RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 ARAP3Q8WWN8 1544 aa21.62■■□□□ 1.05
SPG7-215ENST00000566682 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
SPG7-215ENST00000566682 AKNAQ7Z591 1439 aa21.6■■□□□ 1.05
SPG7-215ENST00000566682 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
SPG7-215ENST00000566682 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
SPG7-215ENST00000566682 EFCAB2Q5VUJ9 269 aa21.58■■□□□ 1.05
SPG7-215ENST00000566682 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.04
SPG7-215ENST00000566682 MAP3K1Q13233 1512 aa21.57■■□□□ 1.04
SPG7-215ENST00000566682 ARHGAP5Q13017 1502 aa21.56■■□□□ 1.04
SPG7-215ENST00000566682 PREX2Q70Z35 1606 aa21.56■■□□□ 1.04
SPG7-215ENST00000566682 RAPGEF3O95398 923 aa21.54■■□□□ 1.04
SPG7-215ENST00000566682 APLP2Q06481 763 aa21.54■■□□□ 1.04
SPG7-215ENST00000566682 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
SPG7-215ENST00000566682 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
SPG7-215ENST00000566682 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
SPG7-215ENST00000566682 MAPK8IP2Q13387 824 aaPredicted RBP21.52■■□□□ 1.04
SPG7-215ENST00000566682 SUPT6HQ7KZ85 1726 aaKnown RBP21.52■■□□□ 1.03
SPG7-215ENST00000566682 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.03
SPG7-215ENST00000566682 ADGRL1O94910 1474 aa21.52■■□□□ 1.03
SPG7-215ENST00000566682 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
SPG7-215ENST00000566682 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
SPG7-215ENST00000566682 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
SPG7-215ENST00000566682 FRMPD1Q5SYB0 1578 aa21.49■■□□□ 1.03
SPG7-215ENST00000566682 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
SPG7-215ENST00000566682 CFDP1Q9UEE9 299 aaPredicted RBP21.46■■□□□ 1.03
SPG7-215ENST00000566682 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
SPG7-215ENST00000566682 ZNF777Q9ULD5 760 aaPredicted RBP21.45■■□□□ 1.02
SPG7-215ENST00000566682 DMRT2Q9Y5R5 561 aa21.45■■□□□ 1.02
SPG7-215ENST00000566682 POGZQ7Z3K3 1410 aa21.42■■□□□ 1.02
SPG7-215ENST00000566682 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
SPG7-215ENST00000566682 ABCC1P33527 1531 aa21.41■■□□□ 1.02
SPG7-215ENST00000566682 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
SPG7-215ENST00000566682 ARHGEF12Q9NZN5 1544 aa21.4■■□□□ 1.02
SPG7-215ENST00000566682 AFAP1Q8N556 730 aa21.39■■□□□ 1.01
SPG7-215ENST00000566682 ZMYM4Q5VZL5 1548 aa21.39■■□□□ 1.01
SPG7-215ENST00000566682 ZNF518AQ6AHZ1 1483 aa21.38■■□□□ 1.01
SPG7-215ENST00000566682 ZNF644Q9H582 1327 aaPredicted RBP21.36■■□□□ 1.01
SPG7-215ENST00000566682 HNRNPMP52272 730 aaKnown RBP eCLIP21.36■■□□□ 1.01
SPG7-215ENST00000566682 TRAPPC8Q9Y2L5 1435 aa21.36■■□□□ 1.01
SPG7-215ENST00000566682 SYCP2Q9BX26 1530 aa21.34■■□□□ 1.01
SPG7-215ENST00000566682 MAGI2Q86UL8 1455 aa21.34■■□□□ 1.01
SPG7-215ENST00000566682 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
SPG7-215ENST00000566682 KIAA1107Q9UPP5 1409 aa21.34■■□□□ 1.01
SPG7-215ENST00000566682 KDM5CP41229 1560 aa21.34■■□□□ 1.01
SPG7-215ENST00000566682 YEATS2Q9ULM3 1422 aa21.32■■□□□ 1
SPG7-215ENST00000566682 ZFYVE16Q7Z3T8 1539 aa21.32■■□□□ 1
SPG7-215ENST00000566682 MYOM3Q5VTT5 1437 aa21.31■■□□□ 1
SPG7-215ENST00000566682 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
SPG7-215ENST00000566682 MYT1LQ9UL68 1186 aa21.3■■□□□ 1
SPG7-215ENST00000566682 HECW2Q9P2P5 1572 aa21.29■■□□□ 1
SPG7-215ENST00000566682 CAMSAP2Q08AD1 1489 aa21.29■■□□□ 1
SPG7-215ENST00000566682 MIA2Q96PC5 1412 aa21.28■■□□□ 1
SPG7-215ENST00000566682 MBD5Q9P267 1494 aa21.27■■□□□ 1
SPG7-215ENST00000566682 MLH3Q9UHC1 1453 aa21.27■■□□□ 1
SPG7-215ENST00000566682 KDM4FA0A1W2PPD8 638 aa21.26■□□□□ 0.99
SPG7-215ENST00000566682 KIDINS220Q9ULH0 1771 aa21.25■□□□□ 0.99
SPG7-215ENST00000566682 ATP10AO60312 1499 aa21.24■□□□□ 0.99
SPG7-215ENST00000566682 SPAG9O60271 1321 aaKnown RBP21.24■□□□□ 0.99
SPG7-215ENST00000566682 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
SPG7-215ENST00000566682 ARID4BQ4LE39 1312 aaPredicted RBP21.23■□□□□ 0.99
SPG7-215ENST00000566682 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
SPG7-215ENST00000566682 DIP2CQ9Y2E4 1556 aa21.22■□□□□ 0.99
SPG7-215ENST00000566682 ABCA6Q8N139 1617 aa21.22■□□□□ 0.99
SPG7-215ENST00000566682 SIGLEC1Q9BZZ2 1709 aa21.21■□□□□ 0.99
SPG7-215ENST00000566682 C9orf84Q5VXU9 1444 aa21.2■□□□□ 0.98
SPG7-215ENST00000566682 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
SPG7-215ENST00000566682 PTPN23Q9H3S7 1636 aa21.19■□□□□ 0.98
SPG7-215ENST00000566682 FGD6Q6ZV73 1430 aa21.19■□□□□ 0.98
SPG7-215ENST00000566682 CCDC141Q6ZP82 1450 aa21.19■□□□□ 0.98
SPG7-215ENST00000566682 ATP7AQ04656 1500 aa21.19■□□□□ 0.98
SPG7-215ENST00000566682 INO80Q9ULG1 1556 aaPredicted RBP21.19■□□□□ 0.98
SPG7-215ENST00000566682 BCORL1Q5H9F3 1711 aa21.16■□□□□ 0.98
SPG7-215ENST00000566682 RTEL1-TNFRSF6BF6WH68 1400 aa21.15■□□□□ 0.98
SPG7-215ENST00000566682 REREQ9P2R6 1566 aa21.14■□□□□ 0.98
SPG7-215ENST00000566682 TCOF1Q13428 1488 aaKnown RBP21.14■□□□□ 0.98
SPG7-215ENST00000566682 TSPY4P0CV99 314 aa21.14■□□□□ 0.97
SPG7-215ENST00000566682 TSPY10P0CW01 314 aa21.14■□□□□ 0.97
SPG7-215ENST00000566682 ADAMTSL3P82987 1691 aa21.13■□□□□ 0.97
SPG7-215ENST00000566682 MLECQ14165 292 aa21.11■□□□□ 0.97
SPG7-215ENST00000566682 ADGBQ8N7X0 1667 aa21.09■□□□□ 0.97
SPG7-215ENST00000566682 FAM50AQ14320 339 aaKnown RBP21.08■□□□□ 0.97
SPG7-215ENST00000566682 MAST1Q9Y2H9 1570 aa21.08■□□□□ 0.97
SPG7-215ENST00000566682 AGLP35573 1532 aa21.08■□□□□ 0.96
SPG7-215ENST00000566682 DNMT1P26358 1616 aaKnown RBP21.07■□□□□ 0.96
SPG7-215ENST00000566682 A2MP01023 1474 aa21.07■□□□□ 0.96
SPG7-215ENST00000566682 ABCC5O15440 1437 aa21.07■□□□□ 0.96
SPG7-215ENST00000566682 MADDQ8WXG6 1647 aa21.07■□□□□ 0.96
SPG7-215ENST00000566682 CROCC2H7BZ55 1655 aa21.05■□□□□ 0.96
SPG7-215ENST00000566682 DAPK1P53355 1430 aa21.05■□□□□ 0.96
SPG7-215ENST00000566682 PLXNC1O60486 1568 aa21.05■□□□□ 0.96
SPG7-215ENST00000566682 DHX29Q7Z478 1369 aaKnown RBP21.03■□□□□ 0.96
SPG7-215ENST00000566682 FER1L4A9Z1Z3 1794 aa21.02■□□□□ 0.96
SPG7-215ENST00000566682 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.95
SPG7-215ENST00000566682 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
SPG7-215ENST00000566682 PTPRMP28827 1452 aa21■□□□□ 0.95
SPG7-215ENST00000566682 CHIC2Q9UKJ5 165 aa20.98■□□□□ 0.95
SPG7-215ENST00000566682 KIF3BO15066 747 aa20.95■□□□□ 0.94
SPG7-215ENST00000566682 GGT6Q6P531 493 aa20.95■□□□□ 0.94
SPG7-215ENST00000566682 PPP4R3CPQ6ZMV5 832 aa20.95■□□□□ 0.94
SPG7-215ENST00000566682 RRP7BPQ9NSQ0 103 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms