RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 ZNF644Q9H582 1327 aaPredicted RBP17.37■□□□□ 0.37
BBS4-213ENST00000567279 NAIPQ13075 1403 aa17.36■□□□□ 0.37
BBS4-213ENST00000567279 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
BBS4-213ENST00000567279 CHIC2Q9UKJ5 165 aa17.35■□□□□ 0.37
BBS4-213ENST00000567279 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.35■□□□□ 0.37
BBS4-213ENST00000567279 CDC42BPBQ9Y5S2 1711 aa17.35■□□□□ 0.37
BBS4-213ENST00000567279 ABCC5O15440 1437 aa17.34■□□□□ 0.37
BBS4-213ENST00000567279 AKNAQ7Z591 1439 aa17.34■□□□□ 0.37
BBS4-213ENST00000567279 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
BBS4-213ENST00000567279 ZNF777Q9ULD5 760 aaPredicted RBP17.34■□□□□ 0.37
BBS4-213ENST00000567279 MYO5CQ9NQX4 1742 aa17.34■□□□□ 0.37
BBS4-213ENST00000567279 ADGBQ8N7X0 1667 aa17.33■□□□□ 0.36
BBS4-213ENST00000567279 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
BBS4-213ENST00000567279 MAPKBP1O60336 1514 aa17.3■□□□□ 0.36
BBS4-213ENST00000567279 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
BBS4-213ENST00000567279 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
BBS4-213ENST00000567279 KCNH8Q96L42 1107 aa17.28■□□□□ 0.36
BBS4-213ENST00000567279 ROCK1Q13464 1354 aa17.28■□□□□ 0.36
BBS4-213ENST00000567279 KDM6BO15054 1643 aa17.28■□□□□ 0.36
BBS4-213ENST00000567279 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.36
BBS4-213ENST00000567279 ARHGEF5Q12774 1597 aa17.25■□□□□ 0.35
BBS4-213ENST00000567279 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
BBS4-213ENST00000567279 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
BBS4-213ENST00000567279 SYCP2Q9BX26 1530 aa17.22■□□□□ 0.35
BBS4-213ENST00000567279 C9orf84Q5VXU9 1444 aa17.21■□□□□ 0.34
BBS4-213ENST00000567279 ASXL2Q76L83 1435 aa17.21■□□□□ 0.34
BBS4-213ENST00000567279 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
BBS4-213ENST00000567279 PLCH2O75038 1416 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 NCOA1Q15788 1441 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 ABCA9Q8IUA7 1624 aa17.19■□□□□ 0.34
BBS4-213ENST00000567279 HNRNPMP52272 730 aaKnown RBP eCLIP17.18■□□□□ 0.34
BBS4-213ENST00000567279 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
BBS4-213ENST00000567279 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
BBS4-213ENST00000567279 PLEKHH2Q8IVE3 1493 aa17.18■□□□□ 0.34
BBS4-213ENST00000567279 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
BBS4-213ENST00000567279 TRIM52Q96A61 297 aa17.15■□□□□ 0.34
BBS4-213ENST00000567279 ABCC1P33527 1531 aa17.15■□□□□ 0.34
BBS4-213ENST00000567279 MAST1Q9Y2H9 1570 aa17.14■□□□□ 0.33
BBS4-213ENST00000567279 TSPY4P0CV99 314 aa17.14■□□□□ 0.33
BBS4-213ENST00000567279 TSPY10P0CW01 314 aa17.14■□□□□ 0.33
BBS4-213ENST00000567279 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
BBS4-213ENST00000567279 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
BBS4-213ENST00000567279 ARHGEF12Q9NZN5 1544 aa17.11■□□□□ 0.33
BBS4-213ENST00000567279 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
BBS4-213ENST00000567279 ACIN1Q9UKV3 1341 aaKnown RBP17.1■□□□□ 0.33
BBS4-213ENST00000567279 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
BBS4-213ENST00000567279 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
BBS4-213ENST00000567279 ANKRD50Q9ULJ7 1429 aa17.09■□□□□ 0.33
BBS4-213ENST00000567279 DENND4BO75064 1496 aaPredicted RBP17.09■□□□□ 0.33
BBS4-213ENST00000567279 NEUROD1Q13562 356 aa17.08■□□□□ 0.33
BBS4-213ENST00000567279 FANCAO15360 1455 aa17.08■□□□□ 0.33
BBS4-213ENST00000567279 PLXNC1O60486 1568 aa17.08■□□□□ 0.32
BBS4-213ENST00000567279 CYB5RLQ6IPT4 315 aa17.06■□□□□ 0.32
BBS4-213ENST00000567279 MPHOSPH9Q99550 1183 aa17.05■□□□□ 0.32
BBS4-213ENST00000567279 TRAPPC8Q9Y2L5 1435 aa17.04■□□□□ 0.32
BBS4-213ENST00000567279 PZPP20742 1482 aa17.04■□□□□ 0.32
BBS4-213ENST00000567279 CFAP74Q9C0B2 1584 aa17.03■□□□□ 0.32
BBS4-213ENST00000567279 ADGRL1O94910 1474 aa17.02■□□□□ 0.31
BBS4-213ENST00000567279 SLC4A1APQ9BWU0 796 aaKnown RBP17■□□□□ 0.31
BBS4-213ENST00000567279 CD109Q6YHK3 1445 aa17■□□□□ 0.31
BBS4-213ENST00000567279 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
BBS4-213ENST00000567279 KDM5DQ9BY66 1539 aa17■□□□□ 0.31
BBS4-213ENST00000567279 DUOX2Q9NRD8 1548 aa16.99■□□□□ 0.31
BBS4-213ENST00000567279 TONSLQ96HA7 1378 aa16.99■□□□□ 0.31
BBS4-213ENST00000567279 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
BBS4-213ENST00000567279 FOXD1Q16676 465 aa16.98■□□□□ 0.31
BBS4-213ENST00000567279 INO80Q9ULG1 1556 aaPredicted RBP16.98■□□□□ 0.31
BBS4-213ENST00000567279 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
BBS4-213ENST00000567279 TIMELESSQ9UNS1 1208 aa16.97■□□□□ 0.31
BBS4-213ENST00000567279 UNC13BO14795 1591 aa16.97■□□□□ 0.31
BBS4-213ENST00000567279 SPAG9O60271 1321 aaKnown RBP16.97■□□□□ 0.31
BBS4-213ENST00000567279 NUP155O75694 1391 aa16.96■□□□□ 0.31
BBS4-213ENST00000567279 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
BBS4-213ENST00000567279 AFAP1Q8N556 730 aa16.95■□□□□ 0.3
BBS4-213ENST00000567279 MAP3K4Q9Y6R4 1608 aa16.95■□□□□ 0.3
BBS4-213ENST00000567279 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
BBS4-213ENST00000567279 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
BBS4-213ENST00000567279 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
BBS4-213ENST00000567279 GLI2P10070 1586 aa16.92■□□□□ 0.3
BBS4-213ENST00000567279 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
BBS4-213ENST00000567279 DIP2BQ9P265 1576 aa16.91■□□□□ 0.3
BBS4-213ENST00000567279 ZNF518AQ6AHZ1 1483 aa16.91■□□□□ 0.3
BBS4-213ENST00000567279 PKD2Q13563 968 aa16.9■□□□□ 0.3
BBS4-213ENST00000567279 NEO1Q92859 1461 aa16.9■□□□□ 0.3
BBS4-213ENST00000567279 IQGAP3Q86VI3 1631 aa16.9■□□□□ 0.3
BBS4-213ENST00000567279 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
BBS4-213ENST00000567279 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.29
BBS4-213ENST00000567279 PPP1R15AO75807 674 aaPredicted RBP16.88■□□□□ 0.29
BBS4-213ENST00000567279 POGZQ7Z3K3 1410 aa16.88■□□□□ 0.29
BBS4-213ENST00000567279 MAGI2Q86UL8 1455 aa16.88■□□□□ 0.29
BBS4-213ENST00000567279 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
BBS4-213ENST00000567279 KDM5CP41229 1560 aa16.87■□□□□ 0.29
BBS4-213ENST00000567279 HECW2Q9P2P5 1572 aa16.86■□□□□ 0.29
BBS4-213ENST00000567279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
BBS4-213ENST00000567279 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
BBS4-213ENST00000567279 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms