RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 KIAA0556O60303 1618 aa15.34■□□□□ 0.05
TNRC6A-212ENST00000567232 CAMSAP1Q5T5Y3 1602 aa15.3■□□□□ 0.04
TNRC6A-212ENST00000567232 ALKQ9UM73 1620 aa15.28■□□□□ 0.04
TNRC6A-212ENST00000567232 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.04
TNRC6A-212ENST00000567232 ARID3CA6NKF2 412 aa15.26■□□□□ 0.03
TNRC6A-212ENST00000567232 ZFYVE16Q7Z3T8 1539 aa15.26■□□□□ 0.03
TNRC6A-212ENST00000567232 PTPRKQ15262 1439 aa15.25■□□□□ 0.03
TNRC6A-212ENST00000567232 FHOD3Q2V2M9 1422 aa15.25■□□□□ 0.03
TNRC6A-212ENST00000567232 TRIM52Q96A61 297 aa15.24■□□□□ 0.03
TNRC6A-212ENST00000567232 RBM33Q96EV2 1170 aaKnown RBP15.23■□□□□ 0.03
TNRC6A-212ENST00000567232 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
TNRC6A-212ENST00000567232 IQGAP2Q13576 1575 aa15.23■□□□□ 0.03
TNRC6A-212ENST00000567232 IGF1RP08069 1367 aa15.23■□□□□ 0.03
TNRC6A-212ENST00000567232 RICTORQ6R327 1708 aa15.22■□□□□ 0.03
TNRC6A-212ENST00000567232 PKD2Q13563 968 aa15.21■□□□□ 0.03
TNRC6A-212ENST00000567232 ABCA9Q8IUA7 1624 aa15.21■□□□□ 0.02
TNRC6A-212ENST00000567232 EFCAB5A4FU69 1503 aa15.19■□□□□ 0.02
TNRC6A-212ENST00000567232 BIVM-ERCC5R4GMW8 1640 aa15.18■□□□□ 0.02
TNRC6A-212ENST00000567232 CPS1P31327 1500 aa15.16■□□□□ 0.02
TNRC6A-212ENST00000567232 ZMYM4Q5VZL5 1548 aa15.15■□□□□ 0.02
TNRC6A-212ENST00000567232 C3P01024 1663 aa15.14■□□□□ 0.01
TNRC6A-212ENST00000567232 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
TNRC6A-212ENST00000567232 SETBP1Q9Y6X0 1596 aa15.14■□□□□ 0.01
TNRC6A-212ENST00000567232 ATP10AO60312 1499 aa15.13■□□□□ 0.01
TNRC6A-212ENST00000567232 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
TNRC6A-212ENST00000567232 SHANK2Q9UPX8 1470 aa15.13■□□□□ 0.01
TNRC6A-212ENST00000567232 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
TNRC6A-212ENST00000567232 TCOF1Q13428 1488 aaKnown RBP15.1■□□□□ 0.01
TNRC6A-212ENST00000567232 ABCA8O94911 1581 aa15.1■□□□□ 0.01
TNRC6A-212ENST00000567232 HECW1Q76N89 1606 aa15.1■□□□□ 0.01
TNRC6A-212ENST00000567232 ESF1Q9H501 851 aaKnown RBP15.09■□□□□ 0.01
TNRC6A-212ENST00000567232 RAPGEF2Q9Y4G8 1499 aa15.08■□□□□ 0
TNRC6A-212ENST00000567232 UGGT2Q9NYU1 1516 aa15.07■□□□□ 0
TNRC6A-212ENST00000567232 CARMIL1Q5VZK9 1371 aa15.07■□□□□ 0
TNRC6A-212ENST00000567232 PLA2R1Q13018 1463 aa15.07■□□□□ 0
TNRC6A-212ENST00000567232 ATP10BO94823 1461 aa15.05■□□□□ -0
TNRC6A-212ENST00000567232 LRRC7Q96NW7 1537 aa15.02■□□□□ -0
TNRC6A-212ENST00000567232 RXRBP28702 533 aa14.99□□□□□ -0.01
TNRC6A-212ENST00000567232 YY1P25490 414 aa14.97□□□□□ -0.01
TNRC6A-212ENST00000567232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
TNRC6A-212ENST00000567232 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
TNRC6A-212ENST00000567232 ZNF772Q68DY9 489 aaPredicted RBP14.96□□□□□ -0.01
TNRC6A-212ENST00000567232 NPATQ14207 1427 aa14.95□□□□□ -0.02
TNRC6A-212ENST00000567232 SCAPERQ9BY12 1400 aa14.95□□□□□ -0.02
TNRC6A-212ENST00000567232 VWDEQ8N2E2 1590 aa14.94□□□□□ -0.02
TNRC6A-212ENST00000567232 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
TNRC6A-212ENST00000567232 SENP3-EIF4A1A0A087X0R7 540 aa14.92□□□□□ -0.02
TNRC6A-212ENST00000567232 SUPT6HQ7KZ85 1726 aaKnown RBP14.9□□□□□ -0.02
TNRC6A-212ENST00000567232 CEP170BQ9Y4F5 1589 aaPredicted RBP14.9□□□□□ -0.02
TNRC6A-212ENST00000567232 RNF17Q9BXT8 1623 aaKnown RBP14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 NUTM2DQ5VT03 806 aaPredicted RBP14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 MYT1LQ9UL68 1186 aa14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 CFAP74Q9C0B2 1584 aa14.89□□□□□ -0.03
TNRC6A-212ENST00000567232 ZMYM3Q14202 1370 aa14.88□□□□□ -0.03
TNRC6A-212ENST00000567232 FAM135BQ49AJ0 1406 aa14.87□□□□□ -0.03
TNRC6A-212ENST00000567232 CNTLNQ9NXG0 1405 aa14.87□□□□□ -0.03
TNRC6A-212ENST00000567232 MEX3CQ5U5Q3 659 aaKnown RBP14.87□□□□□ -0.03
TNRC6A-212ENST00000567232 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
TNRC6A-212ENST00000567232 ZNF142P52746 1687 aaPredicted RBP14.86□□□□□ -0.03
TNRC6A-212ENST00000567232 MYO3AQ8NEV4 1616 aa14.85□□□□□ -0.03
TNRC6A-212ENST00000567232 CDK12Q9NYV4 1490 aaPredicted RBP14.85□□□□□ -0.03
TNRC6A-212ENST00000567232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.85□□□□□ -0.03
TNRC6A-212ENST00000567232 AGLP35573 1532 aa14.82□□□□□ -0.04
TNRC6A-212ENST00000567232 POTEDQ86YR6 584 aa14.81□□□□□ -0.04
TNRC6A-212ENST00000567232 AFAP1Q8N556 730 aa14.81□□□□□ -0.04
TNRC6A-212ENST00000567232 LRP6O75581 1613 aa14.81□□□□□ -0.04
TNRC6A-212ENST00000567232 JCADQ9P266 1359 aa14.8□□□□□ -0.04
TNRC6A-212ENST00000567232 RGS12O14924 1447 aa14.8□□□□□ -0.04
TNRC6A-212ENST00000567232 GOLGA3Q08378 1498 aa14.8□□□□□ -0.04
TNRC6A-212ENST00000567232 STRCP1A6NGW2 1772 aa14.79□□□□□ -0.04
TNRC6A-212ENST00000567232 ANKLE2Q86XL3 938 aa14.78□□□□□ -0.04
TNRC6A-212ENST00000567232 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
TNRC6A-212ENST00000567232 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.04
TNRC6A-212ENST00000567232 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
TNRC6A-212ENST00000567232 LRP5O75197 1615 aa14.76□□□□□ -0.05
TNRC6A-212ENST00000567232 DNMT1P26358 1616 aaKnown RBP14.76□□□□□ -0.05
TNRC6A-212ENST00000567232 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
TNRC6A-212ENST00000567232 POLR1AO95602 1720 aaPredicted RBP14.75□□□□□ -0.05
TNRC6A-212ENST00000567232 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
TNRC6A-212ENST00000567232 A2ML1A8K2U0 1454 aa14.75□□□□□ -0.05
TNRC6A-212ENST00000567232 NPHP4O75161 1426 aaPredicted RBP14.75□□□□□ -0.05
TNRC6A-212ENST00000567232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.74□□□□□ -0.05
TNRC6A-212ENST00000567232 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
TNRC6A-212ENST00000567232 REREQ9P2R6 1566 aa14.73□□□□□ -0.05
TNRC6A-212ENST00000567232 SYNMO15061 1565 aa14.71□□□□□ -0.05
TNRC6A-212ENST00000567232 MROH2AA6NES4 1674 aa14.71□□□□□ -0.06
TNRC6A-212ENST00000567232 ROBO1Q9Y6N7 1651 aa14.71□□□□□ -0.06
TNRC6A-212ENST00000567232 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
TNRC6A-212ENST00000567232 ZNF518AQ6AHZ1 1483 aa14.69□□□□□ -0.06
TNRC6A-212ENST00000567232 AFF2P51816 1311 aa14.68□□□□□ -0.06
TNRC6A-212ENST00000567232 SPATA31A6Q5VVP1 1343 aa14.68□□□□□ -0.06
TNRC6A-212ENST00000567232 ABCA6Q8N139 1617 aa14.68□□□□□ -0.06
TNRC6A-212ENST00000567232 RBM6P78332 1123 aaKnown RBP14.68□□□□□ -0.06
TNRC6A-212ENST00000567232 PLCH2O75038 1416 aa14.67□□□□□ -0.06
TNRC6A-212ENST00000567232 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
TNRC6A-212ENST00000567232 QTRT2Q9H974 415 aaKnown RBP14.67□□□□□ -0.06
TNRC6A-212ENST00000567232 MED14O60244 1454 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms