RNA–Protein interactions for RNA: ENST00000572221.5

EDC4-204, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-204ENST00000572221 KANK4Q5T7N3 995 aaPredicted RBP26.47■■□□□ 1.83
EDC4-204ENST00000572221 FGD1P98174 961 aa26.46■■□□□ 1.83
EDC4-204ENST00000572221 NUP155O75694 1391 aa26.45■■□□□ 1.82
EDC4-204ENST00000572221 KCNJ4P48050 445 aa26.45■■□□□ 1.82
EDC4-204ENST00000572221 MPHOSPH9Q99550 1183 aa26.45■■□□□ 1.82
EDC4-204ENST00000572221 RTF1Q92541 710 aaKnown RBP26.44■■□□□ 1.82
EDC4-204ENST00000572221 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
EDC4-204ENST00000572221 HSP90AB1P08238 724 aaKnown RBP26.43■■□□□ 1.82
EDC4-204ENST00000572221 CALD1Q05682 793 aaKnown RBP26.42■■□□□ 1.82
EDC4-204ENST00000572221 SAFB2Q14151 953 aaKnown RBP eCLIP26.42■■□□□ 1.82
EDC4-204ENST00000572221 RALBP1Q15311 655 aa26.41■■□□□ 1.82
EDC4-204ENST00000572221 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
EDC4-204ENST00000572221 IPO8O15397 1037 aaKnown RBP26.41■■□□□ 1.82
EDC4-204ENST00000572221 ROCK2O75116 1388 aaKnown RBP26.39■■□□□ 1.82
EDC4-204ENST00000572221 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.81
EDC4-204ENST00000572221 GOLGA2Q08379 1002 aa26.38■■□□□ 1.81
EDC4-204ENST00000572221 B4GALNT3Q6L9W6 998 aa26.38■■□□□ 1.81
EDC4-204ENST00000572221 STK26Q9P289 416 aa26.38■■□□□ 1.81
EDC4-204ENST00000572221 EIF3AQ14152 1382 aaKnown RBP26.37■■□□□ 1.81
EDC4-204ENST00000572221 SOX12O15370 315 aa26.37■■□□□ 1.81
EDC4-204ENST00000572221 ERICH6BQ5W0A0 696 aa26.37■■□□□ 1.81
EDC4-204ENST00000572221 CHMP4AQ9BY43 222 aa26.37■■□□□ 1.81
EDC4-204ENST00000572221 NOP58Q9Y2X3 529 aaKnown RBP26.36■■□□□ 1.81
EDC4-204ENST00000572221 MCCP23508 829 aa26.35■■□□□ 1.81
EDC4-204ENST00000572221 CADPSQ9ULU8 1353 aa26.35■■□□□ 1.81
EDC4-204ENST00000572221 HSCBQ8IWL3 235 aa26.34■■□□□ 1.81
EDC4-204ENST00000572221 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
EDC4-204ENST00000572221 FOXD1Q16676 465 aa26.32■■□□□ 1.8
EDC4-204ENST00000572221 RAPGEF2Q9Y4G8 1499 aa26.32■■□□□ 1.8
EDC4-204ENST00000572221 DNTTIP2Q5QJE6 756 aaKnown RBP26.3■■□□□ 1.8
EDC4-204ENST00000572221 GOLGA6L6A8MZA4 724 aa26.29■■□□□ 1.8
EDC4-204ENST00000572221 U2AF1L5P0DN76 240 aaPredicted RBP26.29■■□□□ 1.8
EDC4-204ENST00000572221 U2AF1Q01081 240 aaKnown RBP eCLIP26.29■■□□□ 1.82e-11■□□□□ 8.6
EDC4-204ENST00000572221 KIF3BO15066 747 aa26.28■■□□□ 1.8
EDC4-204ENST00000572221 CCDC18Q5T9S5 1454 aa26.28■■□□□ 1.8
EDC4-204ENST00000572221 NRDCO43847 1150 aa26.27■■□□□ 1.8
EDC4-204ENST00000572221 TPRNQ4KMQ1 711 aa26.26■■□□□ 1.79
EDC4-204ENST00000572221 GOLGA6L4A6NEF3 574 aa26.26■■□□□ 1.79
EDC4-204ENST00000572221 SPAG9O60271 1321 aaKnown RBP26.24■■□□□ 1.79
EDC4-204ENST00000572221 NAP1L2Q9ULW6 460 aaPredicted RBP26.24■■□□□ 1.79
EDC4-204ENST00000572221 TERF2IPQ9NYB0 399 aa26.24■■□□□ 1.79
EDC4-204ENST00000572221 RCAN3Q9UKA8 241 aa26.22■■□□□ 1.79
EDC4-204ENST00000572221 PLCB2Q00722 1185 aa26.2■■□□□ 1.78
EDC4-204ENST00000572221 RWDD1Q9H446 243 aaPredicted RBP26.2■■□□□ 1.78
EDC4-204ENST00000572221 PAK3O75914 559 aaPredicted RBP26.19■■□□□ 1.78
EDC4-204ENST00000572221 FHOD3Q2V2M9 1422 aa26.18■■□□□ 1.78
EDC4-204ENST00000572221 HNRNPMP52272 730 aaKnown RBP eCLIP26.18■■□□□ 1.78
EDC4-204ENST00000572221 JPH4Q96JJ6 628 aa26.17■■□□□ 1.78
EDC4-204ENST00000572221 L3MBTL2Q969R5 705 aa26.16■■□□□ 1.78
EDC4-204ENST00000572221 HDAC5Q9UQL6 1122 aa26.16■■□□□ 1.78
EDC4-204ENST00000572221 EID1Q9Y6B2 187 aa26.16■■□□□ 1.78
EDC4-204ENST00000572221 CSB-PGBD3P0DP91 1061 aa26.15■■□□□ 1.78
EDC4-204ENST00000572221 KIAA1211Q6ZU35 1233 aa26.15■■□□□ 1.78
EDC4-204ENST00000572221 WASHC2CQ9Y4E1 1318 aa26.14■■□□□ 1.78
EDC4-204ENST00000572221 NLRP13Q86W25 1043 aa26.13■■□□□ 1.77
EDC4-204ENST00000572221 TAOK2Q9UL54 1235 aa26.13■■□□□ 1.77
EDC4-204ENST00000572221 STK31Q9BXU1 1019 aa26.13■■□□□ 1.77
EDC4-204ENST00000572221 PDE3BQ13370 1112 aa26.1■■□□□ 1.77
EDC4-204ENST00000572221 ITPRIPQ8IWB1 547 aa26.1■■□□□ 1.77
EDC4-204ENST00000572221 LMOD3Q0VAK6 560 aa26.09■■□□□ 1.77
EDC4-204ENST00000572221 PMFBP1Q8TBY8 1022 aa26.09■■□□□ 1.77
EDC4-204ENST00000572221 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
EDC4-204ENST00000572221 TCERG1O14776 1098 aaKnown RBP26.08■■□□□ 1.77
EDC4-204ENST00000572221 TULP1O00294 542 aaPredicted RBP26.07■■□□□ 1.76
EDC4-204ENST00000572221 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
EDC4-204ENST00000572221 L1TD1Q5T7N2 865 aaKnown RBP26.07■■□□□ 1.76
EDC4-204ENST00000572221 WIZO95785 1651 aa26.07■■□□□ 1.76
EDC4-204ENST00000572221 PTMSP20962 102 aa26.05■■□□□ 1.76
EDC4-204ENST00000572221 HMMRO75330 724 aa26.04■■□□□ 1.76
EDC4-204ENST00000572221 APBB1O00213 710 aa26.03■■□□□ 1.76
EDC4-204ENST00000572221 NGDNQ8NEJ9 315 aaKnown RBP26.02■■□□□ 1.76
EDC4-204ENST00000572221 SMC4Q9NTJ3 1288 aa26.01■■□□□ 1.76
EDC4-204ENST00000572221 UACAQ9BZF9 1416 aa26.01■■□□□ 1.75
EDC4-204ENST00000572221 NAP1L5Q96NT1 182 aaPredicted RBP25.99■■□□□ 1.75
EDC4-204ENST00000572221 GBP4Q96PP9 640 aa25.99■■□□□ 1.75
EDC4-204ENST00000572221 CCDC144AA2RUR9 1427 aa25.99■■□□□ 1.75
EDC4-204ENST00000572221 GNL2Q13823 731 aaKnown RBP25.98■■□□□ 1.75
EDC4-204ENST00000572221 CHAF1AQ13111 956 aaPredicted RBP25.97■■□□□ 1.75
EDC4-204ENST00000572221 GPATCH3Q96I76 525 aa25.97■■□□□ 1.75
EDC4-204ENST00000572221 KIF15Q9NS87 1388 aa25.97■■□□□ 1.75
EDC4-204ENST00000572221 HTATSF1O43719 755 aaKnown RBP25.96■■□□□ 1.75
EDC4-204ENST00000572221 RBM19Q9Y4C8 960 aaKnown RBP25.95■■□□□ 1.74
EDC4-204ENST00000572221 CENPJQ9HC77 1338 aaPredicted RBP25.95■■□□□ 1.74
EDC4-204ENST00000572221 AMPHP49418 695 aa25.95■■□□□ 1.74
EDC4-204ENST00000572221 ZNF330Q9Y3S2 320 aaPredicted RBP25.94■■□□□ 1.74
EDC4-204ENST00000572221 PTPRGP23470 1445 aa25.94■■□□□ 1.74
EDC4-204ENST00000572221 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
EDC4-204ENST00000572221 VGFO15240 615 aaPredicted RBP25.92■■□□□ 1.74
EDC4-204ENST00000572221 GORABQ5T7V8 394 aa25.91■■□□□ 1.74
EDC4-204ENST00000572221 MSNP26038 577 aaKnown RBP25.91■■□□□ 1.74
EDC4-204ENST00000572221 ISY1Q9ULR0 285 aaKnown RBP25.91■■□□□ 1.74
EDC4-204ENST00000572221 TRAK1Q9UPV9 953 aa25.91■■□□□ 1.74
EDC4-204ENST00000572221 SPRYD3Q8NCJ5 442 aa25.9■■□□□ 1.74
EDC4-204ENST00000572221 MYBBP1AQ9BQG0 1328 aaKnown RBP25.9■■□□□ 1.74
EDC4-204ENST00000572221 TMX4Q9H1E5 349 aaPredicted RBP25.89■■□□□ 1.73
EDC4-204ENST00000572221 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
EDC4-204ENST00000572221 ST20-MTHFSA0A0A6YYL1 179 aa25.87■■□□□ 1.73
EDC4-204ENST00000572221 TAF7LQ5H9L4 462 aa25.87■■□□□ 1.73
EDC4-204ENST00000572221 NUTM2DQ5VT03 806 aaPredicted RBP25.86■■□□□ 1.73
EDC4-204ENST00000572221 DRC7Q8IY82 874 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms