RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 LRRC9Q6ZRR7 1453 aa30.77■■■□□ 2.52
SCO1-202ENST00000577335 GPATCH8Q9UKJ3 1502 aaKnown RBP30.76■■■□□ 2.51
SCO1-202ENST00000577335 PREX2Q70Z35 1606 aa30.76■■■□□ 2.51
SCO1-202ENST00000577335 ADGRL1O94910 1474 aa30.76■■■□□ 2.51
SCO1-202ENST00000577335 RAPGEF3O95398 923 aa30.74■■■□□ 2.51
SCO1-202ENST00000577335 SCAPERQ9BY12 1400 aa30.73■■■□□ 2.51
SCO1-202ENST00000577335 CDC42BPBQ9Y5S2 1711 aa30.7■■■□□ 2.5
SCO1-202ENST00000577335 CFDP1Q9UEE9 299 aaPredicted RBP30.69■■■□□ 2.5
SCO1-202ENST00000577335 NCOA2Q15596 1464 aa30.69■■■□□ 2.5
SCO1-202ENST00000577335 CDC42BPAQ5VT25 1732 aa30.68■■■□□ 2.5
SCO1-202ENST00000577335 SUPT6HQ7KZ85 1726 aaKnown RBP30.68■■■□□ 2.5
SCO1-202ENST00000577335 KANK4Q5T7N3 995 aaPredicted RBP30.68■■■□□ 2.5
SCO1-202ENST00000577335 POGZQ7Z3K3 1410 aa30.66■■■□□ 2.5
SCO1-202ENST00000577335 FRMPD1Q5SYB0 1578 aa30.66■■■□□ 2.5
SCO1-202ENST00000577335 RICTORQ6R327 1708 aa30.62■■■□□ 2.49
SCO1-202ENST00000577335 ZNF518AQ6AHZ1 1483 aa30.61■■■□□ 2.49
SCO1-202ENST00000577335 MAGI2Q86UL8 1455 aa30.61■■■□□ 2.49
SCO1-202ENST00000577335 PLEKHH2Q8IVE3 1493 aa30.61■■■□□ 2.49
SCO1-202ENST00000577335 ZMYM4Q5VZL5 1548 aa30.61■■■□□ 2.49
SCO1-202ENST00000577335 ABCC1P33527 1531 aa30.6■■■□□ 2.49
SCO1-202ENST00000577335 ZNF777Q9ULD5 760 aaPredicted RBP30.6■■■□□ 2.49
SCO1-202ENST00000577335 ITSN2Q9NZM3 1697 aa30.59■■■□□ 2.49
SCO1-202ENST00000577335 KIAA1107Q9UPP5 1409 aa30.59■■■□□ 2.49
SCO1-202ENST00000577335 SAMD9LQ8IVG5 1584 aa30.54■■■□□ 2.48
SCO1-202ENST00000577335 ARHGEF12Q9NZN5 1544 aa30.53■■■□□ 2.48
SCO1-202ENST00000577335 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
SCO1-202ENST00000577335 KDM5CP41229 1560 aa30.51■■■□□ 2.47
SCO1-202ENST00000577335 TRAPPC8Q9Y2L5 1435 aa30.5■■■□□ 2.47
SCO1-202ENST00000577335 ZFYVE16Q7Z3T8 1539 aa30.48■■■□□ 2.47
SCO1-202ENST00000577335 ARHGEF40Q8TER5 1519 aa30.48■■■□□ 2.47
SCO1-202ENST00000577335 MYOM3Q5VTT5 1437 aa30.47■■■□□ 2.47
SCO1-202ENST00000577335 MIA2Q96PC5 1412 aa30.47■■■□□ 2.47
SCO1-202ENST00000577335 MLH3Q9UHC1 1453 aa30.47■■■□□ 2.47
SCO1-202ENST00000577335 HNRNPMP52272 730 aaKnown RBP eCLIP30.47■■■□□ 2.47
SCO1-202ENST00000577335 SYCP2Q9BX26 1530 aa30.47■■■□□ 2.47
SCO1-202ENST00000577335 ZNF644Q9H582 1327 aaPredicted RBP30.46■■■□□ 2.47
SCO1-202ENST00000577335 RSPH4AQ5TD94 716 aa30.44■■■□□ 2.46
SCO1-202ENST00000577335 YEATS2Q9ULM3 1422 aa30.43■■■□□ 2.46
SCO1-202ENST00000577335 CAMSAP2Q08AD1 1489 aa30.41■■■□□ 2.46
SCO1-202ENST00000577335 MBD5Q9P267 1494 aa30.41■■■□□ 2.46
SCO1-202ENST00000577335 HECW2Q9P2P5 1572 aa30.41■■■□□ 2.46
SCO1-202ENST00000577335 MYT1LQ9UL68 1186 aa30.39■■■□□ 2.46
SCO1-202ENST00000577335 SPAG9O60271 1321 aaKnown RBP30.39■■■□□ 2.46
SCO1-202ENST00000577335 ATP10AO60312 1499 aa30.38■■■□□ 2.45
SCO1-202ENST00000577335 KDM4FA0A1W2PPD8 638 aa30.35■■■□□ 2.45
SCO1-202ENST00000577335 C9orf84Q5VXU9 1444 aa30.34■■■□□ 2.45
SCO1-202ENST00000577335 CCDC141Q6ZP82 1450 aa30.31■■■□□ 2.44
SCO1-202ENST00000577335 ARID4BQ4LE39 1312 aaPredicted RBP30.31■■■□□ 2.44
SCO1-202ENST00000577335 FGD6Q6ZV73 1430 aa30.3■■■□□ 2.44
SCO1-202ENST00000577335 ARHGEF5Q12774 1597 aa30.3■■■□□ 2.44
SCO1-202ENST00000577335 RTEL1-TNFRSF6BF6WH68 1400 aa30.3■■■□□ 2.44
SCO1-202ENST00000577335 DIP2CQ9Y2E4 1556 aa30.28■■■□□ 2.44
SCO1-202ENST00000577335 REREQ9P2R6 1566 aa30.28■■■□□ 2.44
SCO1-202ENST00000577335 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
SCO1-202ENST00000577335 KIDINS220Q9ULH0 1771 aa30.27■■■□□ 2.44
SCO1-202ENST00000577335 INO80Q9ULG1 1556 aaPredicted RBP30.25■■■□□ 2.43
SCO1-202ENST00000577335 TSPY4P0CV99 314 aa30.25■■■□□ 2.43
SCO1-202ENST00000577335 TSPY10P0CW01 314 aa30.25■■■□□ 2.43
SCO1-202ENST00000577335 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
SCO1-202ENST00000577335 TCOF1Q13428 1488 aaKnown RBP30.25■■■□□ 2.43
SCO1-202ENST00000577335 ABCA6Q8N139 1617 aa30.24■■■□□ 2.43
SCO1-202ENST00000577335 PTPN23Q9H3S7 1636 aa30.22■■■□□ 2.43
SCO1-202ENST00000577335 AGLP35573 1532 aa30.19■■■□□ 2.42
SCO1-202ENST00000577335 BCORL1Q5H9F3 1711 aa30.17■■■□□ 2.42
SCO1-202ENST00000577335 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
SCO1-202ENST00000577335 A2MP01023 1474 aa30.14■■■□□ 2.42
SCO1-202ENST00000577335 MAST1Q9Y2H9 1570 aa30.13■■■□□ 2.41
SCO1-202ENST00000577335 SIGLEC1Q9BZZ2 1709 aa30.13■■■□□ 2.41
SCO1-202ENST00000577335 PPARGC1BQ86YN6 1023 aaKnown RBP30.12■■■□□ 2.41
SCO1-202ENST00000577335 ABCC5O15440 1437 aa30.11■■■□□ 2.41
SCO1-202ENST00000577335 SHANK2Q9UPX8 1470 aa30.11■■■□□ 2.41
SCO1-202ENST00000577335 DHX29Q7Z478 1369 aaKnown RBP30.09■■■□□ 2.41
SCO1-202ENST00000577335 ADGBQ8N7X0 1667 aa30.08■■■□□ 2.41
SCO1-202ENST00000577335 PLXNC1O60486 1568 aa30.08■■■□□ 2.41
SCO1-202ENST00000577335 DAPK1P53355 1430 aa30.08■■■□□ 2.41
SCO1-202ENST00000577335 MLECQ14165 292 aa30.08■■■□□ 2.41
SCO1-202ENST00000577335 FAM50AQ14320 339 aaKnown RBP30.07■■■□□ 2.4
SCO1-202ENST00000577335 DNMT1P26358 1616 aaKnown RBP30.06■■■□□ 2.4
SCO1-202ENST00000577335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.04■■■□□ 2.4
SCO1-202ENST00000577335 MADDQ8WXG6 1647 aa30.02■■■□□ 2.4
SCO1-202ENST00000577335 PTPRMP28827 1452 aa30.01■■■□□ 2.4
SCO1-202ENST00000577335 CROCC2H7BZ55 1655 aa29.99■■■□□ 2.39
SCO1-202ENST00000577335 PPP6R1Q9UPN7 881 aa29.99■■■□□ 2.39
SCO1-202ENST00000577335 ANKRD30AQ9BXX3 1397 aa29.96■■■□□ 2.39
SCO1-202ENST00000577335 ESF1Q9H501 851 aaKnown RBP29.96■■■□□ 2.39
SCO1-202ENST00000577335 RRBP1Q9P2E9 1410 aaKnown RBP29.95■■■□□ 2.38
SCO1-202ENST00000577335 CNTLNQ9NXG0 1405 aa29.94■■■□□ 2.38
SCO1-202ENST00000577335 KIF15Q9NS87 1388 aa29.93■■■□□ 2.38
SCO1-202ENST00000577335 DUOX2Q9NRD8 1548 aa29.93■■■□□ 2.38
SCO1-202ENST00000577335 KIF3BO15066 747 aa29.92■■■□□ 2.38
SCO1-202ENST00000577335 RIMS1Q86UR5 1692 aaKnown RBP29.91■■■□□ 2.38
SCO1-202ENST00000577335 NCOA1Q15788 1441 aa29.91■■■□□ 2.38
SCO1-202ENST00000577335 FER1L4A9Z1Z3 1794 aa29.91■■■□□ 2.38
SCO1-202ENST00000577335 GGT6Q6P531 493 aa29.91■■■□□ 2.38
SCO1-202ENST00000577335 ADGRL2O95490 1459 aa29.91■■■□□ 2.38
SCO1-202ENST00000577335 RRP7BPQ9NSQ0 103 aa29.9■■■□□ 2.38
SCO1-202ENST00000577335 CHIC2Q9UKJ5 165 aa29.9■■■□□ 2.38
SCO1-202ENST00000577335 ERBINQ96RT1 1412 aa29.87■■■□□ 2.37
SCO1-202ENST00000577335 FAM135AQ9P2D6 1515 aa29.85■■■□□ 2.37
SCO1-202ENST00000577335 EIF2AK4Q9P2K8 1649 aaKnown RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms