RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 FAM43BQ6ZT52 329 aaPredicted RBP11.78□□□□□ -0.52
TRIM25-203ENST00000570473 TTC36A6NLP5 189 aa11.77□□□□□ -0.53
TRIM25-203ENST00000570473 APPP05067 770 aa11.77□□□□□ -0.53
TRIM25-203ENST00000570473 TNNT2P45379 298 aaPredicted RBP11.77□□□□□ -0.53
TRIM25-203ENST00000570473 NBPF11Q86T75 865 aa11.77□□□□□ -0.53
TRIM25-203ENST00000570473 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
TRIM25-203ENST00000570473 TPM2P07951 284 aa11.76□□□□□ -0.53
TRIM25-203ENST00000570473 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
TRIM25-203ENST00000570473 YY1AP1Q9H869 796 aa11.76□□□□□ -0.53
TRIM25-203ENST00000570473 TMEM51Q9NW97 253 aa11.76□□□□□ -0.53
TRIM25-203ENST00000570473 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
TRIM25-203ENST00000570473 NBPF1Q3BBV0 1214 aa11.75□□□□□ -0.53
TRIM25-203ENST00000570473 GOLGA6L3A6NEY3 463 aa11.74□□□□□ -0.53
TRIM25-203ENST00000570473 KIF20AO95235 890 aa11.74□□□□□ -0.53
TRIM25-203ENST00000570473 RGS3P49796 1198 aa11.74□□□□□ -0.53
TRIM25-203ENST00000570473 MTERF4Q7Z6M4 381 aaKnown RBP11.74□□□□□ -0.53
TRIM25-203ENST00000570473 CC2D1BQ5T0F9 858 aaKnown RBP11.73□□□□□ -0.53
TRIM25-203ENST00000570473 CASC1Q6TDU7 716 aa11.73□□□□□ -0.53
TRIM25-203ENST00000570473 ZNF692Q9BU19 519 aaPredicted RBP11.73□□□□□ -0.53
TRIM25-203ENST00000570473 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
TRIM25-203ENST00000570473 ZNF830Q96NB3 372 aaPredicted RBP11.72□□□□□ -0.53
TRIM25-203ENST00000570473 PSEN1P49768 467 aa11.71□□□□□ -0.53
TRIM25-203ENST00000570473 PLEKHD1A6NEE1 506 aa11.7□□□□□ -0.54
TRIM25-203ENST00000570473 TCERG1O14776 1098 aaKnown RBP11.69□□□□□ -0.54
TRIM25-203ENST00000570473 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
TRIM25-203ENST00000570473 RALBP1Q15311 655 aa11.67□□□□□ -0.54
TRIM25-203ENST00000570473 HSP90AB3PQ58FF7 597 aa11.67□□□□□ -0.54
TRIM25-203ENST00000570473 NBR1Q14596 966 aa11.66□□□□□ -0.54
TRIM25-203ENST00000570473 CARD10Q9BWT7 1032 aa11.66□□□□□ -0.54
TRIM25-203ENST00000570473 GEMIN8Q9NWZ8 242 aaKnown RBP11.66□□□□□ -0.54
TRIM25-203ENST00000570473 EXOC8Q8IYI6 725 aa11.65□□□□□ -0.54
TRIM25-203ENST00000570473 NRDCO43847 1150 aa11.64□□□□□ -0.55
TRIM25-203ENST00000570473 FBLN2P98095 1184 aa11.64□□□□□ -0.55
TRIM25-203ENST00000570473 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
TRIM25-203ENST00000570473 FAM177A1Q8N128 213 aaPredicted RBP11.64□□□□□ -0.55
TRIM25-203ENST00000570473 GSE1Q14687 1217 aa11.63□□□□□ -0.55
TRIM25-203ENST00000570473 EGFL6Q8IUX8 553 aa11.62□□□□□ -0.55
TRIM25-203ENST00000570473 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRIM25-203ENST00000570473 PNNQ9H307 717 aaKnown RBP11.62□□□□□ -0.55
TRIM25-203ENST00000570473 CLCN1P35523 988 aa11.61□□□□□ -0.55
TRIM25-203ENST00000570473 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
TRIM25-203ENST00000570473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.555e-6■■■■■ 32.5
TRIM25-203ENST00000570473 BSDC1Q9NW68 430 aaPredicted RBP11.61□□□□□ -0.55
TRIM25-203ENST00000570473 LETM1O95202 739 aaPredicted RBP11.6□□□□□ -0.55
TRIM25-203ENST00000570473 TERF1P54274 439 aa11.6□□□□□ -0.55
TRIM25-203ENST00000570473 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
TRIM25-203ENST00000570473 MIER1Q8N108 512 aa11.6□□□□□ -0.55
TRIM25-203ENST00000570473 DMTNQ08495 405 aa11.59□□□□□ -0.55
TRIM25-203ENST00000570473 SETDB1Q15047 1291 aa11.59□□□□□ -0.55
TRIM25-203ENST00000570473 TSHZ1Q6ZSZ6 1077 aa11.58□□□□□ -0.56
TRIM25-203ENST00000570473 PLCD3Q8N3E9 789 aa11.58□□□□□ -0.56
TRIM25-203ENST00000570473 IPO9Q96P70 1041 aaKnown RBP11.58□□□□□ -0.56
TRIM25-203ENST00000570473 CALRP27797 417 aaKnown RBP11.57□□□□□ -0.56
TRIM25-203ENST00000570473 SSR1P43307 286 aaKnown RBP11.57□□□□□ -0.56
TRIM25-203ENST00000570473 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
TRIM25-203ENST00000570473 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
TRIM25-203ENST00000570473 RAI14Q9P0K7 980 aa11.57□□□□□ -0.56
TRIM25-203ENST00000570473 DNTTIP2Q5QJE6 756 aaKnown RBP11.56□□□□□ -0.56
TRIM25-203ENST00000570473 TMTC2Q8N394 836 aa11.56□□□□□ -0.56
TRIM25-203ENST00000570473 OTUD6BQ8N6M0 293 aa11.56□□□□□ -0.56
TRIM25-203ENST00000570473 TSPYL1Q9H0U9 437 aa11.56□□□□□ -0.56
TRIM25-203ENST00000570473 RBM28Q9NW13 759 aaKnown RBP11.56□□□□□ -0.56
TRIM25-203ENST00000570473 ZBTB47Q9UFB7 747 aaPredicted RBP11.56□□□□□ -0.56
TRIM25-203ENST00000570473 MKL1Q969V6 931 aa11.55□□□□□ -0.56
TRIM25-203ENST00000570473 SLC52A1Q9NWF4 448 aa11.55□□□□□ -0.56
TRIM25-203ENST00000570473 TERF2IPQ9NYB0 399 aa11.55□□□□□ -0.56
TRIM25-203ENST00000570473 SH3BP1Q9Y3L3 701 aa11.54□□□□□ -0.56
TRIM25-203ENST00000570473 RAD21O60216 631 aa11.53□□□□□ -0.56
TRIM25-203ENST00000570473 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRIM25-203ENST00000570473 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
TRIM25-203ENST00000570473 FKBP8Q14318 412 aa11.51□□□□□ -0.57
TRIM25-203ENST00000570473 KCTD17Q8N5Z5 321 aa11.51□□□□□ -0.57
TRIM25-203ENST00000570473 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
TRIM25-203ENST00000570473 GOLIM4O00461 696 aa11.5□□□□□ -0.57
TRIM25-203ENST00000570473 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
TRIM25-203ENST00000570473 NBPF10Q6P3W6 841 aaKnown RBP11.5□□□□□ -0.57
TRIM25-203ENST00000570473 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
TRIM25-203ENST00000570473 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
TRIM25-203ENST00000570473 HDAC1Q13547 482 aaPredicted RBP11.49□□□□□ -0.57
TRIM25-203ENST00000570473 ZKSCAN8Q15776 578 aaPredicted RBP11.49□□□□□ -0.57
TRIM25-203ENST00000570473 RINLQ6ZS11 566 aa11.49□□□□□ -0.57
TRIM25-203ENST00000570473 FEZ2Q9UHY8 353 aaPredicted RBP11.49□□□□□ -0.57
TRIM25-203ENST00000570473 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
TRIM25-203ENST00000570473 POTEDQ86YR6 584 aa11.48□□□□□ -0.57
TRIM25-203ENST00000570473 SATB1Q01826 763 aa11.47□□□□□ -0.57
TRIM25-203ENST00000570473 SPTY2D1Q68D10 685 aaPredicted RBP11.47□□□□□ -0.57
TRIM25-203ENST00000570473 MAP2K1Q02750 393 aaPredicted RBP11.46□□□□□ -0.57
TRIM25-203ENST00000570473 PPP4R3CPQ6ZMV5 832 aa11.46□□□□□ -0.57
TRIM25-203ENST00000570473 FAM50AQ14320 339 aaKnown RBP11.45□□□□□ -0.58
TRIM25-203ENST00000570473 HMGB1P1B2RPK0 211 aaPredicted RBP11.44□□□□□ -0.58
TRIM25-203ENST00000570473 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
TRIM25-203ENST00000570473 LOC102724159A0A0B4J2E5 919 aa11.43□□□□□ -0.58
TRIM25-203ENST00000570473 SOX12O15370 315 aa11.43□□□□□ -0.58
TRIM25-203ENST00000570473 ERCC3P19447 782 aa11.43□□□□□ -0.58
TRIM25-203ENST00000570473 PWP2Q15269 919 aaKnown RBP11.43□□□□□ -0.58
TRIM25-203ENST00000570473 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
TRIM25-203ENST00000570473 EFCC1Q9HA90 598 aa11.42□□□□□ -0.58
TRIM25-203ENST00000570473 NUB1Q9Y5A7 615 aa11.42□□□□□ -0.58
TRIM25-203ENST00000570473 KDM4AO75164 1064 aa11.41□□□□□ -0.58
TRIM25-203ENST00000570473 MYBPC2Q14324 1141 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms