RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
SPOP-221ENST00000572686 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
SPOP-221ENST00000572686 FANCAO15360 1455 aa12.05□□□□□ -0.48
SPOP-221ENST00000572686 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
SPOP-221ENST00000572686 PTPRMP28827 1452 aa12.04□□□□□ -0.48
SPOP-221ENST00000572686 UBTFP17480 764 aaKnown RBP12.04□□□□□ -0.48
SPOP-221ENST00000572686 ARHGEF40Q8TER5 1519 aa12.03□□□□□ -0.48
SPOP-221ENST00000572686 ARHGAP35Q9NRY4 1499 aa12.03□□□□□ -0.48
SPOP-221ENST00000572686 MADDQ8WXG6 1647 aa12.02□□□□□ -0.48
SPOP-221ENST00000572686 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
SPOP-221ENST00000572686 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
SPOP-221ENST00000572686 SLC24A1O60721 1099 aa12.01□□□□□ -0.49
SPOP-221ENST00000572686 HECW1Q76N89 1606 aa12□□□□□ -0.49
SPOP-221ENST00000572686 FMN1Q68DA7 1419 aa12□□□□□ -0.49
SPOP-221ENST00000572686 SIGLEC1Q9BZZ2 1709 aa12□□□□□ -0.49
SPOP-221ENST00000572686 PLCH2O75038 1416 aa11.99□□□□□ -0.49
SPOP-221ENST00000572686 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
SPOP-221ENST00000572686 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
SPOP-221ENST00000572686 RIMS1Q86UR5 1692 aaKnown RBP11.98□□□□□ -0.49
SPOP-221ENST00000572686 LRRIQ1Q96JM4 1722 aa11.98□□□□□ -0.49
SPOP-221ENST00000572686 YEATS2Q9ULM3 1422 aa11.98□□□□□ -0.49
SPOP-221ENST00000572686 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
SPOP-221ENST00000572686 MYO5CQ9NQX4 1742 aa11.97□□□□□ -0.49
SPOP-221ENST00000572686 KIF14Q15058 1648 aa11.97□□□□□ -0.49
SPOP-221ENST00000572686 SCAPERQ9BY12 1400 aa11.97□□□□□ -0.49
SPOP-221ENST00000572686 MAGI2Q86UL8 1455 aa11.97□□□□□ -0.49
SPOP-221ENST00000572686 POGZQ7Z3K3 1410 aa11.96□□□□□ -0.5
SPOP-221ENST00000572686 CDK11AQ9UQ88 783 aaPredicted RBP11.95□□□□□ -0.5
SPOP-221ENST00000572686 PCF11O94913 1555 aaKnown RBP11.94□□□□□ -0.5
SPOP-221ENST00000572686 EFCAB2Q5VUJ9 269 aa11.94□□□□□ -0.5
SPOP-221ENST00000572686 TROQ12816 1431 aaPredicted RBP11.94□□□□□ -0.5
SPOP-221ENST00000572686 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
SPOP-221ENST00000572686 C1QBPQ07021 282 aaKnown RBP11.93□□□□□ -0.5
SPOP-221ENST00000572686 FER1L4A9Z1Z3 1794 aa11.91□□□□□ -0.5
SPOP-221ENST00000572686 ATP10AO60312 1499 aa11.91□□□□□ -0.5
SPOP-221ENST00000572686 CDC42BPBQ9Y5S2 1711 aa11.91□□□□□ -0.5
SPOP-221ENST00000572686 CLIP1P30622 1438 aa11.9□□□□□ -0.5
SPOP-221ENST00000572686 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
SPOP-221ENST00000572686 MLECQ14165 292 aa11.9□□□□□ -0.5
SPOP-221ENST00000572686 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
SPOP-221ENST00000572686 CASKIN1Q8WXD9 1431 aa11.89□□□□□ -0.51
SPOP-221ENST00000572686 KDM5CP41229 1560 aa11.89□□□□□ -0.51
SPOP-221ENST00000572686 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
SPOP-221ENST00000572686 ZNF518AQ6AHZ1 1483 aa11.88□□□□□ -0.51
SPOP-221ENST00000572686 AFAP1Q8N556 730 aa11.88□□□□□ -0.51
SPOP-221ENST00000572686 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
SPOP-221ENST00000572686 CCDC18Q5T9S5 1454 aa11.87□□□□□ -0.51
SPOP-221ENST00000572686 HSPA2P54652 639 aa11.86□□□□□ -0.51
SPOP-221ENST00000572686 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
SPOP-221ENST00000572686 DIP2CQ9Y2E4 1556 aa11.85□□□□□ -0.51
SPOP-221ENST00000572686 CDC42BPAQ5VT25 1732 aa11.85□□□□□ -0.51
SPOP-221ENST00000572686 ABCC1P33527 1531 aa11.84□□□□□ -0.51
SPOP-221ENST00000572686 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
SPOP-221ENST00000572686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.84□□□□□ -0.51
SPOP-221ENST00000572686 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
SPOP-221ENST00000572686 ABCA6Q8N139 1617 aa11.84□□□□□ -0.51
SPOP-221ENST00000572686 KCNA4P22459 653 aa11.83□□□□□ -0.52
SPOP-221ENST00000572686 REREQ9P2R6 1566 aa11.83□□□□□ -0.52
SPOP-221ENST00000572686 TRAPPC8Q9Y2L5 1435 aa11.83□□□□□ -0.52
SPOP-221ENST00000572686 MLH3Q9UHC1 1453 aa11.83□□□□□ -0.52
SPOP-221ENST00000572686 PREX1Q8TCU6 1659 aa11.82□□□□□ -0.52
SPOP-221ENST00000572686 CEBPAP49715 358 aaPredicted RBP11.81□□□□□ -0.52
SPOP-221ENST00000572686 MYT1LQ9UL68 1186 aa11.81□□□□□ -0.52
SPOP-221ENST00000572686 KIDINS220Q9ULH0 1771 aa11.81□□□□□ -0.52
SPOP-221ENST00000572686 SETD1BQ9UPS6 1966 aaKnown RBP11.79□□□□□ -0.52
SPOP-221ENST00000572686 AGLP35573 1532 aa11.79□□□□□ -0.52
SPOP-221ENST00000572686 SAMD9LQ8IVG5 1584 aa11.78□□□□□ -0.52
SPOP-221ENST00000572686 C3P01024 1663 aa11.78□□□□□ -0.52
SPOP-221ENST00000572686 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
SPOP-221ENST00000572686 STRCQ7RTU9 1775 aa11.76□□□□□ -0.53
SPOP-221ENST00000572686 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
SPOP-221ENST00000572686 ZNF777Q9ULD5 760 aaPredicted RBP11.75□□□□□ -0.53
SPOP-221ENST00000572686 SYCP2Q9BX26 1530 aa11.75□□□□□ -0.53
SPOP-221ENST00000572686 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPOP-221ENST00000572686 UHRF1BP1Q6BDS2 1440 aa11.74□□□□□ -0.53
SPOP-221ENST00000572686 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
SPOP-221ENST00000572686 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
SPOP-221ENST00000572686 SPAG9O60271 1321 aaKnown RBP11.72□□□□□ -0.53
SPOP-221ENST00000572686 KIAA1107Q9UPP5 1409 aa11.72□□□□□ -0.53
SPOP-221ENST00000572686 ESF1Q9H501 851 aaKnown RBP11.71□□□□□ -0.53
SPOP-221ENST00000572686 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.53
SPOP-221ENST00000572686 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
SPOP-221ENST00000572686 INO80Q9ULG1 1556 aaPredicted RBP11.71□□□□□ -0.53
SPOP-221ENST00000572686 ATP7AQ04656 1500 aa11.71□□□□□ -0.54
SPOP-221ENST00000572686 MTUS2Q5JR59 1369 aa11.71□□□□□ -0.54
SPOP-221ENST00000572686 PLEKHH2Q8IVE3 1493 aa11.71□□□□□ -0.54
SPOP-221ENST00000572686 MROH2AA6NES4 1674 aa11.71□□□□□ -0.54
SPOP-221ENST00000572686 CNTLNQ9NXG0 1405 aa11.7□□□□□ -0.54
SPOP-221ENST00000572686 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
SPOP-221ENST00000572686 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
SPOP-221ENST00000572686 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
SPOP-221ENST00000572686 A2MP01023 1474 aa11.67□□□□□ -0.54
SPOP-221ENST00000572686 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
SPOP-221ENST00000572686 CLTCQ00610 1675 aaKnown RBP11.67□□□□□ -0.54
SPOP-221ENST00000572686 ZMYM3Q14202 1370 aa11.67□□□□□ -0.54
SPOP-221ENST00000572686 PTPRTO14522 1441 aa11.67□□□□□ -0.54
SPOP-221ENST00000572686 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
SPOP-221ENST00000572686 NPATQ14207 1427 aa11.66□□□□□ -0.54
SPOP-221ENST00000572686 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
SPOP-221ENST00000572686 MBD5Q9P267 1494 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms