RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 SCAPERQ9BY12 1400 aa20.42■□□□□ 0.86
HERC2-206ENST00000564519 RICTORQ6R327 1708 aa20.4■□□□□ 0.86
HERC2-206ENST00000564519 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.85
HERC2-206ENST00000564519 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
HERC2-206ENST00000564519 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
HERC2-206ENST00000564519 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
HERC2-206ENST00000564519 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
HERC2-206ENST00000564519 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
HERC2-206ENST00000564519 ZMYM4Q5VZL5 1548 aa20.35■□□□□ 0.85
HERC2-206ENST00000564519 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
HERC2-206ENST00000564519 FBXO41Q8TF61 875 aa20.34■□□□□ 0.85
HERC2-206ENST00000564519 BCORL1Q5H9F3 1711 aa20.33■□□□□ 0.85
HERC2-206ENST00000564519 ZFYVE16Q7Z3T8 1539 aa20.32■□□□□ 0.84
HERC2-206ENST00000564519 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
HERC2-206ENST00000564519 AFAP1Q8N556 730 aa20.31■□□□□ 0.84
HERC2-206ENST00000564519 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
HERC2-206ENST00000564519 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
HERC2-206ENST00000564519 MLECQ14165 292 aa20.3■□□□□ 0.84
HERC2-206ENST00000564519 MAGI2Q86UL8 1455 aa20.3■□□□□ 0.84
HERC2-206ENST00000564519 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
HERC2-206ENST00000564519 GPATCH8Q9UKJ3 1502 aaKnown RBP20.28■□□□□ 0.84
HERC2-206ENST00000564519 MTUS2Q5JR59 1369 aa20.28■□□□□ 0.84
HERC2-206ENST00000564519 ABCC1P33527 1531 aa20.26■□□□□ 0.83
HERC2-206ENST00000564519 TRAPPC8Q9Y2L5 1435 aa20.26■□□□□ 0.83
HERC2-206ENST00000564519 ZNF518AQ6AHZ1 1483 aa20.25■□□□□ 0.83
HERC2-206ENST00000564519 CDC42BPAQ5VT25 1732 aa20.25■□□□□ 0.83
HERC2-206ENST00000564519 SIGLEC1Q9BZZ2 1709 aa20.25■□□□□ 0.83
HERC2-206ENST00000564519 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
HERC2-206ENST00000564519 MYT1LQ9UL68 1186 aa20.24■□□□□ 0.83
HERC2-206ENST00000564519 KDM5CP41229 1560 aa20.24■□□□□ 0.83
HERC2-206ENST00000564519 LMTK3Q96Q04 1460 aa20.24■□□□□ 0.83
HERC2-206ENST00000564519 RIMS1Q86UR5 1692 aaKnown RBP20.23■□□□□ 0.83
HERC2-206ENST00000564519 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
HERC2-206ENST00000564519 ATP10AO60312 1499 aa20.22■□□□□ 0.83
HERC2-206ENST00000564519 EHBP1L1Q8N3D4 1523 aa20.22■□□□□ 0.83
HERC2-206ENST00000564519 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
HERC2-206ENST00000564519 HSPA2P54652 639 aa20.21■□□□□ 0.83
HERC2-206ENST00000564519 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
HERC2-206ENST00000564519 CFDP1Q9UEE9 299 aaPredicted RBP20.2■□□□□ 0.82
HERC2-206ENST00000564519 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
HERC2-206ENST00000564519 ITSN2Q9NZM3 1697 aa20.18■□□□□ 0.82
HERC2-206ENST00000564519 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
HERC2-206ENST00000564519 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.82
HERC2-206ENST00000564519 SYCP2Q9BX26 1530 aa20.17■□□□□ 0.82
HERC2-206ENST00000564519 TIAM1Q13009 1591 aa20.17■□□□□ 0.82
HERC2-206ENST00000564519 ZNF644Q9H582 1327 aaPredicted RBP20.15■□□□□ 0.82
HERC2-206ENST00000564519 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
HERC2-206ENST00000564519 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
HERC2-206ENST00000564519 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
HERC2-206ENST00000564519 ABCA6Q8N139 1617 aa20.13■□□□□ 0.81
HERC2-206ENST00000564519 KANK4Q5T7N3 995 aaPredicted RBP20.11■□□□□ 0.81
HERC2-206ENST00000564519 LRRC9Q6ZRR7 1453 aa20.11■□□□□ 0.81
HERC2-206ENST00000564519 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
HERC2-206ENST00000564519 PLEKHH2Q8IVE3 1493 aa20.1■□□□□ 0.81
HERC2-206ENST00000564519 KIDINS220Q9ULH0 1771 aa20.08■□□□□ 0.81
HERC2-206ENST00000564519 SPAG9O60271 1321 aaKnown RBP20.08■□□□□ 0.81
HERC2-206ENST00000564519 FER1L4A9Z1Z3 1794 aa20.08■□□□□ 0.8
HERC2-206ENST00000564519 REREQ9P2R6 1566 aa20.08■□□□□ 0.8
HERC2-206ENST00000564519 CEBPAP49715 358 aaPredicted RBP20.07■□□□□ 0.8
HERC2-206ENST00000564519 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
HERC2-206ENST00000564519 MBD5Q9P267 1494 aa20.06■□□□□ 0.8
HERC2-206ENST00000564519 CERKQ8TCT0 537 aa20.05■□□□□ 0.8
HERC2-206ENST00000564519 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
HERC2-206ENST00000564519 DMRT2Q9Y5R5 561 aa20.04■□□□□ 0.8
HERC2-206ENST00000564519 AGLP35573 1532 aa20.02■□□□□ 0.8
HERC2-206ENST00000564519 ATP7AQ04656 1500 aa20.02■□□□□ 0.8
HERC2-206ENST00000564519 INO80Q9ULG1 1556 aaPredicted RBP20.01■□□□□ 0.79
HERC2-206ENST00000564519 UHRF1BP1Q6BDS2 1440 aa20.01■□□□□ 0.79
HERC2-206ENST00000564519 CAMSAP2Q08AD1 1489 aa20■□□□□ 0.79
HERC2-206ENST00000564519 A2MP01023 1474 aa19.96■□□□□ 0.79
HERC2-206ENST00000564519 PREX1Q8TCU6 1659 aa19.95■□□□□ 0.78
HERC2-206ENST00000564519 CCDC141Q6ZP82 1450 aa19.95■□□□□ 0.78
HERC2-206ENST00000564519 APLP2Q06481 763 aa19.95■□□□□ 0.78
HERC2-206ENST00000564519 PLXNC1O60486 1568 aa19.95■□□□□ 0.78
HERC2-206ENST00000564519 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
HERC2-206ENST00000564519 MYOM3Q5VTT5 1437 aa19.93■□□□□ 0.78
HERC2-206ENST00000564519 RSPH4AQ5TD94 716 aa19.91■□□□□ 0.78
HERC2-206ENST00000564519 ARHGEF5Q12774 1597 aa19.89■□□□□ 0.77
HERC2-206ENST00000564519 MIA2Q96PC5 1412 aa19.89■□□□□ 0.77
HERC2-206ENST00000564519 CNTLNQ9NXG0 1405 aa19.89■□□□□ 0.77
HERC2-206ENST00000564519 GGT6Q6P531 493 aa19.88■□□□□ 0.77
HERC2-206ENST00000564519 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
HERC2-206ENST00000564519 ADGBQ8N7X0 1667 aa19.86■□□□□ 0.77
HERC2-206ENST00000564519 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
HERC2-206ENST00000564519 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
HERC2-206ENST00000564519 C3P01024 1663 aa19.84■□□□□ 0.77
HERC2-206ENST00000564519 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
HERC2-206ENST00000564519 PTPRTO14522 1441 aa19.82■□□□□ 0.76
HERC2-206ENST00000564519 KIF3BO15066 747 aa19.81■□□□□ 0.76
HERC2-206ENST00000564519 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
HERC2-206ENST00000564519 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
HERC2-206ENST00000564519 MAST1Q9Y2H9 1570 aa19.78■□□□□ 0.76
HERC2-206ENST00000564519 CLTCQ00610 1675 aaKnown RBP19.78■□□□□ 0.76
HERC2-206ENST00000564519 ABCC5O15440 1437 aa19.78■□□□□ 0.76
HERC2-206ENST00000564519 PTPN23Q9H3S7 1636 aa19.78■□□□□ 0.76
HERC2-206ENST00000564519 STRCQ7RTU9 1775 aa19.78■□□□□ 0.76
HERC2-206ENST00000564519 PPP6R1Q9UPN7 881 aa19.77■□□□□ 0.76
HERC2-206ENST00000564519 NPATQ14207 1427 aa19.76■□□□□ 0.75
HERC2-206ENST00000564519 MROH2AA6NES4 1674 aa19.76■□□□□ 0.75
HERC2-206ENST00000564519 TCOF1Q13428 1488 aaKnown RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms