RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
NPLOC4-216ENST00000574344 ADAMTSL3P82987 1691 aa15.63■□□□□ 0.09
NPLOC4-216ENST00000574344 ZFYVE16Q7Z3T8 1539 aa15.63■□□□□ 0.09
NPLOC4-216ENST00000574344 PREX2Q70Z35 1606 aa15.62■□□□□ 0.09
NPLOC4-216ENST00000574344 MADDQ8WXG6 1647 aa15.61■□□□□ 0.09
NPLOC4-216ENST00000574344 SCAPERQ9BY12 1400 aa15.61■□□□□ 0.09
NPLOC4-216ENST00000574344 HECW2Q9P2P5 1572 aa15.61■□□□□ 0.09
NPLOC4-216ENST00000574344 POGZQ7Z3K3 1410 aa15.6■□□□□ 0.09
NPLOC4-216ENST00000574344 CDC42BPAQ5VT25 1732 aa15.6■□□□□ 0.09
NPLOC4-216ENST00000574344 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
NPLOC4-216ENST00000574344 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
NPLOC4-216ENST00000574344 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
NPLOC4-216ENST00000574344 YEATS2Q9ULM3 1422 aa15.57■□□□□ 0.08
NPLOC4-216ENST00000574344 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
NPLOC4-216ENST00000574344 ITSN2Q9NZM3 1697 aa15.57■□□□□ 0.08
NPLOC4-216ENST00000574344 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
NPLOC4-216ENST00000574344 PTPRMP28827 1452 aa15.55■□□□□ 0.08
NPLOC4-216ENST00000574344 ZNF518AQ6AHZ1 1483 aa15.55■□□□□ 0.08
NPLOC4-216ENST00000574344 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
NPLOC4-216ENST00000574344 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
NPLOC4-216ENST00000574344 KDM5CP41229 1560 aa15.53■□□□□ 0.08
NPLOC4-216ENST00000574344 ABCC1P33527 1531 aa15.53■□□□□ 0.08
NPLOC4-216ENST00000574344 C9orf84Q5VXU9 1444 aa15.5■□□□□ 0.07
NPLOC4-216ENST00000574344 ATP10AO60312 1499 aa15.49■□□□□ 0.07
NPLOC4-216ENST00000574344 MLECQ14165 292 aa15.49■□□□□ 0.07
NPLOC4-216ENST00000574344 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
NPLOC4-216ENST00000574344 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
NPLOC4-216ENST00000574344 SAMD9LQ8IVG5 1584 aa15.48■□□□□ 0.07
NPLOC4-216ENST00000574344 DIP2CQ9Y2E4 1556 aa15.48■□□□□ 0.07
NPLOC4-216ENST00000574344 EHBP1L1Q8N3D4 1523 aa15.48■□□□□ 0.07
NPLOC4-216ENST00000574344 PLPPR3Q6T4P5 718 aa15.47■□□□□ 0.07
NPLOC4-216ENST00000574344 AFAP1Q8N556 730 aa15.46■□□□□ 0.07
NPLOC4-216ENST00000574344 ZNF777Q9ULD5 760 aaPredicted RBP15.46■□□□□ 0.07
NPLOC4-216ENST00000574344 SYCP2Q9BX26 1530 aa15.46■□□□□ 0.07
NPLOC4-216ENST00000574344 KIDINS220Q9ULH0 1771 aa15.44■□□□□ 0.06
NPLOC4-216ENST00000574344 TRAPPC8Q9Y2L5 1435 aa15.44■□□□□ 0.06
NPLOC4-216ENST00000574344 ARHGEF12Q9NZN5 1544 aa15.44■□□□□ 0.06
NPLOC4-216ENST00000574344 CCNB3Q8WWL7 1395 aa15.44■□□□□ 0.06
NPLOC4-216ENST00000574344 GPATCH8Q9UKJ3 1502 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-216ENST00000574344 TIAM1Q13009 1591 aa15.43■□□□□ 0.06
NPLOC4-216ENST00000574344 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
NPLOC4-216ENST00000574344 REREQ9P2R6 1566 aa15.42■□□□□ 0.06
NPLOC4-216ENST00000574344 MLH3Q9UHC1 1453 aa15.42■□□□□ 0.06
NPLOC4-216ENST00000574344 PLEKHH2Q8IVE3 1493 aa15.4■□□□□ 0.06
NPLOC4-216ENST00000574344 LOC105371045A0A1W2PR82 267 aa15.39■□□□□ 0.05
NPLOC4-216ENST00000574344 CFDP1Q9UEE9 299 aaPredicted RBP15.39■□□□□ 0.05
NPLOC4-216ENST00000574344 LMTK3Q96Q04 1460 aa15.38■□□□□ 0.05
NPLOC4-216ENST00000574344 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
NPLOC4-216ENST00000574344 ATP7AQ04656 1500 aa15.37■□□□□ 0.05
NPLOC4-216ENST00000574344 INO80Q9ULG1 1556 aaPredicted RBP15.36■□□□□ 0.05
NPLOC4-216ENST00000574344 VPS8Q8N3P4 1428 aa15.36■□□□□ 0.05
NPLOC4-216ENST00000574344 AGLP35573 1532 aa15.35■□□□□ 0.05
NPLOC4-216ENST00000574344 HNRNPMP52272 730 aaKnown RBP eCLIP15.35■□□□□ 0.05
NPLOC4-216ENST00000574344 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
NPLOC4-216ENST00000574344 C3P01024 1663 aa15.35■□□□□ 0.05
NPLOC4-216ENST00000574344 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
NPLOC4-216ENST00000574344 KIAA1107Q9UPP5 1409 aa15.34■□□□□ 0.05
NPLOC4-216ENST00000574344 ESF1Q9H501 851 aaKnown RBP15.33■□□□□ 0.04
NPLOC4-216ENST00000574344 NCOA2Q15596 1464 aa15.33■□□□□ 0.04
NPLOC4-216ENST00000574344 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
NPLOC4-216ENST00000574344 MROH2AA6NES4 1674 aa15.29■□□□□ 0.04
NPLOC4-216ENST00000574344 CAMSAP2Q08AD1 1489 aa15.29■□□□□ 0.04
NPLOC4-216ENST00000574344 CEBPAP49715 358 aaPredicted RBP15.29■□□□□ 0.04
NPLOC4-216ENST00000574344 HSPA2P54652 639 aa15.29■□□□□ 0.04
NPLOC4-216ENST00000574344 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
NPLOC4-216ENST00000574344 PLXNC1O60486 1568 aa15.28■□□□□ 0.04
NPLOC4-216ENST00000574344 LRRC9Q6ZRR7 1453 aa15.28■□□□□ 0.04
NPLOC4-216ENST00000574344 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
NPLOC4-216ENST00000574344 A2MP01023 1474 aa15.27■□□□□ 0.04
NPLOC4-216ENST00000574344 CCDC141Q6ZP82 1450 aa15.26■□□□□ 0.03
NPLOC4-216ENST00000574344 UHRF1BP1Q6BDS2 1440 aa15.26■□□□□ 0.03
NPLOC4-216ENST00000574344 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
NPLOC4-216ENST00000574344 MBD5Q9P267 1494 aa15.25■□□□□ 0.03
NPLOC4-216ENST00000574344 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
NPLOC4-216ENST00000574344 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
NPLOC4-216ENST00000574344 ARHGEF5Q12774 1597 aa15.23■□□□□ 0.03
NPLOC4-216ENST00000574344 RTEL1-TNFRSF6BF6WH68 1400 aa15.21■□□□□ 0.03
NPLOC4-216ENST00000574344 APLP2Q06481 763 aa15.21■□□□□ 0.03
NPLOC4-216ENST00000574344 GGT6Q6P531 493 aa15.2■□□□□ 0.02
NPLOC4-216ENST00000574344 STRCQ7RTU9 1775 aa15.19■□□□□ 0.02
NPLOC4-216ENST00000574344 KANK4Q5T7N3 995 aaPredicted RBP15.18■□□□□ 0.02
NPLOC4-216ENST00000574344 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
NPLOC4-216ENST00000574344 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
NPLOC4-216ENST00000574344 RSPH4AQ5TD94 716 aa15.17■□□□□ 0.02
NPLOC4-216ENST00000574344 CROCC2H7BZ55 1655 aa15.16■□□□□ 0.02
NPLOC4-216ENST00000574344 ZNF142P52746 1687 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-216ENST00000574344 ZMYM3Q14202 1370 aa15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 DHX29Q7Z478 1369 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 NPATQ14207 1427 aa15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
NPLOC4-216ENST00000574344 PTPN23Q9H3S7 1636 aa15.14■□□□□ 0.01
NPLOC4-216ENST00000574344 MIA2Q96PC5 1412 aa15.14■□□□□ 0.01
NPLOC4-216ENST00000574344 KDM5DQ9BY66 1539 aa15.12■□□□□ 0.01
NPLOC4-216ENST00000574344 KIF3BO15066 747 aa15.12■□□□□ 0.01
NPLOC4-216ENST00000574344 CAMSAP1Q5T5Y3 1602 aa15.11■□□□□ 0.01
NPLOC4-216ENST00000574344 FAM135AQ9P2D6 1515 aa15.11■□□□□ 0.01
NPLOC4-216ENST00000574344 CEP170BQ9Y4F5 1589 aaPredicted RBP15.11■□□□□ 0.01
NPLOC4-216ENST00000574344 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms