RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
PDXDC1-216ENST00000569715 DAPK1P53355 1430 aa16.29■□□□□ 0.2
PDXDC1-216ENST00000569715 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
PDXDC1-216ENST00000569715 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
PDXDC1-216ENST00000569715 ABCC5O15440 1437 aa16.27■□□□□ 0.2
PDXDC1-216ENST00000569715 NAIPQ13075 1403 aa16.26■□□□□ 0.19
PDXDC1-216ENST00000569715 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
PDXDC1-216ENST00000569715 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
PDXDC1-216ENST00000569715 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
PDXDC1-216ENST00000569715 SAMD9LQ8IVG5 1584 aa16.24■□□□□ 0.19
PDXDC1-216ENST00000569715 RRP7BPQ9NSQ0 103 aa16.24■□□□□ 0.19
PDXDC1-216ENST00000569715 WDR7Q9Y4E6 1490 aa16.24■□□□□ 0.19
PDXDC1-216ENST00000569715 RIMBP3CA6NJZ7 1639 aa16.23■□□□□ 0.19
PDXDC1-216ENST00000569715 RIMBP3BA6NNM3 1639 aa16.23■□□□□ 0.19
PDXDC1-216ENST00000569715 RIMBP3Q9UFD9 1639 aa16.23■□□□□ 0.19
PDXDC1-216ENST00000569715 KDM6BO15054 1643 aa16.22■□□□□ 0.19
PDXDC1-216ENST00000569715 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
PDXDC1-216ENST00000569715 ASXL2Q76L83 1435 aa16.21■□□□□ 0.19
PDXDC1-216ENST00000569715 AKNAQ7Z591 1439 aa16.21■□□□□ 0.18
PDXDC1-216ENST00000569715 ADGBQ8N7X0 1667 aa16.19■□□□□ 0.18
PDXDC1-216ENST00000569715 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
PDXDC1-216ENST00000569715 ROCK1Q13464 1354 aa16.17■□□□□ 0.18
PDXDC1-216ENST00000569715 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
PDXDC1-216ENST00000569715 SYCP2Q9BX26 1530 aa16.17■□□□□ 0.18
PDXDC1-216ENST00000569715 HNRNPMP52272 730 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDXDC1-216ENST00000569715 PLCH2O75038 1416 aa16.16■□□□□ 0.18
PDXDC1-216ENST00000569715 ARHGEF5Q12774 1597 aa16.16■□□□□ 0.18
PDXDC1-216ENST00000569715 ABCA9Q8IUA7 1624 aa16.15■□□□□ 0.18
PDXDC1-216ENST00000569715 CYB5RLQ6IPT4 315 aa16.15■□□□□ 0.18
PDXDC1-216ENST00000569715 NPM1P06748 294 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDXDC1-216ENST00000569715 CLSPNQ9HAW4 1339 aa16.14■□□□□ 0.17
PDXDC1-216ENST00000569715 ADGRL2O95490 1459 aa16.14■□□□□ 0.17
PDXDC1-216ENST00000569715 SHANK2Q9UPX8 1470 aa16.13■□□□□ 0.17
PDXDC1-216ENST00000569715 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
PDXDC1-216ENST00000569715 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
PDXDC1-216ENST00000569715 ARHGEF12Q9NZN5 1544 aa16.12■□□□□ 0.17
PDXDC1-216ENST00000569715 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
PDXDC1-216ENST00000569715 ABCC1P33527 1531 aa16.1■□□□□ 0.17
PDXDC1-216ENST00000569715 ARAP3Q8WWN8 1544 aa16.1■□□□□ 0.17
PDXDC1-216ENST00000569715 ANKRD30AQ9BXX3 1397 aa16.08■□□□□ 0.17
PDXDC1-216ENST00000569715 KIAA1107Q9UPP5 1409 aa16.08■□□□□ 0.16
PDXDC1-216ENST00000569715 PLEKHH2Q8IVE3 1493 aa16.08■□□□□ 0.16
PDXDC1-216ENST00000569715 EFCAB2Q5VUJ9 269 aa16.08■□□□□ 0.16
PDXDC1-216ENST00000569715 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
PDXDC1-216ENST00000569715 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
PDXDC1-216ENST00000569715 FANCAO15360 1455 aa16.06■□□□□ 0.16
PDXDC1-216ENST00000569715 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
PDXDC1-216ENST00000569715 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
PDXDC1-216ENST00000569715 TRIM52Q96A61 297 aa16.05■□□□□ 0.16
PDXDC1-216ENST00000569715 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
PDXDC1-216ENST00000569715 KIF15Q9NS87 1388 aa16.03■□□□□ 0.16
PDXDC1-216ENST00000569715 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
PDXDC1-216ENST00000569715 ANKRD50Q9ULJ7 1429 aa16.03■□□□□ 0.16
PDXDC1-216ENST00000569715 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.15
PDXDC1-216ENST00000569715 CD109Q6YHK3 1445 aa16■□□□□ 0.15
PDXDC1-216ENST00000569715 PLXNC1O60486 1568 aa16■□□□□ 0.15
PDXDC1-216ENST00000569715 ADGRL1O94910 1474 aa15.99■□□□□ 0.15
PDXDC1-216ENST00000569715 NEUROD1Q13562 356 aa15.98■□□□□ 0.15
PDXDC1-216ENST00000569715 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
PDXDC1-216ENST00000569715 PZPP20742 1482 aa15.98■□□□□ 0.15
PDXDC1-216ENST00000569715 AFAP1Q8N556 730 aa15.97■□□□□ 0.15
PDXDC1-216ENST00000569715 ZFYVE16Q7Z3T8 1539 aa15.96■□□□□ 0.15
PDXDC1-216ENST00000569715 SCAPERQ9BY12 1400 aa15.96■□□□□ 0.15
PDXDC1-216ENST00000569715 FOXD1Q16676 465 aa15.96■□□□□ 0.15
PDXDC1-216ENST00000569715 MAP3K4Q9Y6R4 1608 aa15.96■□□□□ 0.14
PDXDC1-216ENST00000569715 CFAP74Q9C0B2 1584 aa15.94■□□□□ 0.14
PDXDC1-216ENST00000569715 DIP2BQ9P265 1576 aa15.93■□□□□ 0.14
PDXDC1-216ENST00000569715 INO80Q9ULG1 1556 aaPredicted RBP15.93■□□□□ 0.14
PDXDC1-216ENST00000569715 SPAG9O60271 1321 aaKnown RBP15.93■□□□□ 0.14
PDXDC1-216ENST00000569715 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
PDXDC1-216ENST00000569715 GLI2P10070 1586 aa15.92■□□□□ 0.14
PDXDC1-216ENST00000569715 ATP7AQ04656 1500 aa15.91■□□□□ 0.14
PDXDC1-216ENST00000569715 DUOX2Q9NRD8 1548 aa15.91■□□□□ 0.14
PDXDC1-216ENST00000569715 KDM5DQ9BY66 1539 aa15.9■□□□□ 0.14
PDXDC1-216ENST00000569715 ACIN1Q9UKV3 1341 aaKnown RBP15.9■□□□□ 0.14
PDXDC1-216ENST00000569715 NUP155O75694 1391 aa15.9■□□□□ 0.14
PDXDC1-216ENST00000569715 RTEL1-TNFRSF6BF6WH68 1400 aa15.9■□□□□ 0.14
PDXDC1-216ENST00000569715 UNC13BO14795 1591 aa15.89■□□□□ 0.13
PDXDC1-216ENST00000569715 KIDINS220Q9ULH0 1771 aa15.88■□□□□ 0.13
PDXDC1-216ENST00000569715 POGZQ7Z3K3 1410 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 FAM69CQ0P6D2 419 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 ZNF518AQ6AHZ1 1483 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 NEO1Q92859 1461 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 ERBINQ96RT1 1412 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 TSPOAP1O95153 1857 aa15.87■□□□□ 0.13
PDXDC1-216ENST00000569715 KDM5CP41229 1560 aa15.86■□□□□ 0.13
PDXDC1-216ENST00000569715 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
PDXDC1-216ENST00000569715 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
PDXDC1-216ENST00000569715 PKD2Q13563 968 aa15.85■□□□□ 0.13
PDXDC1-216ENST00000569715 KIF13AQ9H1H9 1805 aa15.84■□□□□ 0.13
PDXDC1-216ENST00000569715 TONSLQ96HA7 1378 aa15.84■□□□□ 0.13
PDXDC1-216ENST00000569715 MYT1LQ9UL68 1186 aa15.83■□□□□ 0.13
PDXDC1-216ENST00000569715 MAGI2Q86UL8 1455 aa15.83■□□□□ 0.12
PDXDC1-216ENST00000569715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.124e-7■■□□□ 12.8
PDXDC1-216ENST00000569715 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
PDXDC1-216ENST00000569715 HECW2Q9P2P5 1572 aa15.82■□□□□ 0.12
PDXDC1-216ENST00000569715 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
PDXDC1-216ENST00000569715 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
PDXDC1-216ENST00000569715 RAPGEF3O95398 923 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms