-204ENST00000579396 WASHC2CQ9Y4E1 1318 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms