RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 LRRIQ1Q96JM4 1722 aa23.16■■□□□ 1.3
CDC27-217ENST00000575483 ILDR1Q86SU0 546 aaPredicted RBP23.13■■□□□ 1.29
CDC27-217ENST00000575483 PLCH2O75038 1416 aa23.13■■□□□ 1.29
CDC27-217ENST00000575483 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
CDC27-217ENST00000575483 KIF14Q15058 1648 aa23.11■■□□□ 1.29
CDC27-217ENST00000575483 MYO5CQ9NQX4 1742 aa23.11■■□□□ 1.29
CDC27-217ENST00000575483 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
CDC27-217ENST00000575483 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
CDC27-217ENST00000575483 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
CDC27-217ENST00000575483 POGZQ7Z3K3 1410 aa23.08■■□□□ 1.29
CDC27-217ENST00000575483 MAGI2Q86UL8 1455 aa23.08■■□□□ 1.29
CDC27-217ENST00000575483 RIMS1Q86UR5 1692 aaKnown RBP23.08■■□□□ 1.29
CDC27-217ENST00000575483 SCAPERQ9BY12 1400 aa23.05■■□□□ 1.28
CDC27-217ENST00000575483 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
CDC27-217ENST00000575483 PCF11O94913 1555 aaKnown RBP23.03■■□□□ 1.28
CDC27-217ENST00000575483 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
CDC27-217ENST00000575483 ARID4BQ4LE39 1312 aaPredicted RBP23.03■■□□□ 1.28
CDC27-217ENST00000575483 NCBP3Q53F19 620 aaKnown RBP22.99■■□□□ 1.27
CDC27-217ENST00000575483 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
CDC27-217ENST00000575483 KDM5CP41229 1560 aa22.98■■□□□ 1.27
CDC27-217ENST00000575483 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
CDC27-217ENST00000575483 FER1L4A9Z1Z3 1794 aa22.96■■□□□ 1.27
CDC27-217ENST00000575483 CNKSR2Q8WXI2 1034 aa22.96■■□□□ 1.27
CDC27-217ENST00000575483 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
CDC27-217ENST00000575483 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
CDC27-217ENST00000575483 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
CDC27-217ENST00000575483 DMRT2Q9Y5R5 561 aa22.95■■□□□ 1.26
CDC27-217ENST00000575483 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
CDC27-217ENST00000575483 ARHGEF12Q9NZN5 1544 aa22.94■■□□□ 1.26
CDC27-217ENST00000575483 PREX2Q70Z35 1606 aa22.93■■□□□ 1.26
CDC27-217ENST00000575483 ATP10AO60312 1499 aa22.93■■□□□ 1.26
CDC27-217ENST00000575483 ZNF518AQ6AHZ1 1483 aa22.93■■□□□ 1.26
CDC27-217ENST00000575483 CLIP1P30622 1438 aa22.93■■□□□ 1.26
CDC27-217ENST00000575483 CCDC18Q5T9S5 1454 aa22.92■■□□□ 1.26
CDC27-217ENST00000575483 C9orf84Q5VXU9 1444 aa22.91■■□□□ 1.26
CDC27-217ENST00000575483 KCNA4P22459 653 aa22.91■■□□□ 1.26
CDC27-217ENST00000575483 DIP2CQ9Y2E4 1556 aa22.89■■□□□ 1.25
CDC27-217ENST00000575483 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
CDC27-217ENST00000575483 ABCC1P33527 1531 aa22.88■■□□□ 1.25
CDC27-217ENST00000575483 REREQ9P2R6 1566 aa22.88■■□□□ 1.25
CDC27-217ENST00000575483 FYCO1Q9BQS8 1478 aa22.87■■□□□ 1.25
CDC27-217ENST00000575483 ABCA6Q8N139 1617 aa22.86■■□□□ 1.25
CDC27-217ENST00000575483 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
CDC27-217ENST00000575483 AFAP1Q8N556 730 aa22.84■■□□□ 1.25
CDC27-217ENST00000575483 MLH3Q9UHC1 1453 aa22.84■■□□□ 1.25
CDC27-217ENST00000575483 MLECQ14165 292 aa22.82■■□□□ 1.24
CDC27-217ENST00000575483 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
CDC27-217ENST00000575483 KIDINS220Q9ULH0 1771 aa22.79■■□□□ 1.24
CDC27-217ENST00000575483 PREX1Q8TCU6 1659 aa22.79■■□□□ 1.24
CDC27-217ENST00000575483 HSPA2P54652 639 aa22.79■■□□□ 1.24
CDC27-217ENST00000575483 AGLP35573 1532 aa22.77■■□□□ 1.24
CDC27-217ENST00000575483 SAMD9LQ8IVG5 1584 aa22.76■■□□□ 1.23
CDC27-217ENST00000575483 FBXO41Q8TF61 875 aa22.74■■□□□ 1.23
CDC27-217ENST00000575483 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
CDC27-217ENST00000575483 C3P01024 1663 aa22.71■■□□□ 1.23
CDC27-217ENST00000575483 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.23
CDC27-217ENST00000575483 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
CDC27-217ENST00000575483 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
CDC27-217ENST00000575483 STRCQ7RTU9 1775 aa22.68■■□□□ 1.22
CDC27-217ENST00000575483 INO80Q9ULG1 1556 aaPredicted RBP22.65■■□□□ 1.22
CDC27-217ENST00000575483 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
CDC27-217ENST00000575483 PLXNC1O60486 1568 aa22.62■■□□□ 1.21
CDC27-217ENST00000575483 MYT1LQ9UL68 1186 aa22.61■■□□□ 1.21
CDC27-217ENST00000575483 ATP7AQ04656 1500 aa22.61■■□□□ 1.21
CDC27-217ENST00000575483 TIAM1Q13009 1591 aa22.6■■□□□ 1.21
CDC27-217ENST00000575483 UHRF1BP1Q6BDS2 1440 aa22.6■■□□□ 1.21
CDC27-217ENST00000575483 MROH2AA6NES4 1674 aa22.6■■□□□ 1.21
CDC27-217ENST00000575483 PLEKHH2Q8IVE3 1493 aa22.59■■□□□ 1.21
CDC27-217ENST00000575483 NPM3O75607 178 aaKnown RBP22.58■■□□□ 1.21
CDC27-217ENST00000575483 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
CDC27-217ENST00000575483 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
CDC27-217ENST00000575483 ZNF777Q9ULD5 760 aaPredicted RBP22.57■■□□□ 1.2
CDC27-217ENST00000575483 EHBP1L1Q8N3D4 1523 aa22.57■■□□□ 1.2
CDC27-217ENST00000575483 CNTLNQ9NXG0 1405 aa22.57■■□□□ 1.2
CDC27-217ENST00000575483 HNRNPMP52272 730 aaKnown RBP eCLIP22.56■■□□□ 1.2
CDC27-217ENST00000575483 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
CDC27-217ENST00000575483 CCNB3Q8WWL7 1395 aa22.55■■□□□ 1.2
CDC27-217ENST00000575483 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
CDC27-217ENST00000575483 RNF216Q9NWF9 866 aaPredicted RBP22.54■■□□□ 1.2
CDC27-217ENST00000575483 CEP162Q5TB80 1403 aa22.54■■□□□ 1.2
CDC27-217ENST00000575483 CFDP1Q9UEE9 299 aaPredicted RBP22.53■■□□□ 1.2
CDC27-217ENST00000575483 MBD5Q9P267 1494 aa22.53■■□□□ 1.2
CDC27-217ENST00000575483 CERKQ8TCT0 537 aa22.51■■□□□ 1.19
CDC27-217ENST00000575483 A2MP01023 1474 aa22.51■■□□□ 1.19
CDC27-217ENST00000575483 CLTCQ00610 1675 aaKnown RBP22.5■■□□□ 1.19
CDC27-217ENST00000575483 ADGBQ8N7X0 1667 aa22.5■■□□□ 1.19
CDC27-217ENST00000575483 NPATQ14207 1427 aa22.49■■□□□ 1.19
CDC27-217ENST00000575483 ZNF644Q9H582 1327 aaPredicted RBP22.48■■□□□ 1.19
CDC27-217ENST00000575483 HOXD11P31277 338 aaPredicted RBP22.46■■□□□ 1.19
CDC27-217ENST00000575483 PTPRTO14522 1441 aa22.46■■□□□ 1.19
CDC27-217ENST00000575483 ESF1Q9H501 851 aaKnown RBP22.45■■□□□ 1.18
CDC27-217ENST00000575483 ZMYM3Q14202 1370 aa22.45■■□□□ 1.18
CDC27-217ENST00000575483 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
CDC27-217ENST00000575483 ZNF142P52746 1687 aaPredicted RBP22.44■■□□□ 1.18
CDC27-217ENST00000575483 MYO3AQ8NEV4 1616 aa22.42■■□□□ 1.18
CDC27-217ENST00000575483 RTEL1-TNFRSF6BF6WH68 1400 aa22.42■■□□□ 1.18
CDC27-217ENST00000575483 NCOA2Q15596 1464 aa22.41■■□□□ 1.18
CDC27-217ENST00000575483 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
CDC27-217ENST00000575483 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
CDC27-217ENST00000575483 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms