RNA–Protein interactions for RNA: ENST00000564383.1

HERC2-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 471 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-205ENST00000564383 WDR97A6NE52 1622 aa10.91□□□□□ -0.66
HERC2-205ENST00000564383 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
HERC2-205ENST00000564383 CEP162Q5TB80 1403 aa10.9□□□□□ -0.66
HERC2-205ENST00000564383 CARMIL1Q5VZK9 1371 aa10.9□□□□□ -0.67
HERC2-205ENST00000564383 ABCA5Q8WWZ7 1642 aa10.88□□□□□ -0.67
HERC2-205ENST00000564383 ST18O60284 1047 aa10.88□□□□□ -0.67
HERC2-205ENST00000564383 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
HERC2-205ENST00000564383 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
HERC2-205ENST00000564383 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
HERC2-205ENST00000564383 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
HERC2-205ENST00000564383 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC2-205ENST00000564383 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
HERC2-205ENST00000564383 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
HERC2-205ENST00000564383 MIER1Q8N108 512 aa10.83□□□□□ -0.68
HERC2-205ENST00000564383 PCDHB13Q9Y5F0 798 aa10.83□□□□□ -0.68
HERC2-205ENST00000564383 CLIP1P30622 1438 aa10.82□□□□□ -0.68
HERC2-205ENST00000564383 GRIN2BQ13224 1484 aa10.79□□□□□ -0.68
HERC2-205ENST00000564383 CUL7Q14999 1698 aa10.79□□□□□ -0.68
HERC2-205ENST00000564383 MMRN1Q13201 1228 aa10.78□□□□□ -0.68
HERC2-205ENST00000564383 FHAD1B1AJZ9 1412 aa10.76□□□□□ -0.69
HERC2-205ENST00000564383 PLCG2P16885 1265 aa10.76□□□□□ -0.69
HERC2-205ENST00000564383 IFNL1Q8IU54 200 aa10.76□□□□□ -0.69
HERC2-205ENST00000564383 SPNS2Q8IVW8 549 aa10.76□□□□□ -0.69
HERC2-205ENST00000564383 EIF4G3O43432 1585 aaKnown RBP10.75□□□□□ -0.69
HERC2-205ENST00000564383 RANGAP1P46060 587 aaPredicted RBP10.75□□□□□ -0.69
HERC2-205ENST00000564383 ARAP1Q96P48 1450 aa10.74□□□□□ -0.69
HERC2-205ENST00000564383 ARHGAP35Q9NRY4 1499 aa10.74□□□□□ -0.69
HERC2-205ENST00000564383 ADAMTS12P58397 1594 aa10.74□□□□□ -0.69
HERC2-205ENST00000564383 TMEM106CQ9BVX2 250 aa10.74□□□□□ -0.69
HERC2-205ENST00000564383 TMEM121BQ9BXQ6 578 aaPredicted RBP10.74□□□□□ -0.69
HERC2-205ENST00000564383 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
HERC2-205ENST00000564383 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
HERC2-205ENST00000564383 IRX5P78411 483 aaPredicted RBP10.72□□□□□ -0.69
HERC2-205ENST00000564383 VPS8Q8N3P4 1428 aa10.72□□□□□ -0.69
HERC2-205ENST00000564383 NUBP1P53384 320 aa10.71□□□□□ -0.69
HERC2-205ENST00000564383 MAGI1Q96QZ7 1491 aaPredicted RBP10.69□□□□□ -0.7
HERC2-205ENST00000564383 PLCD3Q8N3E9 789 aa10.69□□□□□ -0.7
HERC2-205ENST00000564383 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
HERC2-205ENST00000564383 SNPHO15079 494 aa10.67□□□□□ -0.7
HERC2-205ENST00000564383 GRIN2AQ12879 1464 aa10.67□□□□□ -0.7
HERC2-205ENST00000564383 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
HERC2-205ENST00000564383 SYNJ2O15056 1496 aa10.66□□□□□ -0.7
HERC2-205ENST00000564383 MARVELD3Q96A59 401 aa10.65□□□□□ -0.7
HERC2-205ENST00000564383 OCEL1Q9H607 264 aa10.65□□□□□ -0.7
HERC2-205ENST00000564383 FAM212AQ96EL1 285 aa10.64□□□□□ -0.71
HERC2-205ENST00000564383 PCGF6Q9BYE7 350 aa10.64□□□□□ -0.71
HERC2-205ENST00000564383 TRIM26Q12899 539 aaPredicted RBP10.63□□□□□ -0.71
HERC2-205ENST00000564383 P3H3Q8IVL6 736 aa10.63□□□□□ -0.71
HERC2-205ENST00000564383 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
HERC2-205ENST00000564383 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
HERC2-205ENST00000564383 NUP160Q12769 1436 aa10.62□□□□□ -0.71
HERC2-205ENST00000564383 CHMP7Q8WUX9 453 aaPredicted RBP10.62□□□□□ -0.71
HERC2-205ENST00000564383 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
HERC2-205ENST00000564383 CTTNBP2Q8WZ74 1663 aa10.62□□□□□ -0.71
HERC2-205ENST00000564383 KIAA0586Q9BVV6 1533 aa10.62□□□□□ -0.71
HERC2-205ENST00000564383 SAMD9Q5K651 1589 aa10.6□□□□□ -0.71
HERC2-205ENST00000564383 CEP170Q5SW79 1584 aa10.6□□□□□ -0.71
HERC2-205ENST00000564383 IQGAP2Q13576 1575 aa10.6□□□□□ -0.71
HERC2-205ENST00000564383 UGGT2Q9NYU1 1516 aa10.59□□□□□ -0.71
HERC2-205ENST00000564383 TTBK1Q5TCY1 1321 aaPredicted RBP10.58□□□□□ -0.72
HERC2-205ENST00000564383 KANK4Q5T7N3 995 aaPredicted RBP10.57□□□□□ -0.72
HERC2-205ENST00000564383 DISP1Q96F81 1524 aa10.56□□□□□ -0.72
HERC2-205ENST00000564383 CASKIN1Q8WXD9 1431 aa10.55□□□□□ -0.72
HERC2-205ENST00000564383 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
HERC2-205ENST00000564383 FMN1Q68DA7 1419 aa10.53□□□□□ -0.72
HERC2-205ENST00000564383 EMP3P54852 163 aa10.53□□□□□ -0.72
HERC2-205ENST00000564383 FYCO1Q9BQS8 1478 aa10.52□□□□□ -0.73
HERC2-205ENST00000564383 MAP3K1Q13233 1512 aa10.52□□□□□ -0.73
HERC2-205ENST00000564383 JPH4Q96JJ6 628 aa10.51□□□□□ -0.73
HERC2-205ENST00000564383 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
HERC2-205ENST00000564383 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
HERC2-205ENST00000564383 PYGBP11216 843 aa10.5□□□□□ -0.73
HERC2-205ENST00000564383 TIAM1Q13009 1591 aa10.5□□□□□ -0.73
HERC2-205ENST00000564383 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
HERC2-205ENST00000564383 PDCD7Q8N8D1 485 aaKnown RBP10.49□□□□□ -0.73
HERC2-205ENST00000564383 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 C3orf67Q6ZVT6 689 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 LRRC9Q6ZRR7 1453 aa10.48□□□□□ -0.73
HERC2-205ENST00000564383 CHD1O14646 1710 aa10.47□□□□□ -0.73
HERC2-205ENST00000564383 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
HERC2-205ENST00000564383 PRG4Q92954 1404 aaPredicted RBP10.45□□□□□ -0.74
HERC2-205ENST00000564383 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
HERC2-205ENST00000564383 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
HERC2-205ENST00000564383 CLASP1Q7Z460 1538 aa10.44□□□□□ -0.74
HERC2-205ENST00000564383 CARMIL2Q6F5E8 1435 aa10.44□□□□□ -0.74
HERC2-205ENST00000564383 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
HERC2-205ENST00000564383 L3MBTL3Q96JM7 780 aaPredicted RBP10.43□□□□□ -0.74
HERC2-205ENST00000564383 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
HERC2-205ENST00000564383 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
HERC2-205ENST00000564383 EPRSP07814 1512 aaKnown RBP10.42□□□□□ -0.74
HERC2-205ENST00000564383 PLB1Q6P1J6 1458 aa10.42□□□□□ -0.74
HERC2-205ENST00000564383 RRBP1Q9P2E9 1410 aaKnown RBP10.41□□□□□ -0.74
HERC2-205ENST00000564383 PHLDB1Q86UU1 1377 aa10.41□□□□□ -0.74
HERC2-205ENST00000564383 MAGI3Q5TCQ9 1506 aa10.41□□□□□ -0.74
HERC2-205ENST00000564383 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
HERC2-205ENST00000564383 ERCC6L2Q5T890 1561 aa10.4□□□□□ -0.74
HERC2-205ENST00000564383 CDK13Q14004 1512 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms