RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 ZMYM4Q5VZL5 1548 aa25.88■■□□□ 1.73
NDE1-205ENST00000572756 ARHGAP5Q13017 1502 aa25.88■■□□□ 1.73
NDE1-205ENST00000572756 CDC42BPAQ5VT25 1732 aa25.87■■□□□ 1.73
NDE1-205ENST00000572756 SCAPERQ9BY12 1400 aa25.87■■□□□ 1.73
NDE1-205ENST00000572756 ARHGEF40Q8TER5 1519 aa25.85■■□□□ 1.73
NDE1-205ENST00000572756 POGZQ7Z3K3 1410 aa25.85■■□□□ 1.73
NDE1-205ENST00000572756 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
NDE1-205ENST00000572756 MTUS2Q5JR59 1369 aa25.8■■□□□ 1.72
NDE1-205ENST00000572756 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
NDE1-205ENST00000572756 EHBP1L1Q8N3D4 1523 aa25.78■■□□□ 1.72
NDE1-205ENST00000572756 GPATCH8Q9UKJ3 1502 aaKnown RBP25.78■■□□□ 1.72
NDE1-205ENST00000572756 ABCC1P33527 1531 aa25.77■■□□□ 1.72
NDE1-205ENST00000572756 ZFYVE16Q7Z3T8 1539 aa25.77■■□□□ 1.72
NDE1-205ENST00000572756 KDM5CP41229 1560 aa25.75■■□□□ 1.71
NDE1-205ENST00000572756 ZNF518AQ6AHZ1 1483 aa25.75■■□□□ 1.71
NDE1-205ENST00000572756 YEATS2Q9ULM3 1422 aa25.75■■□□□ 1.71
NDE1-205ENST00000572756 ITSN2Q9NZM3 1697 aa25.74■■□□□ 1.71
NDE1-205ENST00000572756 TIAM1Q13009 1591 aa25.73■■□□□ 1.71
NDE1-205ENST00000572756 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
NDE1-205ENST00000572756 SAMD9LQ8IVG5 1584 aa25.71■■□□□ 1.71
NDE1-205ENST00000572756 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
NDE1-205ENST00000572756 ADAMTSL3P82987 1691 aa25.71■■□□□ 1.71
NDE1-205ENST00000572756 BCORL1Q5H9F3 1711 aa25.7■■□□□ 1.7
NDE1-205ENST00000572756 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
NDE1-205ENST00000572756 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
NDE1-205ENST00000572756 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
NDE1-205ENST00000572756 HECW2Q9P2P5 1572 aa25.66■■□□□ 1.7
NDE1-205ENST00000572756 MAP3K1Q13233 1512 aa25.65■■□□□ 1.7
NDE1-205ENST00000572756 SUPT6HQ7KZ85 1726 aaKnown RBP25.65■■□□□ 1.7
NDE1-205ENST00000572756 MLH3Q9UHC1 1453 aa25.64■■□□□ 1.69
NDE1-205ENST00000572756 ATP10AO60312 1499 aa25.63■■□□□ 1.69
NDE1-205ENST00000572756 SYCP2Q9BX26 1530 aa25.63■■□□□ 1.69
NDE1-205ENST00000572756 LRRC9Q6ZRR7 1453 aa25.62■■□□□ 1.69
NDE1-205ENST00000572756 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
NDE1-205ENST00000572756 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
NDE1-205ENST00000572756 KIAA1107Q9UPP5 1409 aa25.61■■□□□ 1.69
NDE1-205ENST00000572756 ARID4BQ4LE39 1312 aaPredicted RBP25.61■■□□□ 1.69
NDE1-205ENST00000572756 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
NDE1-205ENST00000572756 ZNF777Q9ULD5 760 aaPredicted RBP25.6■■□□□ 1.69
NDE1-205ENST00000572756 C9orf84Q5VXU9 1444 aa25.6■■□□□ 1.69
NDE1-205ENST00000572756 PLEKHH2Q8IVE3 1493 aa25.6■■□□□ 1.69
NDE1-205ENST00000572756 MADDQ8WXG6 1647 aa25.59■■□□□ 1.69
NDE1-205ENST00000572756 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
NDE1-205ENST00000572756 KIDINS220Q9ULH0 1771 aa25.59■■□□□ 1.69
NDE1-205ENST00000572756 REREQ9P2R6 1566 aa25.56■■□□□ 1.68
NDE1-205ENST00000572756 PTPRMP28827 1452 aa25.54■■□□□ 1.68
NDE1-205ENST00000572756 HNRNPMP52272 730 aaKnown RBP eCLIP25.54■■□□□ 1.68
NDE1-205ENST00000572756 KANK4Q5T7N3 995 aaPredicted RBP25.53■■□□□ 1.68
NDE1-205ENST00000572756 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
NDE1-205ENST00000572756 MBD5Q9P267 1494 aa25.51■■□□□ 1.67
NDE1-205ENST00000572756 RIMS1Q86UR5 1692 aaKnown RBP25.51■■□□□ 1.67
NDE1-205ENST00000572756 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
NDE1-205ENST00000572756 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
NDE1-205ENST00000572756 FER1L4A9Z1Z3 1794 aa25.47■■□□□ 1.67
NDE1-205ENST00000572756 AGLP35573 1532 aa25.47■■□□□ 1.67
NDE1-205ENST00000572756 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
NDE1-205ENST00000572756 SPAG9O60271 1321 aaKnown RBP25.46■■□□□ 1.67
NDE1-205ENST00000572756 CAMSAP2Q08AD1 1489 aa25.46■■□□□ 1.67
NDE1-205ENST00000572756 MLECQ14165 292 aa25.42■■□□□ 1.66
NDE1-205ENST00000572756 MYOM3Q5VTT5 1437 aa25.38■■□□□ 1.65
NDE1-205ENST00000572756 APLP2Q06481 763 aa25.38■■□□□ 1.65
NDE1-205ENST00000572756 CCDC141Q6ZP82 1450 aa25.38■■□□□ 1.65
NDE1-205ENST00000572756 PLXNC1O60486 1568 aa25.38■■□□□ 1.65
NDE1-205ENST00000572756 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
NDE1-205ENST00000572756 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
NDE1-205ENST00000572756 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
NDE1-205ENST00000572756 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
NDE1-205ENST00000572756 A2MP01023 1474 aa25.34■■□□□ 1.65
NDE1-205ENST00000572756 RSPH4AQ5TD94 716 aa25.33■■□□□ 1.65
NDE1-205ENST00000572756 LMTK3Q96Q04 1460 aa25.26■■□□□ 1.63
NDE1-205ENST00000572756 MAST1Q9Y2H9 1570 aa25.26■■□□□ 1.63
NDE1-205ENST00000572756 PTPN23Q9H3S7 1636 aa25.25■■□□□ 1.63
NDE1-205ENST00000572756 C3P01024 1663 aa25.23■■□□□ 1.63
NDE1-205ENST00000572756 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
NDE1-205ENST00000572756 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
NDE1-205ENST00000572756 CNTLNQ9NXG0 1405 aa25.21■■□□□ 1.63
NDE1-205ENST00000572756 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
NDE1-205ENST00000572756 PLPPR3Q6T4P5 718 aa25.21■■□□□ 1.63
NDE1-205ENST00000572756 TCOF1Q13428 1488 aaKnown RBP25.21■■□□□ 1.63
NDE1-205ENST00000572756 TSPY4P0CV99 314 aa25.2■■□□□ 1.62
NDE1-205ENST00000572756 TSPY10P0CW01 314 aa25.2■■□□□ 1.62
NDE1-205ENST00000572756 CEBPAP49715 358 aaPredicted RBP25.2■■□□□ 1.62
NDE1-205ENST00000572756 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
NDE1-205ENST00000572756 CROCC2H7BZ55 1655 aa25.18■■□□□ 1.62
NDE1-205ENST00000572756 PREX1Q8TCU6 1659 aa25.17■■□□□ 1.62
NDE1-205ENST00000572756 ESF1Q9H501 851 aaKnown RBP25.16■■□□□ 1.62
NDE1-205ENST00000572756 CLTCQ00610 1675 aaKnown RBP25.16■■□□□ 1.62
NDE1-205ENST00000572756 ABCC5O15440 1437 aa25.14■■□□□ 1.62
NDE1-205ENST00000572756 DNMT1P26358 1616 aaKnown RBP25.14■■□□□ 1.61
NDE1-205ENST00000572756 SHANK2Q9UPX8 1470 aa25.14■■□□□ 1.61
NDE1-205ENST00000572756 GGT6Q6P531 493 aa25.12■■□□□ 1.61
NDE1-205ENST00000572756 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
NDE1-205ENST00000572756 DAPK1P53355 1430 aa25.11■■□□□ 1.61
NDE1-205ENST00000572756 ZMYM3Q14202 1370 aa25.1■■□□□ 1.61
NDE1-205ENST00000572756 KIF3BO15066 747 aa25.09■■□□□ 1.61
NDE1-205ENST00000572756 EIF2AK4Q9P2K8 1649 aaKnown RBP25.08■■□□□ 1.6
NDE1-205ENST00000572756 FAM135AQ9P2D6 1515 aa25.07■■□□□ 1.6
NDE1-205ENST00000572756 RNF17Q9BXT8 1623 aaKnown RBP25.07■■□□□ 1.6
NDE1-205ENST00000572756 NPATQ14207 1427 aa25.06■■□□□ 1.6
NDE1-205ENST00000572756 HSPA2P54652 639 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms