RNA–Protein interactions for RNA: ENST00000567507.1

LPCAT4-207, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-207ENST00000567507 YEATS2Q9ULM3 1422 aa13.45□□□□□ -0.26
LPCAT4-207ENST00000567507 ZFYVE16Q7Z3T8 1539 aa13.44□□□□□ -0.26
LPCAT4-207ENST00000567507 DENND4BO75064 1496 aaPredicted RBP13.43□□□□□ -0.26
LPCAT4-207ENST00000567507 FANCAO15360 1455 aa13.42□□□□□ -0.26
LPCAT4-207ENST00000567507 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
LPCAT4-207ENST00000567507 CFAP74Q9C0B2 1584 aa13.42□□□□□ -0.26
LPCAT4-207ENST00000567507 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
LPCAT4-207ENST00000567507 AKNAQ7Z591 1439 aa13.41□□□□□ -0.26
LPCAT4-207ENST00000567507 CASKIN1Q8WXD9 1431 aa13.41□□□□□ -0.26
LPCAT4-207ENST00000567507 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
LPCAT4-207ENST00000567507 HECW1Q76N89 1606 aa13.41□□□□□ -0.26
LPCAT4-207ENST00000567507 PLPPR3Q6T4P5 718 aa13.4□□□□□ -0.26
LPCAT4-207ENST00000567507 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
LPCAT4-207ENST00000567507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.39□□□□□ -0.27
LPCAT4-207ENST00000567507 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
LPCAT4-207ENST00000567507 POGZQ7Z3K3 1410 aa13.39□□□□□ -0.27
LPCAT4-207ENST00000567507 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
LPCAT4-207ENST00000567507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.36□□□□□ -0.27
LPCAT4-207ENST00000567507 HNRNPUL2Q1KMD3 747 aaKnown RBP13.36□□□□□ -0.27
LPCAT4-207ENST00000567507 MAGI2Q86UL8 1455 aa13.36□□□□□ -0.27
LPCAT4-207ENST00000567507 MLECQ14165 292 aa13.34□□□□□ -0.27
LPCAT4-207ENST00000567507 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
LPCAT4-207ENST00000567507 C3P01024 1663 aa13.33□□□□□ -0.28
LPCAT4-207ENST00000567507 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
LPCAT4-207ENST00000567507 PLEKHD1A6NEE1 506 aa13.32□□□□□ -0.28
LPCAT4-207ENST00000567507 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
LPCAT4-207ENST00000567507 TRIM26Q12899 539 aaPredicted RBP13.31□□□□□ -0.28
LPCAT4-207ENST00000567507 ATP10AO60312 1499 aa13.29□□□□□ -0.28
LPCAT4-207ENST00000567507 CDK11AQ9UQ88 783 aaPredicted RBP13.29□□□□□ -0.28
LPCAT4-207ENST00000567507 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
LPCAT4-207ENST00000567507 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
LPCAT4-207ENST00000567507 PLCH2O75038 1416 aa13.28□□□□□ -0.28
LPCAT4-207ENST00000567507 C9orf84Q5VXU9 1444 aa13.28□□□□□ -0.28
LPCAT4-207ENST00000567507 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.28
LPCAT4-207ENST00000567507 PTPRTO14522 1441 aa13.27□□□□□ -0.29
LPCAT4-207ENST00000567507 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 CDK13Q14004 1512 aaKnown RBP13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 IQSEC2Q5JU85 1478 aa13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 ATP1B4Q9UN42 357 aaPredicted RBP13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 DIP2CQ9Y2E4 1556 aa13.26□□□□□ -0.29
LPCAT4-207ENST00000567507 ABCA6Q8N139 1617 aa13.25□□□□□ -0.29
LPCAT4-207ENST00000567507 KDM5CP41229 1560 aa13.25□□□□□ -0.29
LPCAT4-207ENST00000567507 LRRC9Q6ZRR7 1453 aa13.24□□□□□ -0.29
LPCAT4-207ENST00000567507 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
LPCAT4-207ENST00000567507 REREQ9P2R6 1566 aa13.23□□□□□ -0.29
LPCAT4-207ENST00000567507 KIF14Q15058 1648 aa13.22□□□□□ -0.29
LPCAT4-207ENST00000567507 NCOA1Q15788 1441 aa13.22□□□□□ -0.29
LPCAT4-207ENST00000567507 MTUS2Q5JR59 1369 aa13.2□□□□□ -0.3
LPCAT4-207ENST00000567507 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
LPCAT4-207ENST00000567507 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
LPCAT4-207ENST00000567507 EFCAB2Q5VUJ9 269 aa13.18□□□□□ -0.3
LPCAT4-207ENST00000567507 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
LPCAT4-207ENST00000567507 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
LPCAT4-207ENST00000567507 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
LPCAT4-207ENST00000567507 CDC42BPBQ9Y5S2 1711 aa13.17□□□□□ -0.3
LPCAT4-207ENST00000567507 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
LPCAT4-207ENST00000567507 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
LPCAT4-207ENST00000567507 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
LPCAT4-207ENST00000567507 MROH2AA6NES4 1674 aa13.15□□□□□ -0.3
LPCAT4-207ENST00000567507 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
LPCAT4-207ENST00000567507 PPARGC1BQ86YN6 1023 aaKnown RBP13.15□□□□□ -0.3
LPCAT4-207ENST00000567507 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
LPCAT4-207ENST00000567507 KIDINS220Q9ULH0 1771 aa13.15□□□□□ -0.31
LPCAT4-207ENST00000567507 AGLP35573 1532 aa13.14□□□□□ -0.31
LPCAT4-207ENST00000567507 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
LPCAT4-207ENST00000567507 MYO3AQ8NEV4 1616 aa13.13□□□□□ -0.31
LPCAT4-207ENST00000567507 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
LPCAT4-207ENST00000567507 PCGF6Q9BYE7 350 aa13.13□□□□□ -0.31
LPCAT4-207ENST00000567507 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
LPCAT4-207ENST00000567507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.12□□□□□ -0.31
LPCAT4-207ENST00000567507 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
LPCAT4-207ENST00000567507 ZNF335Q9H4Z2 1342 aaPredicted RBP13.11□□□□□ -0.31
LPCAT4-207ENST00000567507 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
LPCAT4-207ENST00000567507 ABCC1P33527 1531 aa13.1□□□□□ -0.31
LPCAT4-207ENST00000567507 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
LPCAT4-207ENST00000567507 CCNB3Q8WWL7 1395 aa13.08□□□□□ -0.31
LPCAT4-207ENST00000567507 NCOA2Q15596 1464 aa13.08□□□□□ -0.32
LPCAT4-207ENST00000567507 CLTCQ00610 1675 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-207ENST00000567507 NPATQ14207 1427 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 ALKQ9UM73 1620 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 UBAP1LF5GYI3 381 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 TCOF1Q13428 1488 aaKnown RBP13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
LPCAT4-207ENST00000567507 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
LPCAT4-207ENST00000567507 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
LPCAT4-207ENST00000567507 CEP170BQ9Y4F5 1589 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-207ENST00000567507 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
LPCAT4-207ENST00000567507 PLA2R1Q13018 1463 aa13.04□□□□□ -0.32
LPCAT4-207ENST00000567507 ESF1Q9H501 851 aaKnown RBP13.04□□□□□ -0.32
LPCAT4-207ENST00000567507 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
LPCAT4-207ENST00000567507 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
LPCAT4-207ENST00000567507 FGD6Q6ZV73 1430 aa13.03□□□□□ -0.32
LPCAT4-207ENST00000567507 NEURL4Q96JN8 1562 aa13.03□□□□□ -0.32
LPCAT4-207ENST00000567507 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
LPCAT4-207ENST00000567507 SAMD9LQ8IVG5 1584 aa13.02□□□□□ -0.33
LPCAT4-207ENST00000567507 HSPA1LP34931 641 aa13□□□□□ -0.33
LPCAT4-207ENST00000567507 PKD2Q13563 968 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms