RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 ARHGAP5Q13017 1502 aa10.27□□□□□ -0.77
TRAF4-213ENST00000578917 ADGRL1O94910 1474 aa10.26□□□□□ -0.77
TRAF4-213ENST00000578917 TTC37Q6PGP7 1564 aa10.26□□□□□ -0.77
TRAF4-213ENST00000578917 VPS8Q8N3P4 1428 aa10.25□□□□□ -0.77
TRAF4-213ENST00000578917 HNRNPMP52272 730 aaKnown RBP eCLIP10.25□□□□□ -0.77
TRAF4-213ENST00000578917 MLECQ14165 292 aa10.24□□□□□ -0.77
TRAF4-213ENST00000578917 CFAP74Q9C0B2 1584 aa10.22□□□□□ -0.77
TRAF4-213ENST00000578917 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
TRAF4-213ENST00000578917 PLPPR3Q6T4P5 718 aa10.21□□□□□ -0.77
TRAF4-213ENST00000578917 SPAG9O60271 1321 aaKnown RBP10.2□□□□□ -0.78
TRAF4-213ENST00000578917 POGZQ7Z3K3 1410 aa10.2□□□□□ -0.78
TRAF4-213ENST00000578917 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
TRAF4-213ENST00000578917 ZNF644Q9H582 1327 aaPredicted RBP10.2□□□□□ -0.78
TRAF4-213ENST00000578917 GPATCH8Q9UKJ3 1502 aaKnown RBP10.2□□□□□ -0.78
TRAF4-213ENST00000578917 ZNF518AQ6AHZ1 1483 aa10.18□□□□□ -0.78
TRAF4-213ENST00000578917 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
TRAF4-213ENST00000578917 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
TRAF4-213ENST00000578917 YEATS2Q9ULM3 1422 aa10.17□□□□□ -0.78
TRAF4-213ENST00000578917 MYO5CQ9NQX4 1742 aa10.17□□□□□ -0.78
TRAF4-213ENST00000578917 TSPY4P0CV99 314 aa10.17□□□□□ -0.78
TRAF4-213ENST00000578917 TSPY10P0CW01 314 aa10.17□□□□□ -0.78
TRAF4-213ENST00000578917 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 RSPH4AQ5TD94 716 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 EHBP1L1Q8N3D4 1523 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 ATP10AO60312 1499 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 NCOA2Q15596 1464 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 LRRC9Q6ZRR7 1453 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
TRAF4-213ENST00000578917 TIAM1Q13009 1591 aa10.14□□□□□ -0.79
TRAF4-213ENST00000578917 KIAA1107Q9UPP5 1409 aa10.14□□□□□ -0.79
TRAF4-213ENST00000578917 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
TRAF4-213ENST00000578917 ARHGEF12Q9NZN5 1544 aa10.13□□□□□ -0.79
TRAF4-213ENST00000578917 PREX2Q70Z35 1606 aa10.12□□□□□ -0.79
TRAF4-213ENST00000578917 PPARGC1BQ86YN6 1023 aaKnown RBP10.12□□□□□ -0.79
TRAF4-213ENST00000578917 C9orf84Q5VXU9 1444 aa10.12□□□□□ -0.79
TRAF4-213ENST00000578917 MAP3K1Q13233 1512 aa10.12□□□□□ -0.79
TRAF4-213ENST00000578917 ZMYM4Q5VZL5 1548 aa10.12□□□□□ -0.79
TRAF4-213ENST00000578917 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
TRAF4-213ENST00000578917 GGT6Q6P531 493 aa10.11□□□□□ -0.79
TRAF4-213ENST00000578917 RICTORQ6R327 1708 aa10.1□□□□□ -0.79
TRAF4-213ENST00000578917 CDC42BPBQ9Y5S2 1711 aa10.1□□□□□ -0.79
TRAF4-213ENST00000578917 FAM50AQ14320 339 aaKnown RBP10.1□□□□□ -0.79
TRAF4-213ENST00000578917 ABCC1P33527 1531 aa10.1□□□□□ -0.79
TRAF4-213ENST00000578917 ARHGEF40Q8TER5 1519 aa10.1□□□□□ -0.79
TRAF4-213ENST00000578917 SYCP2Q9BX26 1530 aa10.1□□□□□ -0.79
TRAF4-213ENST00000578917 SUPT6HQ7KZ85 1726 aaKnown RBP10.1□□□□□ -0.79
TRAF4-213ENST00000578917 CEBPAP49715 358 aaPredicted RBP10.09□□□□□ -0.79
TRAF4-213ENST00000578917 MYOM3Q5VTT5 1437 aa10.08□□□□□ -0.8
TRAF4-213ENST00000578917 CDC42BPAQ5VT25 1732 aa10.08□□□□□ -0.8
TRAF4-213ENST00000578917 PTPRMP28827 1452 aa10.08□□□□□ -0.8
TRAF4-213ENST00000578917 SAMD9LQ8IVG5 1584 aa10.08□□□□□ -0.8
TRAF4-213ENST00000578917 KDM5CP41229 1560 aa10.07□□□□□ -0.8
TRAF4-213ENST00000578917 KIF3BO15066 747 aa10.07□□□□□ -0.8
TRAF4-213ENST00000578917 MIA2Q96PC5 1412 aa10.07□□□□□ -0.8
TRAF4-213ENST00000578917 HECW2Q9P2P5 1572 aa10.06□□□□□ -0.8
TRAF4-213ENST00000578917 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
TRAF4-213ENST00000578917 MBD5Q9P267 1494 aa10.06□□□□□ -0.8
TRAF4-213ENST00000578917 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
TRAF4-213ENST00000578917 RRP7BPQ9NSQ0 103 aa10.05□□□□□ -0.8
TRAF4-213ENST00000578917 CHIC2Q9UKJ5 165 aa10.05□□□□□ -0.8
TRAF4-213ENST00000578917 ITSN2Q9NZM3 1697 aa10.05□□□□□ -0.8
TRAF4-213ENST00000578917 A2MP01023 1474 aa10.04□□□□□ -0.8
TRAF4-213ENST00000578917 RTEL1-TNFRSF6BF6WH68 1400 aa10.04□□□□□ -0.8
TRAF4-213ENST00000578917 DHX29Q7Z478 1369 aaKnown RBP10.03□□□□□ -0.8
TRAF4-213ENST00000578917 ATP7AQ04656 1500 aa10.03□□□□□ -0.8
TRAF4-213ENST00000578917 ITGAEP38570 1179 aa10.03□□□□□ -0.8
TRAF4-213ENST00000578917 PPP6R1Q9UPN7 881 aa10.03□□□□□ -0.8
TRAF4-213ENST00000578917 DIP2CQ9Y2E4 1556 aa10.03□□□□□ -0.8
TRAF4-213ENST00000578917 WASHC2CQ9Y4E1 1318 aa10.03□□□□□ -0.8
TRAF4-213ENST00000578917 BCORL1Q5H9F3 1711 aa10.02□□□□□ -0.8
TRAF4-213ENST00000578917 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.81
TRAF4-213ENST00000578917 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
TRAF4-213ENST00000578917 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
TRAF4-213ENST00000578917 HSPA2P54652 639 aa10.01□□□□□ -0.81
TRAF4-213ENST00000578917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.01□□□□□ -0.813e-12■■■□□ 16
TRAF4-213ENST00000578917 ABCA6Q8N139 1617 aa10□□□□□ -0.81
TRAF4-213ENST00000578917 AGLP35573 1532 aa10□□□□□ -0.81
TRAF4-213ENST00000578917 ZMYM3Q14202 1370 aa10□□□□□ -0.81
TRAF4-213ENST00000578917 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
TRAF4-213ENST00000578917 KIDINS220Q9ULH0 1771 aa9.99□□□□□ -0.81
TRAF4-213ENST00000578917 RIMS1Q86UR5 1692 aaKnown RBP9.98□□□□□ -0.81
TRAF4-213ENST00000578917 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
TRAF4-213ENST00000578917 ABCC5O15440 1437 aa9.98□□□□□ -0.81
TRAF4-213ENST00000578917 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
TRAF4-213ENST00000578917 KIF15Q9NS87 1388 aa9.97□□□□□ -0.81
TRAF4-213ENST00000578917 ARHGEF5Q12774 1597 aa9.97□□□□□ -0.81
TRAF4-213ENST00000578917 DAPK1P53355 1430 aa9.96□□□□□ -0.82
TRAF4-213ENST00000578917 INO80Q9ULG1 1556 aaPredicted RBP9.96□□□□□ -0.82
TRAF4-213ENST00000578917 SIGLEC1Q9BZZ2 1709 aa9.96□□□□□ -0.82
TRAF4-213ENST00000578917 PTPN23Q9H3S7 1636 aa9.95□□□□□ -0.82
TRAF4-213ENST00000578917 UHRF1BP1Q6BDS2 1440 aa9.94□□□□□ -0.82
TRAF4-213ENST00000578917 KANK1Q14678 1352 aa9.94□□□□□ -0.82
TRAF4-213ENST00000578917 FBXO31Q5XUX0 539 aaPredicted RBP9.94□□□□□ -0.82
TRAF4-213ENST00000578917 DMRT2Q9Y5R5 561 aa9.94□□□□□ -0.82
TRAF4-213ENST00000578917 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
TRAF4-213ENST00000578917 TCOF1Q13428 1488 aaKnown RBP9.93□□□□□ -0.82
TRAF4-213ENST00000578917 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
TRAF4-213ENST00000578917 ADGBQ8N7X0 1667 aa9.92□□□□□ -0.82
TRAF4-213ENST00000578917 LMTK3Q96Q04 1460 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms