RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 TROQ12816 1431 aaPredicted RBP18.31■□□□□ 0.52
ABR-220ENST00000573325 UBTFP17480 764 aaKnown RBP18.3■□□□□ 0.52
ABR-220ENST00000573325 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
ABR-220ENST00000573325 ARID4BQ4LE39 1312 aaPredicted RBP18.27■□□□□ 0.52
ABR-220ENST00000573325 EHMT2Q96KQ7 1210 aa18.27■□□□□ 0.52
ABR-220ENST00000573325 KDM5CP41229 1560 aa18.26■□□□□ 0.51
ABR-220ENST00000573325 RIMS1Q86UR5 1692 aaKnown RBP18.26■□□□□ 0.51
ABR-220ENST00000573325 ATP10AO60312 1499 aa18.26■□□□□ 0.51
ABR-220ENST00000573325 EFCAB2Q5VUJ9 269 aa18.25■□□□□ 0.51
ABR-220ENST00000573325 AFAP1Q8N556 730 aa18.23■□□□□ 0.51
ABR-220ENST00000573325 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
ABR-220ENST00000573325 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.51
ABR-220ENST00000573325 C9orf84Q5VXU9 1444 aa18.21■□□□□ 0.51
ABR-220ENST00000573325 HSPA2P54652 639 aa18.2■□□□□ 0.5
ABR-220ENST00000573325 ZNF518AQ6AHZ1 1483 aa18.2■□□□□ 0.5
ABR-220ENST00000573325 FBXO41Q8TF61 875 aa18.19■□□□□ 0.5
ABR-220ENST00000573325 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
ABR-220ENST00000573325 TRAPPC8Q9Y2L5 1435 aa18.19■□□□□ 0.5
ABR-220ENST00000573325 MLH3Q9UHC1 1453 aa18.19■□□□□ 0.5
ABR-220ENST00000573325 CDC42BPBQ9Y5S2 1711 aa18.18■□□□□ 0.5
ABR-220ENST00000573325 REREQ9P2R6 1566 aa18.17■□□□□ 0.5
ABR-220ENST00000573325 DIP2CQ9Y2E4 1556 aa18.17■□□□□ 0.5
ABR-220ENST00000573325 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
ABR-220ENST00000573325 ABCC1P33527 1531 aa18.15■□□□□ 0.5
ABR-220ENST00000573325 ARHGAP5Q13017 1502 aa18.15■□□□□ 0.5
ABR-220ENST00000573325 MLECQ14165 292 aa18.14■□□□□ 0.49
ABR-220ENST00000573325 CLIP1P30622 1438 aa18.14■□□□□ 0.49
ABR-220ENST00000573325 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
ABR-220ENST00000573325 FER1L4A9Z1Z3 1794 aa18.13■□□□□ 0.49
ABR-220ENST00000573325 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
ABR-220ENST00000573325 AGLP35573 1532 aa18.13■□□□□ 0.49
ABR-220ENST00000573325 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
ABR-220ENST00000573325 CEBPAP49715 358 aaPredicted RBP18.12■□□□□ 0.49
ABR-220ENST00000573325 FYCO1Q9BQS8 1478 aa18.11■□□□□ 0.49
ABR-220ENST00000573325 GPATCH8Q9UKJ3 1502 aaKnown RBP18.09■□□□□ 0.49
ABR-220ENST00000573325 KIDINS220Q9ULH0 1771 aa18.08■□□□□ 0.48
ABR-220ENST00000573325 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
ABR-220ENST00000573325 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
ABR-220ENST00000573325 SAMD9LQ8IVG5 1584 aa18.05■□□□□ 0.48
ABR-220ENST00000573325 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
ABR-220ENST00000573325 PLPPR3Q6T4P5 718 aa18.03■□□□□ 0.48
ABR-220ENST00000573325 PREX1Q8TCU6 1659 aa18.02■□□□□ 0.47
ABR-220ENST00000573325 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
ABR-220ENST00000573325 SETD1BQ9UPS6 1966 aaKnown RBP18■□□□□ 0.47
ABR-220ENST00000573325 CERKQ8TCT0 537 aa17.99■□□□□ 0.47
ABR-220ENST00000573325 C3P01024 1663 aa17.99■□□□□ 0.47
ABR-220ENST00000573325 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
ABR-220ENST00000573325 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
ABR-220ENST00000573325 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
ABR-220ENST00000573325 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
ABR-220ENST00000573325 UHRF1BP1Q6BDS2 1440 aa17.95■□□□□ 0.46
ABR-220ENST00000573325 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
ABR-220ENST00000573325 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
ABR-220ENST00000573325 PTPRTO14522 1441 aa17.92■□□□□ 0.46
ABR-220ENST00000573325 CNTLNQ9NXG0 1405 aa17.92■□□□□ 0.46
ABR-220ENST00000573325 SPAG9O60271 1321 aaKnown RBP17.92■□□□□ 0.46
ABR-220ENST00000573325 NPATQ14207 1427 aa17.91■□□□□ 0.46
ABR-220ENST00000573325 ATP7AQ04656 1500 aa17.91■□□□□ 0.46
ABR-220ENST00000573325 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
ABR-220ENST00000573325 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
ABR-220ENST00000573325 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
ABR-220ENST00000573325 ZMYM3Q14202 1370 aa17.9■□□□□ 0.46
ABR-220ENST00000573325 PLEKHH2Q8IVE3 1493 aa17.89■□□□□ 0.45
ABR-220ENST00000573325 CFDP1Q9UEE9 299 aaPredicted RBP17.89■□□□□ 0.45
ABR-220ENST00000573325 ZNF777Q9ULD5 760 aaPredicted RBP17.89■□□□□ 0.45
ABR-220ENST00000573325 CEP162Q5TB80 1403 aa17.89■□□□□ 0.45
ABR-220ENST00000573325 A2MP01023 1474 aa17.88■□□□□ 0.45
ABR-220ENST00000573325 CCNB3Q8WWL7 1395 aa17.88■□□□□ 0.45
ABR-220ENST00000573325 MROH2AA6NES4 1674 aa17.87■□□□□ 0.45
ABR-220ENST00000573325 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
ABR-220ENST00000573325 MYT1LQ9UL68 1186 aa17.86■□□□□ 0.45
ABR-220ENST00000573325 MTUS2Q5JR59 1369 aa17.85■□□□□ 0.45
ABR-220ENST00000573325 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
ABR-220ENST00000573325 EHBP1L1Q8N3D4 1523 aa17.83■□□□□ 0.45
ABR-220ENST00000573325 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.45
ABR-220ENST00000573325 SUPT6HQ7KZ85 1726 aaKnown RBP17.81■□□□□ 0.44
ABR-220ENST00000573325 TCOF1Q13428 1488 aaKnown RBP17.8■□□□□ 0.44
ABR-220ENST00000573325 DHX29Q7Z478 1369 aaKnown RBP17.79■□□□□ 0.44
ABR-220ENST00000573325 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
ABR-220ENST00000573325 CAMSAP1Q5T5Y3 1602 aa17.79■□□□□ 0.44
ABR-220ENST00000573325 NCOA2Q15596 1464 aa17.78■□□□□ 0.44
ABR-220ENST00000573325 CLTCQ00610 1675 aaKnown RBP17.77■□□□□ 0.44
ABR-220ENST00000573325 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
ABR-220ENST00000573325 ZNF142P52746 1687 aaPredicted RBP17.77■□□□□ 0.43
ABR-220ENST00000573325 ADGBQ8N7X0 1667 aa17.75■□□□□ 0.43
ABR-220ENST00000573325 ESF1Q9H501 851 aaKnown RBP17.75■□□□□ 0.43
ABR-220ENST00000573325 MYO3AQ8NEV4 1616 aa17.75■□□□□ 0.43
ABR-220ENST00000573325 NCKAP5LQ9HCH0 1330 aa17.74■□□□□ 0.43
ABR-220ENST00000573325 GGT6Q6P531 493 aa17.74■□□□□ 0.43
ABR-220ENST00000573325 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
ABR-220ENST00000573325 CAMSAP2Q08AD1 1489 aa17.73■□□□□ 0.43
ABR-220ENST00000573325 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
ABR-220ENST00000573325 CEP170BQ9Y4F5 1589 aaPredicted RBP17.73■□□□□ 0.43
ABR-220ENST00000573325 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
ABR-220ENST00000573325 FBXO31Q5XUX0 539 aaPredicted RBP17.7■□□□□ 0.42
ABR-220ENST00000573325 ARHGEF5Q12774 1597 aa17.7■□□□□ 0.42
ABR-220ENST00000573325 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
ABR-220ENST00000573325 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
ABR-220ENST00000573325 LRRC9Q6ZRR7 1453 aa17.69■□□□□ 0.42
ABR-220ENST00000573325 DNMT1P26358 1616 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms