RNA–Protein interactions for RNA: ENST00000571178.1

PAM16-202, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-202ENST00000571178 PTPRMP28827 1452 aa23.57■■□□□ 1.36
PAM16-202ENST00000571178 ADAMTSL3P82987 1691 aa23.55■■□□□ 1.36
PAM16-202ENST00000571178 POGZQ7Z3K3 1410 aa23.55■■□□□ 1.36
PAM16-202ENST00000571178 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
PAM16-202ENST00000571178 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
PAM16-202ENST00000571178 SIGLEC1Q9BZZ2 1709 aa23.52■■□□□ 1.36
PAM16-202ENST00000571178 ARHGAP5Q13017 1502 aa23.52■■□□□ 1.36
PAM16-202ENST00000571178 CFAP74Q9C0B2 1584 aa23.52■■□□□ 1.36
PAM16-202ENST00000571178 ZFYVE16Q7Z3T8 1539 aa23.51■■□□□ 1.35
PAM16-202ENST00000571178 ARHGEF40Q8TER5 1519 aa23.51■■□□□ 1.35
PAM16-202ENST00000571178 BCORL1Q5H9F3 1711 aa23.49■■□□□ 1.35
PAM16-202ENST00000571178 ZMYM4Q5VZL5 1548 aa23.49■■□□□ 1.35
PAM16-202ENST00000571178 ARHGEF12Q9NZN5 1544 aa23.49■■□□□ 1.35
PAM16-202ENST00000571178 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
PAM16-202ENST00000571178 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
PAM16-202ENST00000571178 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.353e-7■■■■■ 27.4
PAM16-202ENST00000571178 CCDC18Q5T9S5 1454 aa23.46■■□□□ 1.35
PAM16-202ENST00000571178 ILDR1Q86SU0 546 aaPredicted RBP23.46■■□□□ 1.35
PAM16-202ENST00000571178 MAGI2Q86UL8 1455 aa23.46■■□□□ 1.35
PAM16-202ENST00000571178 FYCO1Q9BQS8 1478 aa23.46■■□□□ 1.35
PAM16-202ENST00000571178 MYO5CQ9NQX4 1742 aa23.46■■□□□ 1.35
PAM16-202ENST00000571178 ATP10AO60312 1499 aa23.45■■□□□ 1.34
PAM16-202ENST00000571178 CEBPAP49715 358 aaPredicted RBP23.45■■□□□ 1.34
PAM16-202ENST00000571178 HSPA2P54652 639 aa23.43■■□□□ 1.34
PAM16-202ENST00000571178 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
PAM16-202ENST00000571178 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
PAM16-202ENST00000571178 GPATCH8Q9UKJ3 1502 aaKnown RBP23.38■■□□□ 1.33
PAM16-202ENST00000571178 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
PAM16-202ENST00000571178 ZNF644Q9H582 1327 aaPredicted RBP23.38■■□□□ 1.33
PAM16-202ENST00000571178 ZNF518AQ6AHZ1 1483 aa23.38■■□□□ 1.33
PAM16-202ENST00000571178 C9orf84Q5VXU9 1444 aa23.36■■□□□ 1.33
PAM16-202ENST00000571178 CFDP1Q9UEE9 299 aaPredicted RBP23.36■■□□□ 1.33
PAM16-202ENST00000571178 MTUS2Q5JR59 1369 aa23.34■■□□□ 1.33
PAM16-202ENST00000571178 PREX2Q70Z35 1606 aa23.32■■□□□ 1.32
PAM16-202ENST00000571178 KDM5CP41229 1560 aa23.31■■□□□ 1.32
PAM16-202ENST00000571178 CCNB3Q8WWL7 1395 aa23.31■■□□□ 1.32
PAM16-202ENST00000571178 ABCC1P33527 1531 aa23.31■■□□□ 1.32
PAM16-202ENST00000571178 LMTK3Q96Q04 1460 aa23.3■■□□□ 1.32
PAM16-202ENST00000571178 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
PAM16-202ENST00000571178 CDC42BPAQ5VT25 1732 aa23.3■■□□□ 1.32
PAM16-202ENST00000571178 SPAG9O60271 1321 aaKnown RBP23.29■■□□□ 1.32
PAM16-202ENST00000571178 DIP2CQ9Y2E4 1556 aa23.28■■□□□ 1.32
PAM16-202ENST00000571178 SAMD9LQ8IVG5 1584 aa23.27■■□□□ 1.32
PAM16-202ENST00000571178 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
PAM16-202ENST00000571178 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
PAM16-202ENST00000571178 ITSN2Q9NZM3 1697 aa23.23■■□□□ 1.31
PAM16-202ENST00000571178 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
PAM16-202ENST00000571178 KIDINS220Q9ULH0 1771 aa23.2■■□□□ 1.3
PAM16-202ENST00000571178 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
PAM16-202ENST00000571178 KIAA1107Q9UPP5 1409 aa23.18■■□□□ 1.3
PAM16-202ENST00000571178 ESF1Q9H501 851 aaKnown RBP23.17■■□□□ 1.3
PAM16-202ENST00000571178 TIAM1Q13009 1591 aa23.15■■□□□ 1.3
PAM16-202ENST00000571178 GGT6Q6P531 493 aa23.15■■□□□ 1.3
PAM16-202ENST00000571178 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
PAM16-202ENST00000571178 AGLP35573 1532 aa23.13■■□□□ 1.29
PAM16-202ENST00000571178 NCOA2Q15596 1464 aa23.12■■□□□ 1.29
PAM16-202ENST00000571178 REREQ9P2R6 1566 aa23.12■■□□□ 1.29
PAM16-202ENST00000571178 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
PAM16-202ENST00000571178 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
PAM16-202ENST00000571178 PLEKHH2Q8IVE3 1493 aa23.1■■□□□ 1.29
PAM16-202ENST00000571178 ATP7AQ04656 1500 aa23.08■■□□□ 1.28
PAM16-202ENST00000571178 A2MP01023 1474 aa23.07■■□□□ 1.28
PAM16-202ENST00000571178 ZMYM3Q14202 1370 aa23.06■■□□□ 1.28
PAM16-202ENST00000571178 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
PAM16-202ENST00000571178 FBXO41Q8TF61 875 aa23.04■■□□□ 1.28
PAM16-202ENST00000571178 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
PAM16-202ENST00000571178 UHRF1BP1Q6BDS2 1440 aa23.01■■□□□ 1.27
PAM16-202ENST00000571178 C3P01024 1663 aa23.01■■□□□ 1.27
PAM16-202ENST00000571178 KIF3BO15066 747 aa23.01■■□□□ 1.27
PAM16-202ENST00000571178 INO80Q9ULG1 1556 aaPredicted RBP23.01■■□□□ 1.27
PAM16-202ENST00000571178 CAMSAP2Q08AD1 1489 aa23■■□□□ 1.27
PAM16-202ENST00000571178 DHX29Q7Z478 1369 aaKnown RBP23■■□□□ 1.27
PAM16-202ENST00000571178 CERKQ8TCT0 537 aa22.97■■□□□ 1.27
PAM16-202ENST00000571178 CNTLNQ9NXG0 1405 aa22.97■■□□□ 1.27
PAM16-202ENST00000571178 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
PAM16-202ENST00000571178 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
PAM16-202ENST00000571178 FBXO31Q5XUX0 539 aaPredicted RBP22.96■■□□□ 1.27
PAM16-202ENST00000571178 RTEL1-TNFRSF6BF6WH68 1400 aa22.96■■□□□ 1.27
PAM16-202ENST00000571178 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
PAM16-202ENST00000571178 PREX1Q8TCU6 1659 aa22.95■■□□□ 1.26
PAM16-202ENST00000571178 NCKAP5LQ9HCH0 1330 aa22.94■■□□□ 1.26
PAM16-202ENST00000571178 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
PAM16-202ENST00000571178 CCDC141Q6ZP82 1450 aa22.93■■□□□ 1.26
PAM16-202ENST00000571178 STRCQ7RTU9 1775 aa22.91■■□□□ 1.26
PAM16-202ENST00000571178 CLTCQ00610 1675 aaKnown RBP22.9■■□□□ 1.26
PAM16-202ENST00000571178 PTPRKQ15262 1439 aa22.9■■□□□ 1.26
PAM16-202ENST00000571178 SETD1BQ9UPS6 1966 aaKnown RBP22.89■■□□□ 1.26
PAM16-202ENST00000571178 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.25
PAM16-202ENST00000571178 APLP2Q06481 763 aa22.88■■□□□ 1.25
PAM16-202ENST00000571178 PPP6R1Q9UPN7 881 aa22.87■■□□□ 1.25
PAM16-202ENST00000571178 WASHC2CQ9Y4E1 1318 aa22.86■■□□□ 1.25
PAM16-202ENST00000571178 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
PAM16-202ENST00000571178 NPATQ14207 1427 aa22.85■■□□□ 1.25
PAM16-202ENST00000571178 ADGBQ8N7X0 1667 aa22.84■■□□□ 1.25
PAM16-202ENST00000571178 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
PAM16-202ENST00000571178 NCOA1Q15788 1441 aa22.82■■□□□ 1.24
PAM16-202ENST00000571178 RRP7BPQ9NSQ0 103 aa22.82■■□□□ 1.24
PAM16-202ENST00000571178 CHIC2Q9UKJ5 165 aa22.81■■□□□ 1.24
PAM16-202ENST00000571178 ARHGEF5Q12774 1597 aa22.8■■□□□ 1.24
PAM16-202ENST00000571178 MROH2AA6NES4 1674 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms