RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 FANCAO15360 1455 aa19.28■□□□□ 0.68
RARA-208ENST00000577646 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
RARA-208ENST00000577646 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
RARA-208ENST00000577646 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
RARA-208ENST00000577646 NCOA2Q15596 1464 aa19.25■□□□□ 0.67
RARA-208ENST00000577646 PREX2Q70Z35 1606 aa19.24■□□□□ 0.67
RARA-208ENST00000577646 CFDP1Q9UEE9 299 aaPredicted RBP19.23■□□□□ 0.67
RARA-208ENST00000577646 ARHGAP5Q13017 1502 aa19.23■□□□□ 0.67
RARA-208ENST00000577646 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
RARA-208ENST00000577646 CDC42BPAQ5VT25 1732 aa19.21■□□□□ 0.67
RARA-208ENST00000577646 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
RARA-208ENST00000577646 PLEKHH2Q8IVE3 1493 aa19.2■□□□□ 0.66
RARA-208ENST00000577646 DENND4BO75064 1496 aaPredicted RBP19.18■□□□□ 0.66
RARA-208ENST00000577646 ADGRL1O94910 1474 aa19.18■□□□□ 0.66
RARA-208ENST00000577646 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
RARA-208ENST00000577646 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
RARA-208ENST00000577646 ILDR1Q86SU0 546 aaPredicted RBP19.17■□□□□ 0.66
RARA-208ENST00000577646 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
RARA-208ENST00000577646 RSPH4AQ5TD94 716 aa19.16■□□□□ 0.66
RARA-208ENST00000577646 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
RARA-208ENST00000577646 RAPGEF3O95398 923 aa19.13■□□□□ 0.65
RARA-208ENST00000577646 ZNF518AQ6AHZ1 1483 aa19.12■□□□□ 0.65
RARA-208ENST00000577646 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
RARA-208ENST00000577646 ZNF777Q9ULD5 760 aaPredicted RBP19.11■□□□□ 0.65
RARA-208ENST00000577646 ABCC1P33527 1531 aa19.1■□□□□ 0.65
RARA-208ENST00000577646 POGZQ7Z3K3 1410 aa19.1■□□□□ 0.65
RARA-208ENST00000577646 SAMD9LQ8IVG5 1584 aa19.09■□□□□ 0.65
RARA-208ENST00000577646 RICTORQ6R327 1708 aa19.08■□□□□ 0.64
RARA-208ENST00000577646 ZMYM4Q5VZL5 1548 aa19.07■□□□□ 0.64
RARA-208ENST00000577646 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
RARA-208ENST00000577646 CAMSAP2Q08AD1 1489 aa19.04■□□□□ 0.64
RARA-208ENST00000577646 KDM5CP41229 1560 aa19.04■□□□□ 0.64
RARA-208ENST00000577646 HNRNPMP52272 730 aaKnown RBP eCLIP19.04■□□□□ 0.64
RARA-208ENST00000577646 FRMPD1Q5SYB0 1578 aa19.04■□□□□ 0.64
RARA-208ENST00000577646 AFAP1Q8N556 730 aa19.04■□□□□ 0.64
RARA-208ENST00000577646 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
RARA-208ENST00000577646 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
RARA-208ENST00000577646 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
RARA-208ENST00000577646 ZNF644Q9H582 1327 aaPredicted RBP19.03■□□□□ 0.64
RARA-208ENST00000577646 TRAPPC8Q9Y2L5 1435 aa19.02■□□□□ 0.64
RARA-208ENST00000577646 SYCP2Q9BX26 1530 aa19.02■□□□□ 0.64
RARA-208ENST00000577646 TCOF1Q13428 1488 aaKnown RBP19.02■□□□□ 0.63
RARA-208ENST00000577646 ARHGEF5Q12774 1597 aa19.02■□□□□ 0.63
RARA-208ENST00000577646 TSPY4P0CV99 314 aa19■□□□□ 0.63
RARA-208ENST00000577646 TSPY10P0CW01 314 aa19■□□□□ 0.63
RARA-208ENST00000577646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19■□□□□ 0.63
RARA-208ENST00000577646 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
RARA-208ENST00000577646 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
RARA-208ENST00000577646 ARID4BQ4LE39 1312 aaPredicted RBP19■□□□□ 0.63
RARA-208ENST00000577646 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
RARA-208ENST00000577646 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
RARA-208ENST00000577646 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
RARA-208ENST00000577646 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
RARA-208ENST00000577646 MYT1LQ9UL68 1186 aa18.95■□□□□ 0.62
RARA-208ENST00000577646 ATP10AO60312 1499 aa18.95■□□□□ 0.62
RARA-208ENST00000577646 ARHGEF40Q8TER5 1519 aa18.95■□□□□ 0.62
RARA-208ENST00000577646 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
RARA-208ENST00000577646 ATP7AQ04656 1500 aa18.91■□□□□ 0.62
RARA-208ENST00000577646 REREQ9P2R6 1566 aa18.91■□□□□ 0.62
RARA-208ENST00000577646 RRBP1Q9P2E9 1410 aaKnown RBP18.91■□□□□ 0.62
RARA-208ENST00000577646 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
RARA-208ENST00000577646 SHANK2Q9UPX8 1470 aa18.9■□□□□ 0.62
RARA-208ENST00000577646 INO80Q9ULG1 1556 aaPredicted RBP18.9■□□□□ 0.62
RARA-208ENST00000577646 MAST1Q9Y2H9 1570 aa18.9■□□□□ 0.62
RARA-208ENST00000577646 FAM50AQ14320 339 aaKnown RBP18.9■□□□□ 0.62
RARA-208ENST00000577646 KIDINS220Q9ULH0 1771 aa18.9■□□□□ 0.62
RARA-208ENST00000577646 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
RARA-208ENST00000577646 ABCC5O15440 1437 aa18.89■□□□□ 0.61
RARA-208ENST00000577646 DNMT1P26358 1616 aaKnown RBP18.89■□□□□ 0.61
RARA-208ENST00000577646 DAPK1P53355 1430 aa18.88■□□□□ 0.61
RARA-208ENST00000577646 DIP2CQ9Y2E4 1556 aa18.86■□□□□ 0.61
RARA-208ENST00000577646 AGLP35573 1532 aa18.84■□□□□ 0.61
RARA-208ENST00000577646 ADGBQ8N7X0 1667 aa18.84■□□□□ 0.61
RARA-208ENST00000577646 DHX29Q7Z478 1369 aaKnown RBP18.83■□□□□ 0.61
RARA-208ENST00000577646 ABCA6Q8N139 1617 aa18.83■□□□□ 0.61
RARA-208ENST00000577646 A2MP01023 1474 aa18.83■□□□□ 0.6
RARA-208ENST00000577646 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
RARA-208ENST00000577646 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
RARA-208ENST00000577646 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
RARA-208ENST00000577646 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
RARA-208ENST00000577646 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
RARA-208ENST00000577646 ADGRL2O95490 1459 aa18.8■□□□□ 0.6
RARA-208ENST00000577646 PTPRMP28827 1452 aa18.8■□□□□ 0.6
RARA-208ENST00000577646 MLECQ14165 292 aa18.8■□□□□ 0.6
RARA-208ENST00000577646 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
RARA-208ENST00000577646 ROCK1Q13464 1354 aa18.8■□□□□ 0.6
RARA-208ENST00000577646 NCOA1Q15788 1441 aa18.78■□□□□ 0.6
RARA-208ENST00000577646 DUOX2Q9NRD8 1548 aa18.77■□□□□ 0.6
RARA-208ENST00000577646 MADDQ8WXG6 1647 aa18.76■□□□□ 0.59
RARA-208ENST00000577646 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
RARA-208ENST00000577646 FBXO41Q8TF61 875 aa18.74■□□□□ 0.59
RARA-208ENST00000577646 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
RARA-208ENST00000577646 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
RARA-208ENST00000577646 CHIC2Q9UKJ5 165 aa18.73■□□□□ 0.59
RARA-208ENST00000577646 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
RARA-208ENST00000577646 EIF2AK4Q9P2K8 1649 aaKnown RBP18.71■□□□□ 0.59
RARA-208ENST00000577646 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
RARA-208ENST00000577646 FAM135AQ9P2D6 1515 aa18.7■□□□□ 0.58
RARA-208ENST00000577646 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
RARA-208ENST00000577646 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms