RNA–Protein interactions for RNA: ENST00000566090.5

NUBP2-209, Transcript of nucleotide binding protein 2, human

TSL 2

Gene NUBP2, Length 708 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUBP2-209	ENST00000566090	SUPT6H	Q7KZ85	1726 aa	Known RBP	33.59	■■■□□ 2.97
NUBP2-209	ENST00000566090	AKNA	Q7Z591	1439 aa		33.59	■■■□□ 2.97
NUBP2-209	ENST00000566090	CDC42BPB	Q9Y5S2	1711 aa		33.59	■■■□□ 2.97
NUBP2-209	ENST00000566090	EFCAB2	Q5VUJ9	269 aa		33.57	■■■□□ 2.96
NUBP2-209	ENST00000566090	CCNB3	Q8WWL7	1395 aa		33.53	■■■□□ 2.96
NUBP2-209	ENST00000566090	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.53	■■■□□ 2.96
NUBP2-209	ENST00000566090	ADGRL1	O94910	1474 aa		33.51	■■■□□ 2.96
NUBP2-209	ENST00000566090	NCOA2	Q15596	1464 aa		33.51	■■■□□ 2.96
NUBP2-209	ENST00000566090	ITSN2	Q9NZM3	1697 aa		33.5	■■■□□ 2.95
NUBP2-209	ENST00000566090	KANK4	Q5T7N3	995 aa	Predicted RBP	33.48	■■■□□ 2.95
NUBP2-209	ENST00000566090	DENND4B	O75064	1496 aa	Predicted RBP	33.48	■■■□□ 2.95
NUBP2-209	ENST00000566090	FRMPD1	Q5SYB0	1578 aa		33.44	■■■□□ 2.94
NUBP2-209	ENST00000566090	RICTOR	Q6R327	1708 aa		33.44	■■■□□ 2.94
NUBP2-209	ENST00000566090	SCAPER	Q9BY12	1400 aa		33.44	■■■□□ 2.94
NUBP2-209	ENST00000566090	RAPGEF3	O95398	923 aa		33.41	■■■□□ 2.94
NUBP2-209	ENST00000566090	ABCC1	P33527	1531 aa		33.4	■■■□□ 2.94
NUBP2-209	ENST00000566090	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.4	■■■□□ 2.94
NUBP2-209	ENST00000566090	POGZ	Q7Z3K3	1410 aa		33.38	■■■□□ 2.93
NUBP2-209	ENST00000566090	SAMD9L	Q8IVG5	1584 aa		33.38	■■■□□ 2.93
NUBP2-209	ENST00000566090	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.35	■■■□□ 2.93
NUBP2-209	ENST00000566090	ZMYM4	Q5VZL5	1548 aa		33.33	■■■□□ 2.93
NUBP2-209	ENST00000566090	PLEKHH2	Q8IVE3	1493 aa		33.33	■■■□□ 2.93
NUBP2-209	ENST00000566090	ZNF518A	Q6AHZ1	1483 aa		33.31	■■■□□ 2.92
NUBP2-209	ENST00000566090	ARHGEF12	Q9NZN5	1544 aa		33.28	■■■□□ 2.92
NUBP2-209	ENST00000566090	SYCP2	Q9BX26	1530 aa		33.28	■■■□□ 2.92
NUBP2-209	ENST00000566090	KIAA1107	Q9UPP5	1409 aa		33.27	■■■□□ 2.92
NUBP2-209	ENST00000566090	MYOM3	Q5VTT5	1437 aa		33.26	■■■□□ 2.91
NUBP2-209	ENST00000566090	KDM5C	P41229	1560 aa		33.26	■■■□□ 2.91
NUBP2-209	ENST00000566090	MAGI2	Q86UL8	1455 aa		33.25	■■■□□ 2.91
NUBP2-209	ENST00000566090	KDM4F	A0A1W2PPD8	638 aa		33.24	■■■□□ 2.91
NUBP2-209	ENST00000566090	ARHGEF40	Q8TER5	1519 aa		33.23	■■■□□ 2.91
NUBP2-209	ENST00000566090	TRAPPC8	Q9Y2L5	1435 aa		33.22	■■■□□ 2.91
NUBP2-209	ENST00000566090	ZFYVE16	Q7Z3T8	1539 aa		33.22	■■■□□ 2.91
NUBP2-209	ENST00000566090	MIA2	Q96PC5	1412 aa		33.21	■■■□□ 2.91
NUBP2-209	ENST00000566090	CAMSAP2	Q08AD1	1489 aa		33.21	■■■□□ 2.91
NUBP2-209	ENST00000566090	AFAP1	Q8N556	730 aa		33.2	■■■□□ 2.91
NUBP2-209	ENST00000566090	HECW2	Q9P2P5	1572 aa		33.19	■■■□□ 2.9
NUBP2-209	ENST00000566090	ZNF644	Q9H582	1327 aa	Predicted RBP	33.19	■■■□□ 2.9
NUBP2-209	ENST00000566090	HNRNPM	P52272	730 aa	Known RBP eCLIP	33.17	■■■□□ 2.9	1e-6	■□□□□ 9.5
NUBP2-209	ENST00000566090	MLH3	Q9UHC1	1453 aa		33.14	■■■□□ 2.9
NUBP2-209	ENST00000566090	YEATS2	Q9ULM3	1422 aa		33.13	■■■□□ 2.89
NUBP2-209	ENST00000566090	MBD5	Q9P267	1494 aa		33.12	■■■□□ 2.89
NUBP2-209	ENST00000566090	MYT1L	Q9UL68	1186 aa		33.1	■■■□□ 2.89
NUBP2-209	ENST00000566090	FGD6	Q6ZV73	1430 aa		33.08	■■■□□ 2.89
NUBP2-209	ENST00000566090	ARHGEF5	Q12774	1597 aa		33.08	■■■□□ 2.89
NUBP2-209	ENST00000566090	CCDC141	Q6ZP82	1450 aa		33.07	■■■□□ 2.88
NUBP2-209	ENST00000566090	PTPN23	Q9H3S7	1636 aa		33.07	■■■□□ 2.88
NUBP2-209	ENST00000566090	KIDINS220	Q9ULH0	1771 aa		33.06	■■■□□ 2.88
NUBP2-209	ENST00000566090	SPAG9	O60271	1321 aa	Known RBP	33.05	■■■□□ 2.88
NUBP2-209	ENST00000566090	RSPH4A	Q5TD94	716 aa		33.05	■■■□□ 2.88
NUBP2-209	ENST00000566090	INO80	Q9ULG1	1556 aa	Predicted RBP	33.04	■■■□□ 2.88
NUBP2-209	ENST00000566090	DIP2C	Q9Y2E4	1556 aa		33.04	■■■□□ 2.88
NUBP2-209	ENST00000566090	ABCA6	Q8N139	1617 aa		33.04	■■■□□ 2.88
NUBP2-209	ENST00000566090	ATP10A	O60312	1499 aa		33.04	■■■□□ 2.88
NUBP2-209	ENST00000566090	ATP7A	Q04656	1500 aa		33.03	■■■□□ 2.88
NUBP2-209	ENST00000566090	C9orf84	Q5VXU9	1444 aa		33.02	■■■□□ 2.88
NUBP2-209	ENST00000566090	TCOF1	Q13428	1488 aa	Known RBP	33.01	■■■□□ 2.88
NUBP2-209	ENST00000566090	PPARGC1B	Q86YN6	1023 aa	Known RBP	33	■■■□□ 2.87
NUBP2-209	ENST00000566090	RERE	Q9P2R6	1566 aa		32.97	■■■□□ 2.87
NUBP2-209	ENST00000566090	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.96	■■■□□ 2.87
NUBP2-209	ENST00000566090	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.95	■■■□□ 2.86
NUBP2-209	ENST00000566090	SIGLEC1	Q9BZZ2	1709 aa		32.93	■■■□□ 2.86
NUBP2-209	ENST00000566090	TSPY4	P0CV99	314 aa		32.91	■■■□□ 2.86
NUBP2-209	ENST00000566090	TSPY10	P0CW01	314 aa		32.91	■■■□□ 2.86
NUBP2-209	ENST00000566090	MAST1	Q9Y2H9	1570 aa		32.91	■■■□□ 2.86
NUBP2-209	ENST00000566090	BCORL1	Q5H9F3	1711 aa		32.89	■■■□□ 2.86
NUBP2-209	ENST00000566090	ADGB	Q8N7X0	1667 aa		32.89	■■■□□ 2.86
NUBP2-209	ENST00000566090	DNMT1	P26358	1616 aa	Known RBP	32.89	■■■□□ 2.86
NUBP2-209	ENST00000566090	CROCC2	H7BZ55	1655 aa		32.88	■■■□□ 2.85
NUBP2-209	ENST00000566090	SHANK2	Q9UPX8	1470 aa		32.85	■■■□□ 2.85
NUBP2-209	ENST00000566090	AGL	P35573	1532 aa		32.84	■■■□□ 2.85
NUBP2-209	ENST00000566090	FAM50A	Q14320	339 aa	Known RBP	32.84	■■■□□ 2.85
NUBP2-209	ENST00000566090	ABCC5	O15440	1437 aa		32.84	■■■□□ 2.85
NUBP2-209	ENST00000566090	DAPK1	P53355	1430 aa		32.84	■■■□□ 2.85
NUBP2-209	ENST00000566090	A2M	P01023	1474 aa		32.83	■■■□□ 2.85
NUBP2-209	ENST00000566090	ADAMTSL3	P82987	1691 aa		32.82	■■■□□ 2.84
NUBP2-209	ENST00000566090	PLXNC1	O60486	1568 aa		32.81	■■■□□ 2.84
NUBP2-209	ENST00000566090	MADD	Q8WXG6	1647 aa		32.74	■■■□□ 2.83
NUBP2-209	ENST00000566090	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.73	■■■□□ 2.83	1e-8	■■■■■ 36.3
NUBP2-209	ENST00000566090	MLEC	Q14165	292 aa		32.73	■■■□□ 2.83
NUBP2-209	ENST00000566090	DHX29	Q7Z478	1369 aa	Known RBP	32.72	■■■□□ 2.83
NUBP2-209	ENST00000566090	RRBP1	Q9P2E9	1410 aa	Known RBP	32.72	■■■□□ 2.83
NUBP2-209	ENST00000566090	FER1L4	A9Z1Z3	1794 aa		32.69	■■■□□ 2.82
NUBP2-209	ENST00000566090	RIMS1	Q86UR5	1692 aa	Known RBP	32.66	■■■□□ 2.82
NUBP2-209	ENST00000566090	ANKRD30A	Q9BXX3	1397 aa		32.65	■■■□□ 2.82
NUBP2-209	ENST00000566090	DUOX2	Q9NRD8	1548 aa		32.65	■■■□□ 2.82
NUBP2-209	ENST00000566090	ADGRL2	O95490	1459 aa		32.64	■■■□□ 2.82
NUBP2-209	ENST00000566090	KIF15	Q9NS87	1388 aa		32.63	■■■□□ 2.81
NUBP2-209	ENST00000566090	CHIC2	Q9UKJ5	165 aa		32.62	■■■□□ 2.81
NUBP2-209	ENST00000566090	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.61	■■■□□ 2.81
NUBP2-209	ENST00000566090	PTPRM	P28827	1452 aa		32.61	■■■□□ 2.81
NUBP2-209	ENST00000566090	NCOA1	Q15788	1441 aa		32.59	■■■□□ 2.81
NUBP2-209	ENST00000566090	RRP7BP	Q9NSQ0	103 aa		32.58	■■■□□ 2.81
NUBP2-209	ENST00000566090	PTPRK	Q15262	1439 aa		32.57	■■■□□ 2.8
NUBP2-209	ENST00000566090	KIF3B	O15066	747 aa		32.56	■■■□□ 2.8
NUBP2-209	ENST00000566090	ERBIN	Q96RT1	1412 aa		32.55	■■■□□ 2.8
NUBP2-209	ENST00000566090	ESF1	Q9H501	851 aa	Known RBP	32.55	■■■□□ 2.8
NUBP2-209	ENST00000566090	GGT6	Q6P531	493 aa		32.54	■■■□□ 2.8
NUBP2-209	ENST00000566090	ITGAE	P38570	1179 aa		32.53	■■■□□ 2.8
NUBP2-209	ENST00000566090	CNTLN	Q9NXG0	1405 aa		32.52	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms