RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 CRISPLD2Q9H0B8 497 aa11.47□□□□□ -0.57
PTPRM-207ENST00000578571 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
PTPRM-207ENST00000578571 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
PTPRM-207ENST00000578571 KIF3CO14782 793 aa11.42□□□□□ -0.58
PTPRM-207ENST00000578571 PDE4AP27815 886 aa11.42□□□□□ -0.58
PTPRM-207ENST00000578571 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-207ENST00000578571 MFSD10Q14728 455 aa11.4□□□□□ -0.58
PTPRM-207ENST00000578571 LARP6Q9BRS8 491 aaKnown RBP11.4□□□□□ -0.58
PTPRM-207ENST00000578571 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
PTPRM-207ENST00000578571 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
PTPRM-207ENST00000578571 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
PTPRM-207ENST00000578571 LHX8Q68G74 356 aa11.37□□□□□ -0.59
PTPRM-207ENST00000578571 DDX27Q96GQ7 796 aaKnown RBP11.36□□□□□ -0.59
PTPRM-207ENST00000578571 DSG2Q14126 1118 aa11.35□□□□□ -0.59
PTPRM-207ENST00000578571 MAMSTRQ6ZN01 415 aa11.35□□□□□ -0.59
PTPRM-207ENST00000578571 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
PTPRM-207ENST00000578571 FOXK1P85037 733 aa11.34□□□□□ -0.59
PTPRM-207ENST00000578571 WDR70Q9NW82 654 aa11.34□□□□□ -0.59
PTPRM-207ENST00000578571 PPP1R15BQ5SWA1 713 aa11.33□□□□□ -0.6
PTPRM-207ENST00000578571 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
PTPRM-207ENST00000578571 PLPP6Q8IY26 295 aa11.29□□□□□ -0.6
PTPRM-207ENST00000578571 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
PTPRM-207ENST00000578571 CAMK2BQ13554 666 aa11.27□□□□□ -0.61
PTPRM-207ENST00000578571 E2F4Q16254 413 aa11.26□□□□□ -0.61
PTPRM-207ENST00000578571 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
PTPRM-207ENST00000578571 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
PTPRM-207ENST00000578571 P3H3Q8IVL6 736 aa11.21□□□□□ -0.61
PTPRM-207ENST00000578571 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
PTPRM-207ENST00000578571 ARIH1Q9Y4X5 557 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-207ENST00000578571 SLC34A2O95436 690 aa11.17□□□□□ -0.62
PTPRM-207ENST00000578571 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
PTPRM-207ENST00000578571 ARHGEF1Q92888 912 aaKnown RBP11.16□□□□□ -0.62
PTPRM-207ENST00000578571 PTCD2Q8WV60 388 aaKnown RBP11.14□□□□□ -0.63
PTPRM-207ENST00000578571 UPF1Q92900 1129 aaKnown RBP eCLIP11.14□□□□□ -0.63
PTPRM-207ENST00000578571 DPYSL4O14531 572 aa11.13□□□□□ -0.63
PTPRM-207ENST00000578571 DOK7Q18PE1 504 aa11.12□□□□□ -0.63
PTPRM-207ENST00000578571 SNPHO15079 494 aa11.09□□□□□ -0.63
PTPRM-207ENST00000578571 PCDHGA4Q9Y5G9 962 aa11.09□□□□□ -0.63
PTPRM-207ENST00000578571 MAP3K9P80192 1104 aa11.08□□□□□ -0.64
PTPRM-207ENST00000578571 PDIA6Q15084 440 aa11.06□□□□□ -0.64
PTPRM-207ENST00000578571 ZSWIM6Q9HCJ5 1215 aa11.06□□□□□ -0.64
PTPRM-207ENST00000578571 TBC1D12O60347 775 aa11.05□□□□□ -0.64
PTPRM-207ENST00000578571 GPR153Q6NV75 609 aa11.05□□□□□ -0.64
PTPRM-207ENST00000578571 KDM4FA0A1W2PPD8 638 aa11.04□□□□□ -0.64
PTPRM-207ENST00000578571 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
PTPRM-207ENST00000578571 ARSIQ5FYB1 569 aa11.04□□□□□ -0.64
PTPRM-207ENST00000578571 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
PTPRM-207ENST00000578571 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPRM-207ENST00000578571 BCANQ96GW7 911 aa11.04□□□□□ -0.64
PTPRM-207ENST00000578571 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
PTPRM-207ENST00000578571 NBR1Q14596 966 aa11.03□□□□□ -0.64
PTPRM-207ENST00000578571 SEMA3EO15041 775 aa11.02□□□□□ -0.65
PTPRM-207ENST00000578571 EVI5O60447 810 aa11.02□□□□□ -0.65
PTPRM-207ENST00000578571 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
PTPRM-207ENST00000578571 NUDT7P0C024 238 aa10.99□□□□□ -0.65
PTPRM-207ENST00000578571 HOXB1P14653 301 aaPredicted RBP10.99□□□□□ -0.65
PTPRM-207ENST00000578571 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
PTPRM-207ENST00000578571 ST18O60284 1047 aa10.98□□□□□ -0.65
PTPRM-207ENST00000578571 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
PTPRM-207ENST00000578571 PTGER2P43116 358 aa10.96□□□□□ -0.65
PTPRM-207ENST00000578571 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
PTPRM-207ENST00000578571 ZNF316A6NFI3 1004 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-207ENST00000578571 FAM163AQ96GL9 167 aaPredicted RBP10.94□□□□□ -0.66
PTPRM-207ENST00000578571 DDX12PQ92771 950 aa10.92□□□□□ -0.66
PTPRM-207ENST00000578571 LHX6Q9UPM6 363 aa10.91□□□□□ -0.66
PTPRM-207ENST00000578571 GRXCR2A6NFK2 248 aa10.89□□□□□ -0.67
PTPRM-207ENST00000578571 PHF14O94880 888 aa10.87□□□□□ -0.67
PTPRM-207ENST00000578571 FOSBP53539 338 aa10.87□□□□□ -0.67
PTPRM-207ENST00000578571 MARVELD3Q96A59 401 aa10.87□□□□□ -0.67
PTPRM-207ENST00000578571 JPH4Q96JJ6 628 aa10.87□□□□□ -0.67
PTPRM-207ENST00000578571 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
PTPRM-207ENST00000578571 OSBPP22059 807 aa10.86□□□□□ -0.67
PTPRM-207ENST00000578571 PRIM1P49642 420 aaKnown RBP10.86□□□□□ -0.67
PTPRM-207ENST00000578571 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTPRM-207ENST00000578571 EMP3P54852 163 aa10.85□□□□□ -0.67
PTPRM-207ENST00000578571 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
PTPRM-207ENST00000578571 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
PTPRM-207ENST00000578571 EPAS1Q99814 870 aa10.83□□□□□ -0.68
PTPRM-207ENST00000578571 RBM26Q5T8P6 1007 aaKnown RBP10.82□□□□□ -0.68
PTPRM-207ENST00000578571 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
PTPRM-207ENST00000578571 PLSCR2Q9NRY7 297 aa10.82□□□□□ -0.68
PTPRM-207ENST00000578571 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-207ENST00000578571 TULP1O00294 542 aaPredicted RBP10.81□□□□□ -0.68
PTPRM-207ENST00000578571 LMOD2Q6P5Q4 547 aa10.81□□□□□ -0.68
PTPRM-207ENST00000578571 ERBB3P21860 1342 aa10.81□□□□□ -0.68
PTPRM-207ENST00000578571 EN1Q05925 392 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-207ENST00000578571 ZDHHC16Q969W1 377 aa10.8□□□□□ -0.68
PTPRM-207ENST00000578571 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
PTPRM-207ENST00000578571 PPP4R3BQ5MIZ7 849 aa10.79□□□□□ -0.68
PTPRM-207ENST00000578571 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
PTPRM-207ENST00000578571 POTEBQ6S5H4 581 aa10.79□□□□□ -0.68
PTPRM-207ENST00000578571 FBXW7Q969H0 707 aa10.79□□□□□ -0.68
PTPRM-207ENST00000578571 FAM205CA6NFA0 338 aa10.78□□□□□ -0.68
PTPRM-207ENST00000578571 ADAM33Q9BZ11 813 aa10.78□□□□□ -0.68
PTPRM-207ENST00000578571 RBM33Q96EV2 1170 aaKnown RBP10.77□□□□□ -0.69
PTPRM-207ENST00000578571 HS3ST6Q96QI5 342 aa10.76□□□□□ -0.69
PTPRM-207ENST00000578571 MAP3K7O43318 606 aa10.75□□□□□ -0.69
PTPRM-207ENST00000578571 TSR1Q2NL82 804 aaKnown RBP10.75□□□□□ -0.69
PTPRM-207ENST00000578571 BCL2L12Q9HB09 334 aa10.75□□□□□ -0.69
PTPRM-207ENST00000578571 CDHR5Q9HBB8 845 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 161.8 ms