RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 PLCH2O75038 1416 aa14.06□□□□□ -0.16
AC011840.3-201ENST00000579378 FER1L4A9Z1Z3 1794 aa14.05□□□□□ -0.16
AC011840.3-201ENST00000579378 CDK13Q14004 1512 aaKnown RBP14.05□□□□□ -0.16
AC011840.3-201ENST00000579378 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
AC011840.3-201ENST00000579378 SETD1BQ9UPS6 1966 aaKnown RBP14.03□□□□□ -0.16
AC011840.3-201ENST00000579378 ATP10AO60312 1499 aa14.02□□□□□ -0.16
AC011840.3-201ENST00000579378 ATP1B4Q9UN42 357 aaPredicted RBP14.02□□□□□ -0.17
AC011840.3-201ENST00000579378 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
AC011840.3-201ENST00000579378 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
AC011840.3-201ENST00000579378 ARHGEF12Q9NZN5 1544 aa13.99□□□□□ -0.17
AC011840.3-201ENST00000579378 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
AC011840.3-201ENST00000579378 CDK11AQ9UQ88 783 aaPredicted RBP13.98□□□□□ -0.17
AC011840.3-201ENST00000579378 C9orf84Q5VXU9 1444 aa13.98□□□□□ -0.17
AC011840.3-201ENST00000579378 PREX1Q8TCU6 1659 aa13.98□□□□□ -0.17
AC011840.3-201ENST00000579378 AFAP1Q8N556 730 aa13.97□□□□□ -0.17
AC011840.3-201ENST00000579378 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
AC011840.3-201ENST00000579378 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
AC011840.3-201ENST00000579378 FMN1Q68DA7 1419 aa13.96□□□□□ -0.18
AC011840.3-201ENST00000579378 STRCQ7RTU9 1775 aa13.96□□□□□ -0.18
AC011840.3-201ENST00000579378 KIF14Q15058 1648 aa13.94□□□□□ -0.18
AC011840.3-201ENST00000579378 MYT1LQ9UL68 1186 aa13.94□□□□□ -0.18
AC011840.3-201ENST00000579378 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
AC011840.3-201ENST00000579378 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
AC011840.3-201ENST00000579378 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
AC011840.3-201ENST00000579378 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
AC011840.3-201ENST00000579378 KDM5CP41229 1560 aa13.91□□□□□ -0.18
AC011840.3-201ENST00000579378 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
AC011840.3-201ENST00000579378 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
AC011840.3-201ENST00000579378 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.19
AC011840.3-201ENST00000579378 DIP2CQ9Y2E4 1556 aa13.88□□□□□ -0.19
AC011840.3-201ENST00000579378 CLIP1P30622 1438 aa13.88□□□□□ -0.19
AC011840.3-201ENST00000579378 C3P01024 1663 aa13.88□□□□□ -0.19
AC011840.3-201ENST00000579378 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
AC011840.3-201ENST00000579378 ILDR2Q71H61 639 aa13.87□□□□□ -0.19
AC011840.3-201ENST00000579378 REREQ9P2R6 1566 aa13.87□□□□□ -0.19
AC011840.3-201ENST00000579378 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
AC011840.3-201ENST00000579378 ESF1Q9H501 851 aaKnown RBP13.86□□□□□ -0.19
AC011840.3-201ENST00000579378 ABCA6Q8N139 1617 aa13.86□□□□□ -0.19
AC011840.3-201ENST00000579378 PTPRTO14522 1441 aa13.85□□□□□ -0.19
AC011840.3-201ENST00000579378 TRAPPC8Q9Y2L5 1435 aa13.85□□□□□ -0.19
AC011840.3-201ENST00000579378 AGLP35573 1532 aa13.84□□□□□ -0.19
AC011840.3-201ENST00000579378 KIDINS220Q9ULH0 1771 aa13.83□□□□□ -0.2
AC011840.3-201ENST00000579378 PREX2Q70Z35 1606 aa13.82□□□□□ -0.2
AC011840.3-201ENST00000579378 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
AC011840.3-201ENST00000579378 ABCC1P33527 1531 aa13.81□□□□□ -0.2
AC011840.3-201ENST00000579378 SOCS7O14512 581 aa13.81□□□□□ -0.2
AC011840.3-201ENST00000579378 CDC42BPAQ5VT25 1732 aa13.8□□□□□ -0.2
AC011840.3-201ENST00000579378 LTBP4Q8N2S1 1624 aa13.79□□□□□ -0.2
AC011840.3-201ENST00000579378 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
AC011840.3-201ENST00000579378 CASKIN1Q8WXD9 1431 aa13.79□□□□□ -0.2
AC011840.3-201ENST00000579378 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
AC011840.3-201ENST00000579378 NCOA1Q15788 1441 aa13.77□□□□□ -0.21
AC011840.3-201ENST00000579378 CCDC18Q5T9S5 1454 aa13.77□□□□□ -0.21
AC011840.3-201ENST00000579378 ZNF777Q9ULD5 760 aaPredicted RBP13.77□□□□□ -0.21
AC011840.3-201ENST00000579378 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
AC011840.3-201ENST00000579378 HNRNPMP52272 730 aaKnown RBP eCLIP13.76□□□□□ -0.21
AC011840.3-201ENST00000579378 SAMD9LQ8IVG5 1584 aa13.75□□□□□ -0.21
AC011840.3-201ENST00000579378 SPAG9O60271 1321 aaKnown RBP13.75□□□□□ -0.21
AC011840.3-201ENST00000579378 SUPT6HQ7KZ85 1726 aaKnown RBP13.75□□□□□ -0.21
AC011840.3-201ENST00000579378 MROH2AA6NES4 1674 aa13.75□□□□□ -0.21
AC011840.3-201ENST00000579378 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
AC011840.3-201ENST00000579378 IQSEC2Q5JU85 1478 aa13.74□□□□□ -0.21
AC011840.3-201ENST00000579378 NCKAP5LQ9HCH0 1330 aa13.74□□□□□ -0.21
AC011840.3-201ENST00000579378 NPATQ14207 1427 aa13.73□□□□□ -0.21
AC011840.3-201ENST00000579378 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
AC011840.3-201ENST00000579378 GPATCH8Q9UKJ3 1502 aaKnown RBP13.72□□□□□ -0.21
AC011840.3-201ENST00000579378 SYCP2Q9BX26 1530 aa13.7□□□□□ -0.22
AC011840.3-201ENST00000579378 ZNF335Q9H4Z2 1342 aaPredicted RBP13.7□□□□□ -0.22
AC011840.3-201ENST00000579378 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
AC011840.3-201ENST00000579378 GGT6Q6P531 493 aa13.7□□□□□ -0.22
AC011840.3-201ENST00000579378 PKD2Q13563 968 aa13.69□□□□□ -0.22
AC011840.3-201ENST00000579378 CFDP1Q9UEE9 299 aaPredicted RBP13.69□□□□□ -0.22
AC011840.3-201ENST00000579378 FYCO1Q9BQS8 1478 aa13.68□□□□□ -0.22
AC011840.3-201ENST00000579378 KIAA1107Q9UPP5 1409 aa13.68□□□□□ -0.22
AC011840.3-201ENST00000579378 UBAP1LF5GYI3 381 aa13.68□□□□□ -0.22
AC011840.3-201ENST00000579378 ATP7AQ04656 1500 aa13.68□□□□□ -0.22
AC011840.3-201ENST00000579378 A2MP01023 1474 aa13.67□□□□□ -0.22
AC011840.3-201ENST00000579378 PTPRKQ15262 1439 aa13.66□□□□□ -0.22
AC011840.3-201ENST00000579378 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
AC011840.3-201ENST00000579378 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
AC011840.3-201ENST00000579378 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
AC011840.3-201ENST00000579378 PLEKHH2Q8IVE3 1493 aa13.65□□□□□ -0.22
AC011840.3-201ENST00000579378 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
AC011840.3-201ENST00000579378 INO80Q9ULG1 1556 aaPredicted RBP13.65□□□□□ -0.22
AC011840.3-201ENST00000579378 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
AC011840.3-201ENST00000579378 CEP170BQ9Y4F5 1589 aaPredicted RBP13.64□□□□□ -0.23
AC011840.3-201ENST00000579378 TCOF1Q13428 1488 aaKnown RBP13.64□□□□□ -0.23
AC011840.3-201ENST00000579378 CCNB3Q8WWL7 1395 aa13.64□□□□□ -0.23
AC011840.3-201ENST00000579378 ZNF644Q9H582 1327 aaPredicted RBP13.63□□□□□ -0.23
AC011840.3-201ENST00000579378 ADGBQ8N7X0 1667 aa13.63□□□□□ -0.23
AC011840.3-201ENST00000579378 MTUS2Q5JR59 1369 aa13.6□□□□□ -0.23
AC011840.3-201ENST00000579378 DNMT1P26358 1616 aaKnown RBP13.6□□□□□ -0.23
AC011840.3-201ENST00000579378 A2ML1A8K2U0 1454 aa13.59□□□□□ -0.23
AC011840.3-201ENST00000579378 MBD5Q9P267 1494 aa13.59□□□□□ -0.23
AC011840.3-201ENST00000579378 DHX29Q7Z478 1369 aaKnown RBP13.58□□□□□ -0.23
AC011840.3-201ENST00000579378 FBXO31Q5XUX0 539 aaPredicted RBP13.58□□□□□ -0.24
AC011840.3-201ENST00000579378 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
AC011840.3-201ENST00000579378 KIF3BO15066 747 aa13.57□□□□□ -0.24
AC011840.3-201ENST00000579378 HSPA1LP34931 641 aa13.56□□□□□ -0.24
AC011840.3-201ENST00000579378 TIAM1Q13009 1591 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms