RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
NCBP3-207ENST00000577169 ADGRL1O94910 1474 aa24.7■■□□□ 1.55
NCBP3-207ENST00000577169 CDC42BPAQ5VT25 1732 aa24.7■■□□□ 1.54
NCBP3-207ENST00000577169 APLP2Q06481 763 aa24.7■■□□□ 1.54
NCBP3-207ENST00000577169 GPATCH8Q9UKJ3 1502 aaKnown RBP24.7■■□□□ 1.54
NCBP3-207ENST00000577169 CCNB3Q8WWL7 1395 aa24.69■■□□□ 1.54
NCBP3-207ENST00000577169 PREX2Q70Z35 1606 aa24.68■■□□□ 1.54
NCBP3-207ENST00000577169 MAP3K1Q13233 1512 aa24.68■■□□□ 1.54
NCBP3-207ENST00000577169 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
NCBP3-207ENST00000577169 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
NCBP3-207ENST00000577169 CFDP1Q9UEE9 299 aaPredicted RBP24.66■■□□□ 1.54
NCBP3-207ENST00000577169 FRMPD1Q5SYB0 1578 aa24.66■■□□□ 1.54
NCBP3-207ENST00000577169 RICTORQ6R327 1708 aa24.64■■□□□ 1.54
NCBP3-207ENST00000577169 AFAP1Q8N556 730 aa24.62■■□□□ 1.53
NCBP3-207ENST00000577169 SUPT6HQ7KZ85 1726 aaKnown RBP24.61■■□□□ 1.53
NCBP3-207ENST00000577169 NCOA2Q15596 1464 aa24.61■■□□□ 1.53
NCBP3-207ENST00000577169 POGZQ7Z3K3 1410 aa24.6■■□□□ 1.53
NCBP3-207ENST00000577169 ARHGEF12Q9NZN5 1544 aa24.57■■□□□ 1.52
NCBP3-207ENST00000577169 HNRNPMP52272 730 aaKnown RBP eCLIP24.57■■□□□ 1.52
NCBP3-207ENST00000577169 KDM4FA0A1W2PPD8 638 aa24.56■■□□□ 1.52
NCBP3-207ENST00000577169 ZNF644Q9H582 1327 aaPredicted RBP24.55■■□□□ 1.52
NCBP3-207ENST00000577169 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
NCBP3-207ENST00000577169 TRAPPC8Q9Y2L5 1435 aa24.54■■□□□ 1.52
NCBP3-207ENST00000577169 ABCC1P33527 1531 aa24.54■■□□□ 1.52
NCBP3-207ENST00000577169 ZMYM4Q5VZL5 1548 aa24.53■■□□□ 1.52
NCBP3-207ENST00000577169 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
NCBP3-207ENST00000577169 ZNF518AQ6AHZ1 1483 aa24.52■■□□□ 1.52
NCBP3-207ENST00000577169 ITSN2Q9NZM3 1697 aa24.52■■□□□ 1.52
NCBP3-207ENST00000577169 YEATS2Q9ULM3 1422 aa24.52■■□□□ 1.52
NCBP3-207ENST00000577169 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
NCBP3-207ENST00000577169 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
NCBP3-207ENST00000577169 KIAA1107Q9UPP5 1409 aa24.49■■□□□ 1.51
NCBP3-207ENST00000577169 PLEKHH2Q8IVE3 1493 aa24.49■■□□□ 1.51
NCBP3-207ENST00000577169 ZFYVE16Q7Z3T8 1539 aa24.48■■□□□ 1.51
NCBP3-207ENST00000577169 SYCP2Q9BX26 1530 aa24.47■■□□□ 1.51
NCBP3-207ENST00000577169 KDM5CP41229 1560 aa24.46■■□□□ 1.51
NCBP3-207ENST00000577169 ARID4BQ4LE39 1312 aaPredicted RBP24.46■■□□□ 1.51
NCBP3-207ENST00000577169 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
NCBP3-207ENST00000577169 ATP10AO60312 1499 aa24.43■■□□□ 1.5
NCBP3-207ENST00000577169 MLH3Q9UHC1 1453 aa24.43■■□□□ 1.5
NCBP3-207ENST00000577169 SPAG9O60271 1321 aaKnown RBP24.41■■□□□ 1.5
NCBP3-207ENST00000577169 MYOM3Q5VTT5 1437 aa24.41■■□□□ 1.5
NCBP3-207ENST00000577169 MBD5Q9P267 1494 aa24.4■■□□□ 1.5
NCBP3-207ENST00000577169 HECW2Q9P2P5 1572 aa24.4■■□□□ 1.5
NCBP3-207ENST00000577169 CAMSAP2Q08AD1 1489 aa24.39■■□□□ 1.5
NCBP3-207ENST00000577169 MIA2Q96PC5 1412 aa24.37■■□□□ 1.49
NCBP3-207ENST00000577169 RSPH4AQ5TD94 716 aa24.37■■□□□ 1.49
NCBP3-207ENST00000577169 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
NCBP3-207ENST00000577169 KIDINS220Q9ULH0 1771 aa24.37■■□□□ 1.49
NCBP3-207ENST00000577169 C9orf84Q5VXU9 1444 aa24.35■■□□□ 1.49
NCBP3-207ENST00000577169 SIGLEC1Q9BZZ2 1709 aa24.34■■□□□ 1.49
NCBP3-207ENST00000577169 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.49
NCBP3-207ENST00000577169 MLECQ14165 292 aa24.33■■□□□ 1.49
NCBP3-207ENST00000577169 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
NCBP3-207ENST00000577169 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
NCBP3-207ENST00000577169 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
NCBP3-207ENST00000577169 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
NCBP3-207ENST00000577169 CCDC141Q6ZP82 1450 aa24.29■■□□□ 1.48
NCBP3-207ENST00000577169 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
NCBP3-207ENST00000577169 ADAMTSL3P82987 1691 aa24.28■■□□□ 1.48
NCBP3-207ENST00000577169 RTEL1-TNFRSF6BF6WH68 1400 aa24.27■■□□□ 1.48
NCBP3-207ENST00000577169 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
NCBP3-207ENST00000577169 ARHGEF5Q12774 1597 aa24.27■■□□□ 1.48
NCBP3-207ENST00000577169 INO80Q9ULG1 1556 aaPredicted RBP24.26■■□□□ 1.47
NCBP3-207ENST00000577169 PTPN23Q9H3S7 1636 aa24.26■■□□□ 1.47
NCBP3-207ENST00000577169 REREQ9P2R6 1566 aa24.25■■□□□ 1.47
NCBP3-207ENST00000577169 TCOF1Q13428 1488 aaKnown RBP24.21■■□□□ 1.47
NCBP3-207ENST00000577169 AGLP35573 1532 aa24.2■■□□□ 1.47
NCBP3-207ENST00000577169 A2MP01023 1474 aa24.2■■□□□ 1.47
NCBP3-207ENST00000577169 FAM50AQ14320 339 aaKnown RBP24.2■■□□□ 1.46
NCBP3-207ENST00000577169 MADDQ8WXG6 1647 aa24.2■■□□□ 1.46
NCBP3-207ENST00000577169 ABCC5O15440 1437 aa24.17■■□□□ 1.46
NCBP3-207ENST00000577169 DHX29Q7Z478 1369 aaKnown RBP24.16■■□□□ 1.46
NCBP3-207ENST00000577169 ADGBQ8N7X0 1667 aa24.16■■□□□ 1.46
NCBP3-207ENST00000577169 PTPRMP28827 1452 aa24.16■■□□□ 1.46
NCBP3-207ENST00000577169 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
NCBP3-207ENST00000577169 MAST1Q9Y2H9 1570 aa24.13■■□□□ 1.45
NCBP3-207ENST00000577169 DAPK1P53355 1430 aa24.13■■□□□ 1.45
NCBP3-207ENST00000577169 PLPPR3Q6T4P5 718 aa24.13■■□□□ 1.45
NCBP3-207ENST00000577169 GGT6Q6P531 493 aa24.12■■□□□ 1.45
NCBP3-207ENST00000577169 CHIC2Q9UKJ5 165 aa24.12■■□□□ 1.45
NCBP3-207ENST00000577169 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
NCBP3-207ENST00000577169 FER1L4A9Z1Z3 1794 aa24.11■■□□□ 1.45
NCBP3-207ENST00000577169 DNMT1P26358 1616 aaKnown RBP24.1■■□□□ 1.45
NCBP3-207ENST00000577169 KIF3BO15066 747 aa24.1■■□□□ 1.45
NCBP3-207ENST00000577169 ESF1Q9H501 851 aaKnown RBP24.1■■□□□ 1.45
NCBP3-207ENST00000577169 RRP7BPQ9NSQ0 103 aa24.08■■□□□ 1.45
NCBP3-207ENST00000577169 CEBPAP49715 358 aaPredicted RBP24.07■■□□□ 1.44
NCBP3-207ENST00000577169 CROCC2H7BZ55 1655 aa24.06■■□□□ 1.44
NCBP3-207ENST00000577169 SHANK2Q9UPX8 1470 aa24.06■■□□□ 1.44
NCBP3-207ENST00000577169 PPP6R1Q9UPN7 881 aa24.02■■□□□ 1.44
NCBP3-207ENST00000577169 ANKRD30AQ9BXX3 1397 aa24.01■■□□□ 1.43
NCBP3-207ENST00000577169 KIF15Q9NS87 1388 aa24.01■■□□□ 1.43
NCBP3-207ENST00000577169 ITGAEP38570 1179 aa24■■□□□ 1.43
NCBP3-207ENST00000577169 NCOA1Q15788 1441 aa23.99■■□□□ 1.43
NCBP3-207ENST00000577169 DUOX2Q9NRD8 1548 aa23.99■■□□□ 1.43
NCBP3-207ENST00000577169 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.98■■□□□ 1.43
NCBP3-207ENST00000577169 PTPRKQ15262 1439 aa23.98■■□□□ 1.43
NCBP3-207ENST00000577169 CNTLNQ9NXG0 1405 aa23.98■■□□□ 1.43
NCBP3-207ENST00000577169 ZMYM3Q14202 1370 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms