RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
THUMPD1-203ENST00000565248 FANCAO15360 1455 aa25.39■■□□□ 1.65
THUMPD1-203ENST00000565248 PLPPR3Q6T4P5 718 aa25.37■■□□□ 1.65
THUMPD1-203ENST00000565248 MAP3K1Q13233 1512 aa25.36■■□□□ 1.65
THUMPD1-203ENST00000565248 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
THUMPD1-203ENST00000565248 HSPA2P54652 639 aa25.34■■□□□ 1.65
THUMPD1-203ENST00000565248 ZMYM4Q5VZL5 1548 aa25.32■■□□□ 1.64
THUMPD1-203ENST00000565248 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
THUMPD1-203ENST00000565248 MAGI2Q86UL8 1455 aa25.31■■□□□ 1.64
THUMPD1-203ENST00000565248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.31■■□□□ 1.645e-6■■■■□ 19.7
THUMPD1-203ENST00000565248 CCDC18Q5T9S5 1454 aa25.3■■□□□ 1.64
THUMPD1-203ENST00000565248 TIAM1Q13009 1591 aa25.29■■□□□ 1.64
THUMPD1-203ENST00000565248 CERKQ8TCT0 537 aa25.27■■□□□ 1.64
THUMPD1-203ENST00000565248 MLECQ14165 292 aa25.26■■□□□ 1.63
THUMPD1-203ENST00000565248 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
THUMPD1-203ENST00000565248 YEATS2Q9ULM3 1422 aa25.25■■□□□ 1.63
THUMPD1-203ENST00000565248 TTC37Q6PGP7 1564 aa25.25■■□□□ 1.63
THUMPD1-203ENST00000565248 FER1L4A9Z1Z3 1794 aa25.25■■□□□ 1.63
THUMPD1-203ENST00000565248 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
THUMPD1-203ENST00000565248 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.62
THUMPD1-203ENST00000565248 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
THUMPD1-203ENST00000565248 PLCH2O75038 1416 aa25.17■■□□□ 1.62
THUMPD1-203ENST00000565248 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
THUMPD1-203ENST00000565248 ATP10AO60312 1499 aa25.15■■□□□ 1.62
THUMPD1-203ENST00000565248 CDK11AQ9UQ88 783 aaPredicted RBP25.15■■□□□ 1.62
THUMPD1-203ENST00000565248 MTUS2Q5JR59 1369 aa25.15■■□□□ 1.62
THUMPD1-203ENST00000565248 PREX1Q8TCU6 1659 aa25.14■■□□□ 1.62
THUMPD1-203ENST00000565248 DMRT2Q9Y5R5 561 aa25.14■■□□□ 1.62
THUMPD1-203ENST00000565248 C9orf84Q5VXU9 1444 aa25.13■■□□□ 1.61
THUMPD1-203ENST00000565248 LRRIQ1Q96JM4 1722 aa25.13■■□□□ 1.61
THUMPD1-203ENST00000565248 TRIM26Q12899 539 aaPredicted RBP25.13■■□□□ 1.61
THUMPD1-203ENST00000565248 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
THUMPD1-203ENST00000565248 CDK13Q14004 1512 aaKnown RBP25.12■■□□□ 1.61
THUMPD1-203ENST00000565248 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
THUMPD1-203ENST00000565248 EHBP1L1Q8N3D4 1523 aa25.1■■□□□ 1.61
THUMPD1-203ENST00000565248 MYO5CQ9NQX4 1742 aa25.09■■□□□ 1.61
THUMPD1-203ENST00000565248 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
THUMPD1-203ENST00000565248 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
THUMPD1-203ENST00000565248 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
THUMPD1-203ENST00000565248 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
THUMPD1-203ENST00000565248 UHRF1BP1Q6BDS2 1440 aa25.03■■□□□ 1.6
THUMPD1-203ENST00000565248 DISP3Q9P2K9 1392 aa25.02■■□□□ 1.6
THUMPD1-203ENST00000565248 KIF14Q15058 1648 aa24.99■■□□□ 1.59
THUMPD1-203ENST00000565248 SUPT6HQ7KZ85 1726 aaKnown RBP24.99■■□□□ 1.59
THUMPD1-203ENST00000565248 STRCQ7RTU9 1775 aa24.99■■□□□ 1.59
THUMPD1-203ENST00000565248 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
THUMPD1-203ENST00000565248 TROQ12816 1431 aaPredicted RBP24.98■■□□□ 1.59
THUMPD1-203ENST00000565248 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
THUMPD1-203ENST00000565248 AFAP1Q8N556 730 aa24.96■■□□□ 1.59
THUMPD1-203ENST00000565248 KDM5CP41229 1560 aa24.95■■□□□ 1.58
THUMPD1-203ENST00000565248 PCGF6Q9BYE7 350 aa24.94■■□□□ 1.58
THUMPD1-203ENST00000565248 NCOA2Q15596 1464 aa24.94■■□□□ 1.58
THUMPD1-203ENST00000565248 SOCS7O14512 581 aa24.91■■□□□ 1.58
THUMPD1-203ENST00000565248 PTPRTO14522 1441 aa24.91■■□□□ 1.58
THUMPD1-203ENST00000565248 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
THUMPD1-203ENST00000565248 DIP2CQ9Y2E4 1556 aa24.89■■□□□ 1.58
THUMPD1-203ENST00000565248 ILDR2Q71H61 639 aa24.88■■□□□ 1.57
THUMPD1-203ENST00000565248 C3P01024 1663 aa24.88■■□□□ 1.57
THUMPD1-203ENST00000565248 MLH3Q9UHC1 1453 aa24.87■■□□□ 1.57
THUMPD1-203ENST00000565248 RRBP1Q9P2E9 1410 aaKnown RBP24.86■■□□□ 1.57
THUMPD1-203ENST00000565248 TRAPPC8Q9Y2L5 1435 aa24.85■■□□□ 1.57
THUMPD1-203ENST00000565248 MYOM3Q5VTT5 1437 aa24.84■■□□□ 1.57
THUMPD1-203ENST00000565248 ABCA6Q8N139 1617 aa24.83■■□□□ 1.57
THUMPD1-203ENST00000565248 CCNB3Q8WWL7 1395 aa24.83■■□□□ 1.57
THUMPD1-203ENST00000565248 AGLP35573 1532 aa24.83■■□□□ 1.57
THUMPD1-203ENST00000565248 CDC42BPBQ9Y5S2 1711 aa24.83■■□□□ 1.57
THUMPD1-203ENST00000565248 CNTLNQ9NXG0 1405 aa24.81■■□□□ 1.56
THUMPD1-203ENST00000565248 SPATA31D1Q6ZQQ2 1576 aa24.8■■□□□ 1.56
THUMPD1-203ENST00000565248 FGD6Q6ZV73 1430 aa24.79■■□□□ 1.56
THUMPD1-203ENST00000565248 IQSEC2Q5JU85 1478 aa24.79■■□□□ 1.56
THUMPD1-203ENST00000565248 PREX2Q70Z35 1606 aa24.78■■□□□ 1.56
THUMPD1-203ENST00000565248 ABCC1P33527 1531 aa24.76■■□□□ 1.55
THUMPD1-203ENST00000565248 MIA2Q96PC5 1412 aa24.76■■□□□ 1.55
THUMPD1-203ENST00000565248 ITSN2Q9NZM3 1697 aa24.75■■□□□ 1.55
THUMPD1-203ENST00000565248 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
THUMPD1-203ENST00000565248 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
THUMPD1-203ENST00000565248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.74■■□□□ 1.55
THUMPD1-203ENST00000565248 FAM50AQ14320 339 aaKnown RBP24.73■■□□□ 1.55
THUMPD1-203ENST00000565248 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
THUMPD1-203ENST00000565248 NPATQ14207 1427 aa24.7■■□□□ 1.55
THUMPD1-203ENST00000565248 MROH2AA6NES4 1674 aa24.69■■□□□ 1.54
THUMPD1-203ENST00000565248 GPATCH8Q9UKJ3 1502 aaKnown RBP24.69■■□□□ 1.54
THUMPD1-203ENST00000565248 CAMSAP1Q5T5Y3 1602 aa24.68■■□□□ 1.54
THUMPD1-203ENST00000565248 CFDP1Q9UEE9 299 aaPredicted RBP24.68■■□□□ 1.54
THUMPD1-203ENST00000565248 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
THUMPD1-203ENST00000565248 CDC42BPAQ5VT25 1732 aa24.66■■□□□ 1.54
THUMPD1-203ENST00000565248 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
THUMPD1-203ENST00000565248 ZMYM3Q14202 1370 aa24.66■■□□□ 1.54
THUMPD1-203ENST00000565248 ZNF777Q9ULD5 760 aaPredicted RBP24.65■■□□□ 1.54
THUMPD1-203ENST00000565248 SPAG9O60271 1321 aaKnown RBP24.63■■□□□ 1.53
THUMPD1-203ENST00000565248 SAMD9LQ8IVG5 1584 aa24.63■■□□□ 1.53
THUMPD1-203ENST00000565248 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
THUMPD1-203ENST00000565248 PKD2Q13563 968 aa24.61■■□□□ 1.53
THUMPD1-203ENST00000565248 NCKAP5LQ9HCH0 1330 aa24.61■■□□□ 1.53
THUMPD1-203ENST00000565248 ZNF335Q9H4Z2 1342 aaPredicted RBP24.58■■□□□ 1.52
THUMPD1-203ENST00000565248 ITGAEP38570 1179 aa24.57■■□□□ 1.52
THUMPD1-203ENST00000565248 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
THUMPD1-203ENST00000565248 SYCP2Q9BX26 1530 aa24.56■■□□□ 1.52
THUMPD1-203ENST00000565248 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
THUMPD1-203ENST00000565248 CAMSAP2Q08AD1 1489 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms