RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 PLCB2Q00722 1185 aa6.8□□□□□ -1.32
HERPUD1-211ENST00000566550 MICALL2Q8IY33 904 aa6.8□□□□□ -1.32
HERPUD1-211ENST00000566550 ANKRD13DQ6ZTN6 518 aa6.79□□□□□ -1.32
HERPUD1-211ENST00000566550 GPR153Q6NV75 609 aa6.78□□□□□ -1.32
HERPUD1-211ENST00000566550 IFNLR1Q8IU57 520 aaPredicted RBP6.77□□□□□ -1.33
HERPUD1-211ENST00000566550 BCANQ96GW7 911 aa6.77□□□□□ -1.33
HERPUD1-211ENST00000566550 DCAF8L2P0C7V8 631 aa6.75□□□□□ -1.33
HERPUD1-211ENST00000566550 ARSIQ5FYB1 569 aa6.75□□□□□ -1.33
HERPUD1-211ENST00000566550 ZNF316A6NFI3 1004 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-211ENST00000566550 PBX2P40425 430 aa6.73□□□□□ -1.33
HERPUD1-211ENST00000566550 TMEM92Q6UXU6 159 aa6.73□□□□□ -1.33
HERPUD1-211ENST00000566550 TAOK2Q9UL54 1235 aa6.73□□□□□ -1.33
HERPUD1-211ENST00000566550 RIOK3O14730 519 aaKnown RBP6.72□□□□□ -1.33
HERPUD1-211ENST00000566550 LSM11P83369 360 aaKnown RBP eCLIP6.72□□□□□ -1.33
HERPUD1-211ENST00000566550 VGFO15240 615 aaPredicted RBP6.71□□□□□ -1.34
HERPUD1-211ENST00000566550 NLRP6P59044 892 aa6.7□□□□□ -1.34
HERPUD1-211ENST00000566550 PLA2G2EQ9NZK7 142 aa6.69□□□□□ -1.34
HERPUD1-211ENST00000566550 HCSTQ9UBK5 93 aa6.69□□□□□ -1.34
HERPUD1-211ENST00000566550 PHF8Q9UPP1 1060 aa6.69□□□□□ -1.34
HERPUD1-211ENST00000566550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-211ENST00000566550 TPRNQ4KMQ1 711 aa6.67□□□□□ -1.34
HERPUD1-211ENST00000566550 ZFP91Q96JP5 570 aaPredicted RBP6.67□□□□□ -1.34
HERPUD1-211ENST00000566550 MS4A4AQ96JQ5 239 aa6.67□□□□□ -1.34
HERPUD1-211ENST00000566550 KHSRPQ92945 711 aaKnown RBP eCLIP6.65□□□□□ -1.34
HERPUD1-211ENST00000566550 PSDA5PKW4 1024 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-211ENST00000566550 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
HERPUD1-211ENST00000566550 NUDT7P0C024 238 aa6.63□□□□□ -1.35
HERPUD1-211ENST00000566550 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
HERPUD1-211ENST00000566550 LHX6Q9UPM6 363 aa6.61□□□□□ -1.35
HERPUD1-211ENST00000566550 ARHGAP33O14559 1287 aa6.6□□□□□ -1.35
HERPUD1-211ENST00000566550 SLC34A2O95436 690 aa6.6□□□□□ -1.35
HERPUD1-211ENST00000566550 PCDHGA4Q9Y5G9 962 aa6.6□□□□□ -1.35
HERPUD1-211ENST00000566550 C2orf72A6NCS6 295 aa6.59□□□□□ -1.35
HERPUD1-211ENST00000566550 AXIN2Q9Y2T1 843 aa6.59□□□□□ -1.35
HERPUD1-211ENST00000566550 STK24Q9Y6E0 443 aa6.59□□□□□ -1.35
HERPUD1-211ENST00000566550 ADGRD1Q6QNK2 874 aa6.58□□□□□ -1.36
HERPUD1-211ENST00000566550 VSIG10Q8N0Z9 540 aa6.58□□□□□ -1.36
HERPUD1-211ENST00000566550 FBXO22Q8NEZ5 403 aa6.58□□□□□ -1.36
HERPUD1-211ENST00000566550 RNF25Q96BH1 459 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-211ENST00000566550 BCL11BQ9C0K0 894 aaPredicted RBP6.58□□□□□ -1.36
HERPUD1-211ENST00000566550 TK2O00142 265 aa6.57□□□□□ -1.36
HERPUD1-211ENST00000566550 KCNH8Q96L42 1107 aa6.57□□□□□ -1.36
HERPUD1-211ENST00000566550 KIF3CO14782 793 aa6.56□□□□□ -1.36
HERPUD1-211ENST00000566550 STK25O00506 426 aa6.54□□□□□ -1.36
HERPUD1-211ENST00000566550 POTEEQ6S8J3 1075 aa6.53□□□□□ -1.36
HERPUD1-211ENST00000566550 MFRPQ9BY79 579 aa6.53□□□□□ -1.36
HERPUD1-211ENST00000566550 TBC1D12O60347 775 aa6.52□□□□□ -1.37
HERPUD1-211ENST00000566550 RGS20O76081 388 aa6.52□□□□□ -1.37
HERPUD1-211ENST00000566550 PPP4R3BQ5MIZ7 849 aa6.52□□□□□ -1.37
HERPUD1-211ENST00000566550 KCTD12Q96CX2 325 aaKnown RBP6.52□□□□□ -1.37
HERPUD1-211ENST00000566550 TIMELESSQ9UNS1 1208 aa6.51□□□□□ -1.37
HERPUD1-211ENST00000566550 TULP1O00294 542 aaPredicted RBP6.49□□□□□ -1.37
HERPUD1-211ENST00000566550 KDM2AQ9Y2K7 1162 aa6.49□□□□□ -1.37
HERPUD1-211ENST00000566550 HRO43593 1189 aa6.48□□□□□ -1.37
HERPUD1-211ENST00000566550 PSEN2P49810 448 aa6.47□□□□□ -1.37
HERPUD1-211ENST00000566550 DMRTA1Q5VZB9 504 aa6.47□□□□□ -1.37
HERPUD1-211ENST00000566550 PTCD2Q8WV60 388 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-211ENST00000566550 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
HERPUD1-211ENST00000566550 DAXXQ9UER7 740 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-211ENST00000566550 PTPN5P54829 565 aa6.46□□□□□ -1.38
HERPUD1-211ENST00000566550 PAXIP1Q6ZW49 1069 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-211ENST00000566550 IRX2Q9BZI1 471 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-211ENST00000566550 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-211ENST00000566550 GOLGA8CPA6NN73 597 aa6.45□□□□□ -1.38
HERPUD1-211ENST00000566550 ECM2O94769 699 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-211ENST00000566550 IFFO2Q5TF58 517 aa6.44□□□□□ -1.38
HERPUD1-211ENST00000566550 PKD2Q13563 968 aa6.43□□□□□ -1.38
HERPUD1-211ENST00000566550 PLPP6Q8IY26 295 aa6.43□□□□□ -1.38
HERPUD1-211ENST00000566550 KCNK17Q96T54 332 aa6.43□□□□□ -1.38
HERPUD1-211ENST00000566550 FOXK1P85037 733 aa6.42□□□□□ -1.38
HERPUD1-211ENST00000566550 KDM4FA0A1W2PPD8 638 aa6.41□□□□□ -1.38
HERPUD1-211ENST00000566550 SLC4A5Q9BY07 1137 aa6.4□□□□□ -1.38
HERPUD1-211ENST00000566550 VPS9D1Q9Y2B5 631 aa6.4□□□□□ -1.38
HERPUD1-211ENST00000566550 BBXQ8WY36 941 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-211ENST00000566550 ARXQ96QS3 562 aa6.39□□□□□ -1.39
HERPUD1-211ENST00000566550 GPHNQ9NQX3 736 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-211ENST00000566550 A0A0G2JS52 829 aa6.38□□□□□ -1.39
HERPUD1-211ENST00000566550 MRPL50Q8N5N7 158 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-211ENST00000566550 PTPREP23469 700 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 NBR1Q14596 966 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 THSD4Q6ZMP0 1018 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 ZNF454Q8N9F8 522 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 WNT2BQ93097 391 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 GTF3C3Q9Y5Q9 886 aa6.37□□□□□ -1.39
HERPUD1-211ENST00000566550 PPP1R37O75864 691 aa6.36□□□□□ -1.39
HERPUD1-211ENST00000566550 NBPF3Q9H094 633 aa6.36□□□□□ -1.39
HERPUD1-211ENST00000566550 DSG2Q14126 1118 aa6.35□□□□□ -1.39
HERPUD1-211ENST00000566550 BCL2L12Q9HB09 334 aa6.35□□□□□ -1.39
HERPUD1-211ENST00000566550 TSHZ2Q9NRE2 1034 aa6.35□□□□□ -1.39
HERPUD1-211ENST00000566550 BHMG1C9JSJ3 638 aaPredicted RBP6.32□□□□□ -1.4
HERPUD1-211ENST00000566550 RGL2O15211 777 aa6.32□□□□□ -1.4
HERPUD1-211ENST00000566550 Q6ZNB5 142 aa6.31□□□□□ -1.4
HERPUD1-211ENST00000566550 SPRYD3Q8NCJ5 442 aa6.31□□□□□ -1.4
HERPUD1-211ENST00000566550 OXER1Q8TDS5 423 aa6.31□□□□□ -1.4
HERPUD1-211ENST00000566550 UPF1Q92900 1129 aaKnown RBP eCLIP6.31□□□□□ -1.4
HERPUD1-211ENST00000566550 RYDENQ9NUL5 291 aaKnown RBP6.31□□□□□ -1.4
HERPUD1-211ENST00000566550 ZBED2Q9BTP6 218 aa6.3□□□□□ -1.4
HERPUD1-211ENST00000566550 FOSBP53539 338 aa6.29□□□□□ -1.4
HERPUD1-211ENST00000566550 HOMEZQ8IX15 550 aa6.29□□□□□ -1.4
HERPUD1-211ENST00000566550 ANKK1Q8NFD2 765 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms