RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 BCORL1Q5H9F3 1711 aa34.17■■■■□ 3.06
RPA1-202ENST00000570451 ZFYVE16Q7Z3T8 1539 aa34.16■■■■□ 3.06
RPA1-202ENST00000570451 CCDC18Q5T9S5 1454 aa34.16■■■■□ 3.06
RPA1-202ENST00000570451 POGZQ7Z3K3 1410 aa34.16■■■■□ 3.06
RPA1-202ENST00000570451 YEATS2Q9ULM3 1422 aa34.14■■■■□ 3.06
RPA1-202ENST00000570451 ARHGAP5Q13017 1502 aa34.14■■■■□ 3.06
RPA1-202ENST00000570451 PTPRMP28827 1452 aa34.14■■■■□ 3.06
RPA1-202ENST00000570451 MAGI2Q86UL8 1455 aa34.11■■■■□ 3.05
RPA1-202ENST00000570451 MADDQ8WXG6 1647 aa34.11■■■■□ 3.05
RPA1-202ENST00000570451 FYCO1Q9BQS8 1478 aa34.1■■■■□ 3.05
RPA1-202ENST00000570451 RIMS1Q86UR5 1692 aaKnown RBP34■■■■□ 3.03
RPA1-202ENST00000570451 SIGLEC1Q9BZZ2 1709 aa34■■■■□ 3.03
RPA1-202ENST00000570451 ZNF518AQ6AHZ1 1483 aa34■■■■□ 3.03
RPA1-202ENST00000570451 MLECQ14165 292 aa33.99■■■■□ 3.03
RPA1-202ENST00000570451 CDC42BPBQ9Y5S2 1711 aa33.99■■■■□ 3.03
RPA1-202ENST00000570451 AFAP1Q8N556 730 aa33.97■■■■□ 3.03
RPA1-202ENST00000570451 MYT1LQ9UL68 1186 aa33.97■■■■□ 3.03
RPA1-202ENST00000570451 PREX2Q70Z35 1606 aa33.97■■■■□ 3.03
RPA1-202ENST00000570451 ATP10AO60312 1499 aa33.95■■■■□ 3.03
RPA1-202ENST00000570451 PLPPR3Q6T4P5 718 aa33.95■■■■□ 3.03
RPA1-202ENST00000570451 C9orf84Q5VXU9 1444 aa33.92■■■■□ 3.02
RPA1-202ENST00000570451 KDM5CP41229 1560 aa33.9■■■■□ 3.02
RPA1-202ENST00000570451 CDC42BPAQ5VT25 1732 aa33.87■■■■□ 3.01
RPA1-202ENST00000570451 ABCC1P33527 1531 aa33.86■■■■□ 3.01
RPA1-202ENST00000570451 ZNF777Q9ULD5 760 aaPredicted RBP33.84■■■■□ 3.01
RPA1-202ENST00000570451 TRAPPC8Q9Y2L5 1435 aa33.84■■■■□ 3.01
RPA1-202ENST00000570451 ARHGEF12Q9NZN5 1544 aa33.84■■■■□ 3.01
RPA1-202ENST00000570451 FER1L4A9Z1Z3 1794 aa33.83■■■■□ 3.01
RPA1-202ENST00000570451 CEP162Q5TB80 1403 aa33.83■■■■□ 3.01
RPA1-202ENST00000570451 ITSN2Q9NZM3 1697 aa33.82■■■■□ 3
RPA1-202ENST00000570451 DIP2CQ9Y2E4 1556 aa33.8■■■■□ 3
RPA1-202ENST00000570451 MTUS2Q5JR59 1369 aa33.79■■■■□ 3
RPA1-202ENST00000570451 LMTK3Q96Q04 1460 aa33.77■■■■□ 3
RPA1-202ENST00000570451 MLH3Q9UHC1 1453 aa33.77■■■■□ 3
RPA1-202ENST00000570451 GPATCH8Q9UKJ3 1502 aaKnown RBP33.77■■■■□ 3
RPA1-202ENST00000570451 ABCA6Q8N139 1617 aa33.76■■■■□ 3
RPA1-202ENST00000570451 ILDR1Q86SU0 546 aaPredicted RBP33.74■■■□□ 2.99
RPA1-202ENST00000570451 CCNB3Q8WWL7 1395 aa33.73■■■□□ 2.99
RPA1-202ENST00000570451 SAMD9LQ8IVG5 1584 aa33.72■■■□□ 2.99
RPA1-202ENST00000570451 CFDP1Q9UEE9 299 aaPredicted RBP33.71■■■□□ 2.99
RPA1-202ENST00000570451 SYCP2Q9BX26 1530 aa33.7■■■□□ 2.99
RPA1-202ENST00000570451 REREQ9P2R6 1566 aa33.68■■■□□ 2.98
RPA1-202ENST00000570451 HNRNPMP52272 730 aaKnown RBP eCLIP33.68■■■□□ 2.98
RPA1-202ENST00000570451 HSPA2P54652 639 aa33.66■■■□□ 2.98
RPA1-202ENST00000570451 KIDINS220Q9ULH0 1771 aa33.65■■■□□ 2.98
RPA1-202ENST00000570451 EHBP1L1Q8N3D4 1523 aa33.64■■■□□ 2.98
RPA1-202ENST00000570451 CEBPAP49715 358 aaPredicted RBP33.64■■■□□ 2.98
RPA1-202ENST00000570451 SPAG9O60271 1321 aaKnown RBP33.63■■■□□ 2.97
RPA1-202ENST00000570451 LOC105371045A0A1W2PR82 267 aa33.63■■■□□ 2.97
RPA1-202ENST00000570451 PLEKHH2Q8IVE3 1493 aa33.62■■■□□ 2.97
RPA1-202ENST00000570451 AGLP35573 1532 aa33.58■■■□□ 2.97
RPA1-202ENST00000570451 ESF1Q9H501 851 aaKnown RBP33.58■■■□□ 2.97
RPA1-202ENST00000570451 KIAA1107Q9UPP5 1409 aa33.58■■■□□ 2.97
RPA1-202ENST00000570451 TIAM1Q13009 1591 aa33.58■■■□□ 2.97
RPA1-202ENST00000570451 ATP7AQ04656 1500 aa33.53■■■□□ 2.96
RPA1-202ENST00000570451 ZNF644Q9H582 1327 aaPredicted RBP33.53■■■□□ 2.96
RPA1-202ENST00000570451 PREX1Q8TCU6 1659 aa33.5■■■□□ 2.95
RPA1-202ENST00000570451 INO80Q9ULG1 1556 aaPredicted RBP33.47■■■□□ 2.95
RPA1-202ENST00000570451 SUPT6HQ7KZ85 1726 aaKnown RBP33.45■■■□□ 2.95
RPA1-202ENST00000570451 NCOA2Q15596 1464 aa33.45■■■□□ 2.95
RPA1-202ENST00000570451 VPS8Q8N3P4 1428 aa33.45■■■□□ 2.94
RPA1-202ENST00000570451 C3P01024 1663 aa33.44■■■□□ 2.94
RPA1-202ENST00000570451 UHRF1BP1Q6BDS2 1440 aa33.43■■■□□ 2.94
RPA1-202ENST00000570451 CNTLNQ9NXG0 1405 aa33.41■■■□□ 2.94
RPA1-202ENST00000570451 A2MP01023 1474 aa33.41■■■□□ 2.94
RPA1-202ENST00000570451 MBD5Q9P267 1494 aa33.39■■■□□ 2.94
RPA1-202ENST00000570451 PLXNC1O60486 1568 aa33.37■■■□□ 2.93
RPA1-202ENST00000570451 SETD1BQ9UPS6 1966 aaKnown RBP33.36■■■□□ 2.93
RPA1-202ENST00000570451 CAMSAP2Q08AD1 1489 aa33.35■■■□□ 2.93
RPA1-202ENST00000570451 FBXO41Q8TF61 875 aa33.33■■■□□ 2.93
RPA1-202ENST00000570451 ADGBQ8N7X0 1667 aa33.33■■■□□ 2.93
RPA1-202ENST00000570451 LRRC9Q6ZRR7 1453 aa33.32■■■□□ 2.92
RPA1-202ENST00000570451 GGT6Q6P531 493 aa33.32■■■□□ 2.92
RPA1-202ENST00000570451 CCDC141Q6ZP82 1450 aa33.29■■■□□ 2.92
RPA1-202ENST00000570451 MROH2AA6NES4 1674 aa33.29■■■□□ 2.92
RPA1-202ENST00000570451 RTEL1-TNFRSF6BF6WH68 1400 aa33.28■■■□□ 2.92
RPA1-202ENST00000570451 ZMYM3Q14202 1370 aa33.28■■■□□ 2.92
RPA1-202ENST00000570451 CLTCQ00610 1675 aaKnown RBP33.26■■■□□ 2.92
RPA1-202ENST00000570451 KANK4Q5T7N3 995 aaPredicted RBP33.23■■■□□ 2.91
RPA1-202ENST00000570451 RSPH4AQ5TD94 716 aa33.21■■■□□ 2.91
RPA1-202ENST00000570451 STRCQ7RTU9 1775 aa33.21■■■□□ 2.91
RPA1-202ENST00000570451 DHX29Q7Z478 1369 aaKnown RBP33.21■■■□□ 2.91
RPA1-202ENST00000570451 NPATQ14207 1427 aa33.2■■■□□ 2.91
RPA1-202ENST00000570451 DMRT2Q9Y5R5 561 aa33.2■■■□□ 2.91
RPA1-202ENST00000570451 MAP3K1Q13233 1512 aa33.19■■■□□ 2.9
RPA1-202ENST00000570451 ARHGEF5Q12774 1597 aa33.17■■■□□ 2.9
RPA1-202ENST00000570451 TSPY4P0CV99 314 aa33.16■■■□□ 2.9
RPA1-202ENST00000570451 TSPY10P0CW01 314 aa33.16■■■□□ 2.9
RPA1-202ENST00000570451 PPP6R1Q9UPN7 881 aa33.15■■■□□ 2.9
RPA1-202ENST00000570451 KIF3BO15066 747 aa33.14■■■□□ 2.9
RPA1-202ENST00000570451 CERKQ8TCT0 537 aa33.13■■■□□ 2.89
RPA1-202ENST00000570451 APLP2Q06481 763 aa33.11■■■□□ 2.89
RPA1-202ENST00000570451 PTPRKQ15262 1439 aa33.11■■■□□ 2.89
RPA1-202ENST00000570451 MYOM3Q5VTT5 1437 aa33.1■■■□□ 2.89
RPA1-202ENST00000570451 NCOA1Q15788 1441 aa33.07■■■□□ 2.88
RPA1-202ENST00000570451 CAMSAP1Q5T5Y3 1602 aa33.06■■■□□ 2.88
RPA1-202ENST00000570451 MYO3AQ8NEV4 1616 aa33.06■■■□□ 2.88
RPA1-202ENST00000570451 PTPRTO14522 1441 aa33.04■■■□□ 2.88
RPA1-202ENST00000570451 MIA2Q96PC5 1412 aa33.04■■■□□ 2.88
RPA1-202ENST00000570451 KDM5DQ9BY66 1539 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms