RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
KLHDC4-220ENST00000568338 CTTNBP2Q8WZ74 1663 aa13.82□□□□□ -0.2
KLHDC4-220ENST00000568338 ARID3CA6NKF2 412 aa13.82□□□□□ -0.2
KLHDC4-220ENST00000568338 ARHGEF40Q8TER5 1519 aa13.81□□□□□ -0.2
KLHDC4-220ENST00000568338 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
KLHDC4-220ENST00000568338 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
KLHDC4-220ENST00000568338 SPATA31D1Q6ZQQ2 1576 aa13.79□□□□□ -0.2
KLHDC4-220ENST00000568338 UBTFP17480 764 aaKnown RBP13.79□□□□□ -0.2
KLHDC4-220ENST00000568338 FANCAO15360 1455 aa13.78□□□□□ -0.2
KLHDC4-220ENST00000568338 ATP10BO94823 1461 aa13.78□□□□□ -0.2
KLHDC4-220ENST00000568338 DENND4BO75064 1496 aaPredicted RBP13.74□□□□□ -0.21
KLHDC4-220ENST00000568338 AKNAQ7Z591 1439 aa13.74□□□□□ -0.21
KLHDC4-220ENST00000568338 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
KLHDC4-220ENST00000568338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
KLHDC4-220ENST00000568338 HNRNPUL2Q1KMD3 747 aaKnown RBP13.73□□□□□ -0.21
KLHDC4-220ENST00000568338 SPINK5Q9NQ38 1064 aaPredicted RBP13.73□□□□□ -0.21
KLHDC4-220ENST00000568338 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
KLHDC4-220ENST00000568338 MYCNP04198 464 aaPredicted RBP13.71□□□□□ -0.21
KLHDC4-220ENST00000568338 EFCAB5A4FU69 1503 aa13.7□□□□□ -0.22
KLHDC4-220ENST00000568338 ZFYVE16Q7Z3T8 1539 aa13.7□□□□□ -0.22
KLHDC4-220ENST00000568338 TTC37Q6PGP7 1564 aa13.7□□□□□ -0.22
KLHDC4-220ENST00000568338 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
KLHDC4-220ENST00000568338 MLECQ14165 292 aa13.69□□□□□ -0.22
KLHDC4-220ENST00000568338 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
KLHDC4-220ENST00000568338 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
KLHDC4-220ENST00000568338 YEATS2Q9ULM3 1422 aa13.69□□□□□ -0.22
KLHDC4-220ENST00000568338 RICTORQ6R327 1708 aa13.69□□□□□ -0.22
KLHDC4-220ENST00000568338 ZBTB22O15209 634 aa13.68□□□□□ -0.22
KLHDC4-220ENST00000568338 PREX1Q8TCU6 1659 aa13.68□□□□□ -0.22
KLHDC4-220ENST00000568338 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
KLHDC4-220ENST00000568338 FER1L4A9Z1Z3 1794 aa13.68□□□□□ -0.22
KLHDC4-220ENST00000568338 RAPGEF6Q8TEU7 1601 aa13.67□□□□□ -0.22
KLHDC4-220ENST00000568338 CLIP1P30622 1438 aa13.66□□□□□ -0.22
KLHDC4-220ENST00000568338 MAGI2Q86UL8 1455 aa13.66□□□□□ -0.22
KLHDC4-220ENST00000568338 CAPN15O75808 1086 aa13.65□□□□□ -0.22
KLHDC4-220ENST00000568338 SAMD1Q6SPF0 538 aaPredicted RBP13.64□□□□□ -0.23
KLHDC4-220ENST00000568338 SIGLEC1Q9BZZ2 1709 aa13.64□□□□□ -0.23
KLHDC4-220ENST00000568338 UHRF1BP1Q6BDS2 1440 aa13.63□□□□□ -0.23
KLHDC4-220ENST00000568338 APLP2Q06481 763 aa13.62□□□□□ -0.23
KLHDC4-220ENST00000568338 ARHGEF12Q9NZN5 1544 aa13.62□□□□□ -0.23
KLHDC4-220ENST00000568338 NUP153P49790 1475 aaKnown RBP13.61□□□□□ -0.23
KLHDC4-220ENST00000568338 HECW1Q76N89 1606 aa13.61□□□□□ -0.23
KLHDC4-220ENST00000568338 PLEKHD1A6NEE1 506 aa13.6□□□□□ -0.23
KLHDC4-220ENST00000568338 STRCQ7RTU9 1775 aa13.6□□□□□ -0.23
KLHDC4-220ENST00000568338 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 PTPRTO14522 1441 aa13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 C9orf84Q5VXU9 1444 aa13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 CEBPAP49715 358 aaPredicted RBP13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
KLHDC4-220ENST00000568338 RANGAP1P46060 587 aaPredicted RBP13.58□□□□□ -0.24
KLHDC4-220ENST00000568338 ATP10AO60312 1499 aa13.58□□□□□ -0.24
KLHDC4-220ENST00000568338 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
KLHDC4-220ENST00000568338 SCAPERQ9BY12 1400 aa13.56□□□□□ -0.24
KLHDC4-220ENST00000568338 LTBP4Q8N2S1 1624 aa13.53□□□□□ -0.24
KLHDC4-220ENST00000568338 DSG3P32926 999 aa13.53□□□□□ -0.24
KLHDC4-220ENST00000568338 VPS8Q8N3P4 1428 aa13.53□□□□□ -0.24
KLHDC4-220ENST00000568338 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
KLHDC4-220ENST00000568338 PLCH2O75038 1416 aa13.49□□□□□ -0.25
KLHDC4-220ENST00000568338 ESF1Q9H501 851 aaKnown RBP13.49□□□□□ -0.25
KLHDC4-220ENST00000568338 UBAP1LF5GYI3 381 aa13.48□□□□□ -0.25
KLHDC4-220ENST00000568338 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
KLHDC4-220ENST00000568338 ZNF518AQ6AHZ1 1483 aa13.48□□□□□ -0.25
KLHDC4-220ENST00000568338 NCOA1Q15788 1441 aa13.47□□□□□ -0.25
KLHDC4-220ENST00000568338 FMN1Q68DA7 1419 aa13.47□□□□□ -0.25
KLHDC4-220ENST00000568338 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
KLHDC4-220ENST00000568338 C3P01024 1663 aa13.45□□□□□ -0.26
KLHDC4-220ENST00000568338 TRAPPC8Q9Y2L5 1435 aa13.45□□□□□ -0.26
KLHDC4-220ENST00000568338 FYCO1Q9BQS8 1478 aa13.43□□□□□ -0.26
KLHDC4-220ENST00000568338 CDK13Q14004 1512 aaKnown RBP13.43□□□□□ -0.26
KLHDC4-220ENST00000568338 KDM5CP41229 1560 aa13.42□□□□□ -0.26
KLHDC4-220ENST00000568338 REREQ9P2R6 1566 aa13.42□□□□□ -0.26
KLHDC4-220ENST00000568338 DIP2CQ9Y2E4 1556 aa13.42□□□□□ -0.26
KLHDC4-220ENST00000568338 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
KLHDC4-220ENST00000568338 MYO5CQ9NQX4 1742 aa13.42□□□□□ -0.26
KLHDC4-220ENST00000568338 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
KLHDC4-220ENST00000568338 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
KLHDC4-220ENST00000568338 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
KLHDC4-220ENST00000568338 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
KLHDC4-220ENST00000568338 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
KLHDC4-220ENST00000568338 AGLP35573 1532 aa13.39□□□□□ -0.27
KLHDC4-220ENST00000568338 ARHGAP5Q13017 1502 aa13.39□□□□□ -0.27
KLHDC4-220ENST00000568338 ABCB7O75027 752 aa13.39□□□□□ -0.27
KLHDC4-220ENST00000568338 ATF5Q9Y2D1 282 aaPredicted RBP13.39□□□□□ -0.27
KLHDC4-220ENST00000568338 ABCA6Q8N139 1617 aa13.38□□□□□ -0.27
KLHDC4-220ENST00000568338 NPATQ14207 1427 aa13.38□□□□□ -0.27
KLHDC4-220ENST00000568338 NCKAP5LQ9HCH0 1330 aa13.38□□□□□ -0.27
KLHDC4-220ENST00000568338 KIF14Q15058 1648 aa13.37□□□□□ -0.27
KLHDC4-220ENST00000568338 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
KLHDC4-220ENST00000568338 ATP1B4Q9UN42 357 aaPredicted RBP13.36□□□□□ -0.27
KLHDC4-220ENST00000568338 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
KLHDC4-220ENST00000568338 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
KLHDC4-220ENST00000568338 MAP3K1Q13233 1512 aa13.35□□□□□ -0.27
KLHDC4-220ENST00000568338 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
KLHDC4-220ENST00000568338 HSPA1LP34931 641 aa13.34□□□□□ -0.27
KLHDC4-220ENST00000568338 PIP4K2BP78356 416 aa13.34□□□□□ -0.27
KLHDC4-220ENST00000568338 PKD2Q13563 968 aa13.34□□□□□ -0.27
KLHDC4-220ENST00000568338 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
KLHDC4-220ENST00000568338 LRRIQ1Q96JM4 1722 aa13.33□□□□□ -0.27
KLHDC4-220ENST00000568338 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms