RNA–Protein interactions for RNA: ENST00000564999.5

TCF4-225, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TCF4, Length 3,590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-225ENST00000564999 EFCAB5A4FU69 1503 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 KCNV2Q8TDN2 545 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 VPS8Q8N3P4 1428 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 NESP48681 1621 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
TCF4-225ENST00000564999 PUS7Q96PZ0 661 aaKnown RBP10.48□□□□□ -0.73
TCF4-225ENST00000564999 AQRO60306 1485 aaKnown RBP eCLIP10.48□□□□□ -0.73
TCF4-225ENST00000564999 ARHGEF11O15085 1522 aa10.47□□□□□ -0.73
TCF4-225ENST00000564999 CLIP1P30622 1438 aa10.46□□□□□ -0.73
TCF4-225ENST00000564999 SNAPC4Q5SXM2 1469 aa10.45□□□□□ -0.74
TCF4-225ENST00000564999 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
TCF4-225ENST00000564999 IGF1RP08069 1367 aa10.45□□□□□ -0.74
TCF4-225ENST00000564999 MFAP1P55081 439 aaKnown RBP10.44□□□□□ -0.74
TCF4-225ENST00000564999 KIF27Q86VH2 1401 aa10.44□□□□□ -0.74
TCF4-225ENST00000564999 SPOCK2Q92563 424 aa10.44□□□□□ -0.74
TCF4-225ENST00000564999 GZF1Q9H116 711 aaPredicted RBP10.43□□□□□ -0.74
TCF4-225ENST00000564999 PCF11O94913 1555 aaKnown RBP10.43□□□□□ -0.74
TCF4-225ENST00000564999 ZNF692Q9BU19 519 aaPredicted RBP10.43□□□□□ -0.74
TCF4-225ENST00000564999 HMGB1P09429 215 aaKnown RBP10.42□□□□□ -0.74
TCF4-225ENST00000564999 TMCO4Q5TGY1 634 aa10.41□□□□□ -0.74
TCF4-225ENST00000564999 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
TCF4-225ENST00000564999 CIZ1Q9ULV3 898 aaPredicted RBP10.4□□□□□ -0.74
TCF4-225ENST00000564999 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.74
TCF4-225ENST00000564999 GTPBP6O43824 516 aaPredicted RBP10.4□□□□□ -0.75
TCF4-225ENST00000564999 FAM177A1Q8N128 213 aaPredicted RBP10.39□□□□□ -0.75
TCF4-225ENST00000564999 CWC22Q9HCG8 908 aaKnown RBP10.39□□□□□ -0.75
TCF4-225ENST00000564999 BCL11AQ9H165 835 aa10.39□□□□□ -0.75
TCF4-225ENST00000564999 PROM2Q8N271 834 aa10.38□□□□□ -0.75
TCF4-225ENST00000564999 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
TCF4-225ENST00000564999 EIF4G3O43432 1585 aaKnown RBP10.38□□□□□ -0.75
TCF4-225ENST00000564999 RNF25Q96BH1 459 aaPredicted RBP10.38□□□□□ -0.75
TCF4-225ENST00000564999 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
TCF4-225ENST00000564999 MKRN4PQ13434 485 aaPredicted RBP10.36□□□□□ -0.75
TCF4-225ENST00000564999 WDR70Q9NW82 654 aa10.36□□□□□ -0.75
TCF4-225ENST00000564999 UGGT2Q9NYU1 1516 aa10.35□□□□□ -0.75
TCF4-225ENST00000564999 MRC2Q9UBG0 1479 aa10.35□□□□□ -0.75
TCF4-225ENST00000564999 BRPF3Q9ULD4 1205 aa10.35□□□□□ -0.75
TCF4-225ENST00000564999 SCAF1Q9H7N4 1312 aaKnown RBP10.34□□□□□ -0.75
TCF4-225ENST00000564999 GRIN2BQ13224 1484 aa10.34□□□□□ -0.75
TCF4-225ENST00000564999 PPM1GO15355 546 aaPredicted RBP10.34□□□□□ -0.75
TCF4-225ENST00000564999 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
TCF4-225ENST00000564999 FYCO1Q9BQS8 1478 aa10.34□□□□□ -0.75
TCF4-225ENST00000564999 RAD54L2Q9Y4B4 1467 aa10.34□□□□□ -0.75
TCF4-225ENST00000564999 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
TCF4-225ENST00000564999 GCC2Q8IWJ2 1684 aa10.31□□□□□ -0.76
TCF4-225ENST00000564999 HS6ST3Q8IZP7 471 aa10.31□□□□□ -0.76
TCF4-225ENST00000564999 ZFP91Q96JP5 570 aaPredicted RBP10.29□□□□□ -0.76
TCF4-225ENST00000564999 CROCC2H7BZ55 1655 aa10.29□□□□□ -0.76
TCF4-225ENST00000564999 SEMA3EO15041 775 aa10.29□□□□□ -0.76
TCF4-225ENST00000564999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.29□□□□□ -0.76
TCF4-225ENST00000564999 TAF7LQ5H9L4 462 aa10.28□□□□□ -0.76
TCF4-225ENST00000564999 PDS5BQ9NTI5 1447 aa10.28□□□□□ -0.76
TCF4-225ENST00000564999 A0A0U1RQG5 324 aaPredicted RBP10.28□□□□□ -0.76
TCF4-225ENST00000564999 MAGI3Q5TCQ9 1506 aa10.28□□□□□ -0.76
TCF4-225ENST00000564999 IRF5Q13568 498 aa10.27□□□□□ -0.76
TCF4-225ENST00000564999 RETREG2Q8NC44 543 aa10.27□□□□□ -0.76
TCF4-225ENST00000564999 KIAA0556O60303 1618 aa10.27□□□□□ -0.76
TCF4-225ENST00000564999 ZNF526Q8TF50 670 aaPredicted RBP10.27□□□□□ -0.77
TCF4-225ENST00000564999 CCDC136Q96JN2 1154 aa10.27□□□□□ -0.77
TCF4-225ENST00000564999 CEP170Q5SW79 1584 aa10.27□□□□□ -0.77
TCF4-225ENST00000564999 IQGAP2Q13576 1575 aa10.26□□□□□ -0.77
TCF4-225ENST00000564999 ZNF777Q9ULD5 760 aaPredicted RBP10.26□□□□□ -0.77
TCF4-225ENST00000564999 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
TCF4-225ENST00000564999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
TCF4-225ENST00000564999 IFT140Q96RY7 1462 aa10.25□□□□□ -0.77
TCF4-225ENST00000564999 E9PSI1 815 aa10.25□□□□□ -0.77
TCF4-225ENST00000564999 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
TCF4-225ENST00000564999 GAPVD1Q14C86 1478 aa10.24□□□□□ -0.77
TCF4-225ENST00000564999 LRRC9Q6ZRR7 1453 aa10.24□□□□□ -0.77
TCF4-225ENST00000564999 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
TCF4-225ENST00000564999 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
TCF4-225ENST00000564999 TMED8Q6PL24 325 aaPredicted RBP10.24□□□□□ -0.77
TCF4-225ENST00000564999 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
TCF4-225ENST00000564999 FBXW7Q969H0 707 aa10.23□□□□□ -0.77
TCF4-225ENST00000564999 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
TCF4-225ENST00000564999 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
TCF4-225ENST00000564999 FAM117AQ9C073 453 aa10.22□□□□□ -0.77
TCF4-225ENST00000564999 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
TCF4-225ENST00000564999 CARMIL1Q5VZK9 1371 aa10.21□□□□□ -0.77
TCF4-225ENST00000564999 MAPKBP1O60336 1514 aa10.21□□□□□ -0.78
TCF4-225ENST00000564999 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
TCF4-225ENST00000564999 ZEB1P37275 1124 aaPredicted RBP10.2□□□□□ -0.78
TCF4-225ENST00000564999 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
TCF4-225ENST00000564999 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
TCF4-225ENST00000564999 KDM5BQ9UGL1 1544 aa10.19□□□□□ -0.78
TCF4-225ENST00000564999 MAGI1Q96QZ7 1491 aaPredicted RBP10.18□□□□□ -0.78
TCF4-225ENST00000564999 FHAD1B1AJZ9 1412 aa10.18□□□□□ -0.78
TCF4-225ENST00000564999 NUP160Q12769 1436 aa10.18□□□□□ -0.78
TCF4-225ENST00000564999 CERS3Q8IU89 383 aa10.18□□□□□ -0.78
TCF4-225ENST00000564999 EHBP1L1Q8N3D4 1523 aa10.17□□□□□ -0.78
TCF4-225ENST00000564999 CARNS1A5YM72 827 aa10.17□□□□□ -0.78
TCF4-225ENST00000564999 CHD1O14646 1710 aa10.16□□□□□ -0.78
TCF4-225ENST00000564999 POLA2Q14181 598 aa10.16□□□□□ -0.78
TCF4-225ENST00000564999 ABCA8O94911 1581 aa10.16□□□□□ -0.78
TCF4-225ENST00000564999 PLCD3Q8N3E9 789 aa10.16□□□□□ -0.78
TCF4-225ENST00000564999 MYT1LQ9UL68 1186 aa10.16□□□□□ -0.78
TCF4-225ENST00000564999 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
TCF4-225ENST00000564999 RAPGEF6Q8TEU7 1601 aa10.15□□□□□ -0.78
TCF4-225ENST00000564999 ADGBQ8N7X0 1667 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms