RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 TIE1P35590 1138 aa11.16□□□□□ -0.62
UBFD1-204ENST00000565634 POTEFA5A3E0 1075 aa11.15□□□□□ -0.62
UBFD1-204ENST00000565634 HECW2Q9P2P5 1572 aa11.15□□□□□ -0.62
UBFD1-204ENST00000565634 FBXO3Q9UK99 471 aa11.14□□□□□ -0.63
UBFD1-204ENST00000565634 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
UBFD1-204ENST00000565634 SGIP1Q9BQI5 828 aa11.13□□□□□ -0.63
UBFD1-204ENST00000565634 PCDHB13Q9Y5F0 798 aa11.13□□□□□ -0.63
UBFD1-204ENST00000565634 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
UBFD1-204ENST00000565634 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
UBFD1-204ENST00000565634 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
UBFD1-204ENST00000565634 CUX1P39880 1505 aa11.1□□□□□ -0.63
UBFD1-204ENST00000565634 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
UBFD1-204ENST00000565634 ABCC10Q5T3U5 1492 aa11.1□□□□□ -0.63
UBFD1-204ENST00000565634 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
UBFD1-204ENST00000565634 TTBK1Q5TCY1 1321 aaPredicted RBP11.09□□□□□ -0.63
UBFD1-204ENST00000565634 COLQQ9Y215 455 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-204ENST00000565634 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-204ENST00000565634 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
UBFD1-204ENST00000565634 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
UBFD1-204ENST00000565634 ILDR2Q71H61 639 aa11.06□□□□□ -0.64
UBFD1-204ENST00000565634 GRIN2AQ12879 1464 aa11.06□□□□□ -0.64
UBFD1-204ENST00000565634 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
UBFD1-204ENST00000565634 JPH4Q96JJ6 628 aa11.05□□□□□ -0.64
UBFD1-204ENST00000565634 SUPT5HO00267 1087 aaKnown RBP11.04□□□□□ -0.64
UBFD1-204ENST00000565634 TRIM35Q9UPQ4 493 aa11.04□□□□□ -0.64
UBFD1-204ENST00000565634 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
UBFD1-204ENST00000565634 PYGBP11216 843 aa11.03□□□□□ -0.64
UBFD1-204ENST00000565634 MAMSTRQ6ZN01 415 aa11.02□□□□□ -0.65
UBFD1-204ENST00000565634 LMTK3Q96Q04 1460 aa11.01□□□□□ -0.65
UBFD1-204ENST00000565634 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
UBFD1-204ENST00000565634 NUP160Q12769 1436 aa11.01□□□□□ -0.65
UBFD1-204ENST00000565634 ABCA5Q8WWZ7 1642 aa11□□□□□ -0.65
UBFD1-204ENST00000565634 ADCY10Q96PN6 1610 aa11□□□□□ -0.65
UBFD1-204ENST00000565634 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
UBFD1-204ENST00000565634 RTN4Q9NQC3 1192 aaKnown RBP10.99□□□□□ -0.65
UBFD1-204ENST00000565634 SEC24BO95487 1268 aa10.98□□□□□ -0.65
UBFD1-204ENST00000565634 IER5LQ5T953 404 aa10.98□□□□□ -0.65
UBFD1-204ENST00000565634 COL17A1Q9UMD9 1497 aaPredicted RBP10.97□□□□□ -0.65
UBFD1-204ENST00000565634 ADAMTS12P58397 1594 aa10.96□□□□□ -0.65
UBFD1-204ENST00000565634 MAPKBP1O60336 1514 aa10.96□□□□□ -0.65
UBFD1-204ENST00000565634 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
UBFD1-204ENST00000565634 SCUBE2Q9NQ36 999 aa10.96□□□□□ -0.65
UBFD1-204ENST00000565634 PCDHB8Q9UN66 801 aa10.96□□□□□ -0.65
UBFD1-204ENST00000565634 PPRC1Q5VV67 1664 aaKnown RBP10.95□□□□□ -0.66
UBFD1-204ENST00000565634 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
UBFD1-204ENST00000565634 SOCS7O14512 581 aa10.93□□□□□ -0.66
UBFD1-204ENST00000565634 POTEMA6NI47 508 aa10.92□□□□□ -0.66
UBFD1-204ENST00000565634 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
UBFD1-204ENST00000565634 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
UBFD1-204ENST00000565634 DISP3Q9P2K9 1392 aa10.9□□□□□ -0.66
UBFD1-204ENST00000565634 GSE1Q14687 1217 aa10.9□□□□□ -0.66
UBFD1-204ENST00000565634 POTEGQ6S5H5 508 aa10.9□□□□□ -0.66
UBFD1-204ENST00000565634 IFNLR1Q8IU57 520 aaPredicted RBP10.9□□□□□ -0.66
UBFD1-204ENST00000565634 IRX5P78411 483 aaPredicted RBP10.89□□□□□ -0.67
UBFD1-204ENST00000565634 CHRM1P11229 460 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-204ENST00000565634 FAM163AQ96GL9 167 aaPredicted RBP10.87□□□□□ -0.67
UBFD1-204ENST00000565634 PLCG2P16885 1265 aa10.85□□□□□ -0.67
UBFD1-204ENST00000565634 CUL7Q14999 1698 aa10.84□□□□□ -0.67
UBFD1-204ENST00000565634 ASXL2Q76L83 1435 aa10.84□□□□□ -0.67
UBFD1-204ENST00000565634 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
UBFD1-204ENST00000565634 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
UBFD1-204ENST00000565634 SPOCK2Q92563 424 aa10.82□□□□□ -0.68
UBFD1-204ENST00000565634 OCEL1Q9H607 264 aa10.82□□□□□ -0.68
UBFD1-204ENST00000565634 RUSC2Q8N2Y8 1516 aa10.81□□□□□ -0.68
UBFD1-204ENST00000565634 HSPA2P54652 639 aa10.81□□□□□ -0.68
UBFD1-204ENST00000565634 AMER1Q5JTC6 1135 aaPredicted RBP10.81□□□□□ -0.68
UBFD1-204ENST00000565634 WRNQ14191 1432 aaPredicted RBP eCLIP10.81□□□□□ -0.68
UBFD1-204ENST00000565634 PTPRGP23470 1445 aa10.8□□□□□ -0.68
UBFD1-204ENST00000565634 KIF21BO75037 1637 aa10.8□□□□□ -0.68
UBFD1-204ENST00000565634 TOP2BQ02880 1626 aa10.78□□□□□ -0.68
UBFD1-204ENST00000565634 SLAIN1Q8ND83 568 aa10.77□□□□□ -0.69
UBFD1-204ENST00000565634 CERKQ8TCT0 537 aa10.77□□□□□ -0.69
UBFD1-204ENST00000565634 ERICH3Q5RHP9 1530 aa10.77□□□□□ -0.69
UBFD1-204ENST00000565634 GLI2P10070 1586 aa10.77□□□□□ -0.69
UBFD1-204ENST00000565634 PSEN1P49768 467 aa10.76□□□□□ -0.69
UBFD1-204ENST00000565634 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
UBFD1-204ENST00000565634 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
UBFD1-204ENST00000565634 ABCC2Q92887 1545 aa10.75□□□□□ -0.69
UBFD1-204ENST00000565634 MAP3K4Q9Y6R4 1608 aa10.75□□□□□ -0.69
UBFD1-204ENST00000565634 PDCD7Q8N8D1 485 aaKnown RBP10.74□□□□□ -0.69
UBFD1-204ENST00000565634 PLB1Q6P1J6 1458 aa10.74□□□□□ -0.69
UBFD1-204ENST00000565634 EPRSP07814 1512 aaKnown RBP10.74□□□□□ -0.69
UBFD1-204ENST00000565634 PTPRMP28827 1452 aa10.71□□□□□ -0.69
UBFD1-204ENST00000565634 BIVM-ERCC5R4GMW8 1640 aa10.7□□□□□ -0.7
UBFD1-204ENST00000565634 KIAA0586Q9BVV6 1533 aa10.7□□□□□ -0.7
UBFD1-204ENST00000565634 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
UBFD1-204ENST00000565634 PDAP1Q13442 181 aaKnown RBP10.7□□□□□ -0.7
UBFD1-204ENST00000565634 PCDH10Q9P2E7 1040 aa10.7□□□□□ -0.7
UBFD1-204ENST00000565634 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
UBFD1-204ENST00000565634 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
UBFD1-204ENST00000565634 ARID4BQ4LE39 1312 aaPredicted RBP10.68□□□□□ -0.7
UBFD1-204ENST00000565634 ST18O60284 1047 aa10.68□□□□□ -0.7
UBFD1-204ENST00000565634 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
UBFD1-204ENST00000565634 ZCCHC11Q5TAX3 1644 aaKnown RBP10.67□□□□□ -0.7
UBFD1-204ENST00000565634 ADAMTSL3P82987 1691 aa10.66□□□□□ -0.7
UBFD1-204ENST00000565634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.66□□□□□ -0.76e-7■□□□□ 8.1
UBFD1-204ENST00000565634 UACAQ9BZF9 1416 aa10.66□□□□□ -0.7
UBFD1-204ENST00000565634 PCF11O94913 1555 aaKnown RBP10.65□□□□□ -0.7
UBFD1-204ENST00000565634 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
UBFD1-204ENST00000565634 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms