RNA–Protein interactions for RNA: ENST00000565401.1

AC009041.1-201, humanhuman

TSL 4 BASIC

Gene AC009041.1, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.1-201ENST00000565401 ZMYM4Q5VZL5 1548 aa22.65■■□□□ 1.22
AC009041.1-201ENST00000565401 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
AC009041.1-201ENST00000565401 ZNF335Q9H4Z2 1342 aaPredicted RBP22.6■■□□□ 1.21
AC009041.1-201ENST00000565401 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
AC009041.1-201ENST00000565401 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
AC009041.1-201ENST00000565401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
AC009041.1-201ENST00000565401 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
AC009041.1-201ENST00000565401 NCOA1Q15788 1441 aa22.58■■□□□ 1.21
AC009041.1-201ENST00000565401 HECW1Q76N89 1606 aa22.55■■□□□ 1.2
AC009041.1-201ENST00000565401 PIP4K2BP78356 416 aa22.54■■□□□ 1.2
AC009041.1-201ENST00000565401 ATP10AO60312 1499 aa22.54■■□□□ 1.2
AC009041.1-201ENST00000565401 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
AC009041.1-201ENST00000565401 CTTNBP2Q8WZ74 1663 aa22.51■■□□□ 1.19
AC009041.1-201ENST00000565401 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
AC009041.1-201ENST00000565401 P3H3Q8IVL6 736 aa22.49■■□□□ 1.19
AC009041.1-201ENST00000565401 NCKAP5LQ9HCH0 1330 aa22.46■■□□□ 1.19
AC009041.1-201ENST00000565401 TRAPPC8Q9Y2L5 1435 aa22.45■■□□□ 1.18
AC009041.1-201ENST00000565401 CAMSAP1Q5T5Y3 1602 aa22.42■■□□□ 1.18
AC009041.1-201ENST00000565401 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
AC009041.1-201ENST00000565401 TOM1O60784 492 aa22.42■■□□□ 1.18
AC009041.1-201ENST00000565401 C3P01024 1663 aa22.42■■□□□ 1.18
AC009041.1-201ENST00000565401 PLEKHD1A6NEE1 506 aa22.39■■□□□ 1.17
AC009041.1-201ENST00000565401 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
AC009041.1-201ENST00000565401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
AC009041.1-201ENST00000565401 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
AC009041.1-201ENST00000565401 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
AC009041.1-201ENST00000565401 NUP153P49790 1475 aaKnown RBP22.32■■□□□ 1.16
AC009041.1-201ENST00000565401 PKD2Q13563 968 aa22.31■■□□□ 1.16
AC009041.1-201ENST00000565401 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
AC009041.1-201ENST00000565401 PPP6R1Q9UPN7 881 aa22.28■■□□□ 1.16
AC009041.1-201ENST00000565401 MYT1LQ9UL68 1186 aa22.27■■□□□ 1.16
AC009041.1-201ENST00000565401 PLCH2O75038 1416 aa22.23■■□□□ 1.15
AC009041.1-201ENST00000565401 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
AC009041.1-201ENST00000565401 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
AC009041.1-201ENST00000565401 NPATQ14207 1427 aa22.21■■□□□ 1.15
AC009041.1-201ENST00000565401 AFAP1Q8N556 730 aa22.2■■□□□ 1.14
AC009041.1-201ENST00000565401 CNTLNQ9NXG0 1405 aa22.2■■□□□ 1.14
AC009041.1-201ENST00000565401 DIP2CQ9Y2E4 1556 aa22.18■■□□□ 1.14
AC009041.1-201ENST00000565401 AGLP35573 1532 aa22.18■■□□□ 1.14
AC009041.1-201ENST00000565401 ZNF518AQ6AHZ1 1483 aa22.18■■□□□ 1.14
AC009041.1-201ENST00000565401 EFCAB2Q5VUJ9 269 aa22.18■■□□□ 1.14
AC009041.1-201ENST00000565401 CPS1P31327 1500 aa22.17■■□□□ 1.14
AC009041.1-201ENST00000565401 PTPRKQ15262 1439 aa22.17■■□□□ 1.14
AC009041.1-201ENST00000565401 POTEAQ6S8J7 498 aa22.17■■□□□ 1.14
AC009041.1-201ENST00000565401 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
AC009041.1-201ENST00000565401 SAMD9Q5K651 1589 aa22.14■■□□□ 1.13
AC009041.1-201ENST00000565401 ALKQ9UM73 1620 aa22.13■■□□□ 1.13
AC009041.1-201ENST00000565401 KDM5CP41229 1560 aa22.12■■□□□ 1.13
AC009041.1-201ENST00000565401 SHANK2Q9UPX8 1470 aa22.12■■□□□ 1.13
AC009041.1-201ENST00000565401 ZMYM3Q14202 1370 aa22.11■■□□□ 1.13
AC009041.1-201ENST00000565401 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
AC009041.1-201ENST00000565401 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
AC009041.1-201ENST00000565401 ABCA6Q8N139 1617 aa22.09■■□□□ 1.13
AC009041.1-201ENST00000565401 ZNF142P52746 1687 aaPredicted RBP22.08■■□□□ 1.13
AC009041.1-201ENST00000565401 CEP170BQ9Y4F5 1589 aaPredicted RBP22.08■■□□□ 1.12
AC009041.1-201ENST00000565401 SRCAPQ6ZRS2 3230 aa22.06■■□□□ 1.12
AC009041.1-201ENST00000565401 MYO3AQ8NEV4 1616 aa22.06■■□□□ 1.12
AC009041.1-201ENST00000565401 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
AC009041.1-201ENST00000565401 MLH3Q9UHC1 1453 aa22.03■■□□□ 1.12
AC009041.1-201ENST00000565401 SETD1AO15047 1707 aaKnown RBP22.03■■□□□ 1.12
AC009041.1-201ENST00000565401 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
AC009041.1-201ENST00000565401 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
AC009041.1-201ENST00000565401 CDK13Q14004 1512 aaKnown RBP21.97■■□□□ 1.11
AC009041.1-201ENST00000565401 UPF1Q92900 1129 aaKnown RBP eCLIP21.96■■□□□ 1.11
AC009041.1-201ENST00000565401 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
AC009041.1-201ENST00000565401 VWDEQ8N2E2 1590 aa21.94■■□□□ 1.1
AC009041.1-201ENST00000565401 NEURL4Q96JN8 1562 aa21.94■■□□□ 1.1
AC009041.1-201ENST00000565401 A2ML1A8K2U0 1454 aa21.91■■□□□ 1.1
AC009041.1-201ENST00000565401 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
AC009041.1-201ENST00000565401 POLR1AO95602 1720 aaPredicted RBP21.9■■□□□ 1.1
AC009041.1-201ENST00000565401 CLTCQ00610 1675 aaKnown RBP21.89■■□□□ 1.1
AC009041.1-201ENST00000565401 RNF17Q9BXT8 1623 aaKnown RBP21.86■■□□□ 1.09
AC009041.1-201ENST00000565401 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
AC009041.1-201ENST00000565401 LRRC7Q96NW7 1537 aa21.85■■□□□ 1.09
AC009041.1-201ENST00000565401 ANKLE2Q86XL3 938 aa21.85■■□□□ 1.09
AC009041.1-201ENST00000565401 KIF14Q15058 1648 aa21.84■■□□□ 1.09
AC009041.1-201ENST00000565401 CDK11AQ9UQ88 783 aaPredicted RBP21.8■■□□□ 1.08
AC009041.1-201ENST00000565401 NPHP4O75161 1426 aaPredicted RBP21.8■■□□□ 1.08
AC009041.1-201ENST00000565401 GGT6Q6P531 493 aa21.79■■□□□ 1.08
AC009041.1-201ENST00000565401 ATP1B4Q9UN42 357 aaPredicted RBP21.79■■□□□ 1.08
AC009041.1-201ENST00000565401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.78■■□□□ 1.08
AC009041.1-201ENST00000565401 ABCC1P33527 1531 aa21.78■■□□□ 1.08
AC009041.1-201ENST00000565401 STRCP1A6NGW2 1772 aa21.76■■□□□ 1.07
AC009041.1-201ENST00000565401 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
AC009041.1-201ENST00000565401 TRIM52Q96A61 297 aa21.74■■□□□ 1.07
AC009041.1-201ENST00000565401 MED14O60244 1454 aa21.74■■□□□ 1.07
AC009041.1-201ENST00000565401 CDC42BPBQ9Y5S2 1711 aa21.74■■□□□ 1.07
AC009041.1-201ENST00000565401 SYNMO15061 1565 aa21.74■■□□□ 1.07
AC009041.1-201ENST00000565401 THEMISQ8N1K5 641 aaPredicted RBP21.72■■□□□ 1.07
AC009041.1-201ENST00000565401 TNRQ92752 1358 aa21.72■■□□□ 1.07
AC009041.1-201ENST00000565401 TROQ12816 1431 aaPredicted RBP21.72■■□□□ 1.07
AC009041.1-201ENST00000565401 FAM135BQ49AJ0 1406 aa21.71■■□□□ 1.07
AC009041.1-201ENST00000565401 FBXO31Q5XUX0 539 aaPredicted RBP21.7■■□□□ 1.06
AC009041.1-201ENST00000565401 SPAG9O60271 1321 aaKnown RBP21.69■■□□□ 1.06
AC009041.1-201ENST00000565401 CLIP1P30622 1438 aa21.69■■□□□ 1.06
AC009041.1-201ENST00000565401 SAMD9LQ8IVG5 1584 aa21.68■■□□□ 1.06
AC009041.1-201ENST00000565401 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
AC009041.1-201ENST00000565401 DEPDC5O75140 1603 aa21.67■■□□□ 1.06
AC009041.1-201ENST00000565401 A2MP01023 1474 aa21.64■■□□□ 1.06
AC009041.1-201ENST00000565401 PLXNC1O60486 1568 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms