RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 CYB5RLQ6IPT4 315 aa11.36□□□□□ -0.59
UBFD1-209ENST00000569919 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
UBFD1-209ENST00000569919 URB2Q14146 1524 aaKnown RBP11.33□□□□□ -0.6
UBFD1-209ENST00000569919 WIZO95785 1651 aa11.33□□□□□ -0.6
UBFD1-209ENST00000569919 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
UBFD1-209ENST00000569919 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
UBFD1-209ENST00000569919 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
UBFD1-209ENST00000569919 HAX1O00165 279 aa11.29□□□□□ -0.6
UBFD1-209ENST00000569919 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
UBFD1-209ENST00000569919 TIE1P35590 1138 aa11.28□□□□□ -0.6
UBFD1-209ENST00000569919 MS4A4AQ96JQ5 239 aa11.28□□□□□ -0.6
UBFD1-209ENST00000569919 IFT140Q96RY7 1462 aa11.27□□□□□ -0.6
UBFD1-209ENST00000569919 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
UBFD1-209ENST00000569919 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
UBFD1-209ENST00000569919 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
UBFD1-209ENST00000569919 EVX2Q03828 476 aa11.25□□□□□ -0.61
UBFD1-209ENST00000569919 P3H3Q8IVL6 736 aa11.25□□□□□ -0.61
UBFD1-209ENST00000569919 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-209ENST00000569919 ZNF608Q9ULD9 1512 aaPredicted RBP11.24□□□□□ -0.61
UBFD1-209ENST00000569919 KCNV2Q8TDN2 545 aa11.21□□□□□ -0.61
UBFD1-209ENST00000569919 CLCN6P51797 869 aa11.19□□□□□ -0.62
UBFD1-209ENST00000569919 TRIM35Q9UPQ4 493 aa11.19□□□□□ -0.62
UBFD1-209ENST00000569919 ABCC8Q09428 1581 aa11.19□□□□□ -0.62
UBFD1-209ENST00000569919 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
UBFD1-209ENST00000569919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.18□□□□□ -0.623e-6■■□□□ 13.5
UBFD1-209ENST00000569919 TOP2AP11388 1531 aaKnown RBP11.17□□□□□ -0.62
UBFD1-209ENST00000569919 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
UBFD1-209ENST00000569919 NCKAP5LQ9HCH0 1330 aa11.16□□□□□ -0.62
UBFD1-209ENST00000569919 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
UBFD1-209ENST00000569919 ILDR1Q86SU0 546 aaPredicted RBP11.16□□□□□ -0.62
UBFD1-209ENST00000569919 AQRO60306 1485 aaKnown RBP eCLIP11.14□□□□□ -0.639e-7■□□□□ 10.9
UBFD1-209ENST00000569919 PDE4AP27815 886 aa11.14□□□□□ -0.63
UBFD1-209ENST00000569919 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
UBFD1-209ENST00000569919 E2F4Q16254 413 aa11.13□□□□□ -0.63
UBFD1-209ENST00000569919 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
UBFD1-209ENST00000569919 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
UBFD1-209ENST00000569919 ATN1P54259 1190 aaPredicted RBP11.11□□□□□ -0.63
UBFD1-209ENST00000569919 CRISPLD2Q9H0B8 497 aa11.11□□□□□ -0.63
UBFD1-209ENST00000569919 CHD1O14646 1710 aa11.09□□□□□ -0.63
UBFD1-209ENST00000569919 CCDC88BA6NC98 1476 aa11.09□□□□□ -0.63
UBFD1-209ENST00000569919 ATMINO43313 823 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-209ENST00000569919 DPY19L2Q6NUT2 758 aa11.09□□□□□ -0.63
UBFD1-209ENST00000569919 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
UBFD1-209ENST00000569919 MFSD10Q14728 455 aa11.08□□□□□ -0.64
UBFD1-209ENST00000569919 CHMP7Q8WUX9 453 aaPredicted RBP11.08□□□□□ -0.64
UBFD1-209ENST00000569919 ASTLQ6HA08 431 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-209ENST00000569919 DDX27Q96GQ7 796 aaKnown RBP11.07□□□□□ -0.64
UBFD1-209ENST00000569919 DNMBPQ6XZF7 1577 aa11.07□□□□□ -0.64
UBFD1-209ENST00000569919 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
UBFD1-209ENST00000569919 PDCD7Q8N8D1 485 aaKnown RBP11.05□□□□□ -0.64
UBFD1-209ENST00000569919 GABBR2O75899 941 aa11.04□□□□□ -0.64
UBFD1-209ENST00000569919 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
UBFD1-209ENST00000569919 SOGA1O94964 1423 aa11.03□□□□□ -0.64
UBFD1-209ENST00000569919 IRX5P78411 483 aaPredicted RBP11.03□□□□□ -0.64
UBFD1-209ENST00000569919 IER5LQ5T953 404 aa11.02□□□□□ -0.65
UBFD1-209ENST00000569919 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
UBFD1-209ENST00000569919 POLA1P09884 1462 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-209ENST00000569919 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
UBFD1-209ENST00000569919 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
UBFD1-209ENST00000569919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
UBFD1-209ENST00000569919 RAD54L2Q9Y4B4 1467 aa11□□□□□ -0.65
UBFD1-209ENST00000569919 CAMK2BQ13554 666 aa10.99□□□□□ -0.65
UBFD1-209ENST00000569919 CLASP1Q7Z460 1538 aa10.99□□□□□ -0.65
UBFD1-209ENST00000569919 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
UBFD1-209ENST00000569919 SEMA3EO15041 775 aa10.98□□□□□ -0.65
UBFD1-209ENST00000569919 PPP1R15BQ5SWA1 713 aa10.97□□□□□ -0.65
UBFD1-209ENST00000569919 LMOD2Q6P5Q4 547 aa10.97□□□□□ -0.65
UBFD1-209ENST00000569919 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
UBFD1-209ENST00000569919 SNAPC4Q5SXM2 1469 aa10.97□□□□□ -0.65
UBFD1-209ENST00000569919 MAGI1Q96QZ7 1491 aaPredicted RBP10.96□□□□□ -0.65
UBFD1-209ENST00000569919 PLCG2P16885 1265 aa10.96□□□□□ -0.65
UBFD1-209ENST00000569919 DCBLD2Q96PD2 775 aa10.96□□□□□ -0.65
UBFD1-209ENST00000569919 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
UBFD1-209ENST00000569919 GAPVD1Q14C86 1478 aa10.95□□□□□ -0.66
UBFD1-209ENST00000569919 TULP1O00294 542 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-209ENST00000569919 TMEM121BQ9BXQ6 578 aaPredicted RBP10.95□□□□□ -0.66
UBFD1-209ENST00000569919 WDR97A6NE52 1622 aa10.95□□□□□ -0.66
UBFD1-209ENST00000569919 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
UBFD1-209ENST00000569919 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
UBFD1-209ENST00000569919 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
UBFD1-209ENST00000569919 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
UBFD1-209ENST00000569919 G3V3G9 751 aa10.93□□□□□ -0.66
UBFD1-209ENST00000569919 DSG2Q14126 1118 aa10.93□□□□□ -0.66
UBFD1-209ENST00000569919 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
UBFD1-209ENST00000569919 FGD5Q6ZNL6 1462 aa10.9□□□□□ -0.66
UBFD1-209ENST00000569919 SEC24BO95487 1268 aa10.9□□□□□ -0.66
UBFD1-209ENST00000569919 FOXK1P85037 733 aa10.9□□□□□ -0.66
UBFD1-209ENST00000569919 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-209ENST00000569919 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-209ENST00000569919 C2orf72A6NCS6 295 aa10.88□□□□□ -0.67
UBFD1-209ENST00000569919 EMILIN3Q9NT22 766 aa10.88□□□□□ -0.67
UBFD1-209ENST00000569919 SLC39A7Q92504 469 aa10.87□□□□□ -0.67
UBFD1-209ENST00000569919 KIF3CO14782 793 aa10.86□□□□□ -0.67
UBFD1-209ENST00000569919 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
UBFD1-209ENST00000569919 PLPP6Q8IY26 295 aa10.86□□□□□ -0.67
UBFD1-209ENST00000569919 DPYSL4O14531 572 aa10.85□□□□□ -0.67
UBFD1-209ENST00000569919 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
UBFD1-209ENST00000569919 C7P10643 843 aa10.84□□□□□ -0.67
UBFD1-209ENST00000569919 POTEFA5A3E0 1075 aa10.83□□□□□ -0.68
UBFD1-209ENST00000569919 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms