RNA–Protein interactions for RNA: ENST00000563824.5

TCF4-220, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-220ENST00000563824 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
TCF4-220ENST00000563824 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
TCF4-220ENST00000563824 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
TCF4-220ENST00000563824 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
TCF4-220ENST00000563824 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
TCF4-220ENST00000563824 RSF1Q96T23 1441 aaPredicted RBP10.71□□□□□ -0.69
TCF4-220ENST00000563824 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 CFTRP13569 1480 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 ATMINO43313 823 aaPredicted RBP10.69□□□□□ -0.7
TCF4-220ENST00000563824 C7P10643 843 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 PSEN1P49768 467 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 P3H3Q8IVL6 736 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 CCDC61Q9Y6R9 512 aa10.69□□□□□ -0.7
TCF4-220ENST00000563824 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
TCF4-220ENST00000563824 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
TCF4-220ENST00000563824 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
TCF4-220ENST00000563824 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
TCF4-220ENST00000563824 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
TCF4-220ENST00000563824 SLC39A7Q92504 469 aa10.66□□□□□ -0.7
TCF4-220ENST00000563824 MS4A3Q96HJ5 214 aa10.65□□□□□ -0.7
TCF4-220ENST00000563824 MAMSTRQ6ZN01 415 aa10.62□□□□□ -0.71
TCF4-220ENST00000563824 ZNF608Q9ULD9 1512 aaPredicted RBP10.6□□□□□ -0.71
TCF4-220ENST00000563824 IFNL1Q8IU54 200 aa10.6□□□□□ -0.71
TCF4-220ENST00000563824 MFRPQ9BY79 579 aa10.6□□□□□ -0.71
TCF4-220ENST00000563824 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
TCF4-220ENST00000563824 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
TCF4-220ENST00000563824 MAP3K13O43283 966 aa10.58□□□□□ -0.72
TCF4-220ENST00000563824 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
TCF4-220ENST00000563824 CHD1O14646 1710 aa10.57□□□□□ -0.72
TCF4-220ENST00000563824 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
TCF4-220ENST00000563824 POTEFA5A3E0 1075 aa10.56□□□□□ -0.72
TCF4-220ENST00000563824 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
TCF4-220ENST00000563824 NLRP6P59044 892 aa10.55□□□□□ -0.72
TCF4-220ENST00000563824 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
TCF4-220ENST00000563824 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
TCF4-220ENST00000563824 KIF12Q96FN5 646 aa10.55□□□□□ -0.72
TCF4-220ENST00000563824 FAM163AQ96GL9 167 aaPredicted RBP10.55□□□□□ -0.72
TCF4-220ENST00000563824 ATN1P54259 1190 aaPredicted RBP10.54□□□□□ -0.72
TCF4-220ENST00000563824 WIZO95785 1651 aa10.53□□□□□ -0.72
TCF4-220ENST00000563824 SOX12O15370 315 aa10.52□□□□□ -0.73
TCF4-220ENST00000563824 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
TCF4-220ENST00000563824 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
TCF4-220ENST00000563824 TULP1O00294 542 aaPredicted RBP10.49□□□□□ -0.73
TCF4-220ENST00000563824 GOLGA2Q08379 1002 aa10.49□□□□□ -0.73
TCF4-220ENST00000563824 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
TCF4-220ENST00000563824 PPP1R37O75864 691 aa10.48□□□□□ -0.73
TCF4-220ENST00000563824 FBXO22Q8NEZ5 403 aa10.48□□□□□ -0.73
TCF4-220ENST00000563824 CLASP1Q7Z460 1538 aa10.47□□□□□ -0.73
TCF4-220ENST00000563824 SYNJ1O43426 1573 aa10.47□□□□□ -0.73
TCF4-220ENST00000563824 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.73
TCF4-220ENST00000563824 WDR97A6NE52 1622 aa10.45□□□□□ -0.74
TCF4-220ENST00000563824 TARBP1Q13395 1621 aaKnown RBP10.45□□□□□ -0.74
TCF4-220ENST00000563824 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.74
TCF4-220ENST00000563824 DNMBPQ6XZF7 1577 aa10.44□□□□□ -0.74
TCF4-220ENST00000563824 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
TCF4-220ENST00000563824 TRPC6Q9Y210 931 aa10.44□□□□□ -0.74
TCF4-220ENST00000563824 TOP2AP11388 1531 aaKnown RBP10.43□□□□□ -0.74
TCF4-220ENST00000563824 E2F4Q16254 413 aa10.42□□□□□ -0.74
TCF4-220ENST00000563824 ARHGEF1Q92888 912 aaKnown RBP10.41□□□□□ -0.74
TCF4-220ENST00000563824 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
TCF4-220ENST00000563824 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
TCF4-220ENST00000563824 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
TCF4-220ENST00000563824 MAGI1Q96QZ7 1491 aaPredicted RBP10.4□□□□□ -0.74
TCF4-220ENST00000563824 TIE1P35590 1138 aa10.39□□□□□ -0.75
TCF4-220ENST00000563824 COLQQ9Y215 455 aaPredicted RBP10.39□□□□□ -0.75
TCF4-220ENST00000563824 MKRN3Q13064 507 aaKnown RBP10.38□□□□□ -0.75
TCF4-220ENST00000563824 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
TCF4-220ENST00000563824 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
TCF4-220ENST00000563824 PDE4AP27815 886 aa10.36□□□□□ -0.75
TCF4-220ENST00000563824 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
TCF4-220ENST00000563824 MS4A4AQ96JQ5 239 aa10.35□□□□□ -0.75
TCF4-220ENST00000563824 POLA1P09884 1462 aaPredicted RBP10.35□□□□□ -0.75
TCF4-220ENST00000563824 SNAPC4Q5SXM2 1469 aa10.35□□□□□ -0.75
TCF4-220ENST00000563824 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
TCF4-220ENST00000563824 SYNJ2O15056 1496 aa10.34□□□□□ -0.75
TCF4-220ENST00000563824 TTLL13PA6NNM8 815 aa10.33□□□□□ -0.76
TCF4-220ENST00000563824 DDX27Q96GQ7 796 aaKnown RBP10.33□□□□□ -0.76
TCF4-220ENST00000563824 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
TCF4-220ENST00000563824 SOGA1O94964 1423 aa10.32□□□□□ -0.76
TCF4-220ENST00000563824 TDRD9Q8NDG6 1382 aaKnown RBP10.3□□□□□ -0.76
TCF4-220ENST00000563824 SEMA3EO15041 775 aa10.3□□□□□ -0.76
TCF4-220ENST00000563824 KIF13AQ9H1H9 1805 aa10.3□□□□□ -0.76
TCF4-220ENST00000563824 KDM4FA0A1W2PPD8 638 aa10.29□□□□□ -0.76
TCF4-220ENST00000563824 MFSD10Q14728 455 aa10.29□□□□□ -0.76
TCF4-220ENST00000563824 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
TCF4-220ENST00000563824 CCDC88BA6NC98 1476 aa10.29□□□□□ -0.76
TCF4-220ENST00000563824 IER5LQ5T953 404 aa10.28□□□□□ -0.76
TCF4-220ENST00000563824 TESPA1A2RU30 521 aaPredicted RBP10.27□□□□□ -0.77
TCF4-220ENST00000563824 RAD54L2Q9Y4B4 1467 aa10.26□□□□□ -0.77
TCF4-220ENST00000563824 ST18O60284 1047 aa10.26□□□□□ -0.77
TCF4-220ENST00000563824 SEC24BO95487 1268 aa10.26□□□□□ -0.77
TCF4-220ENST00000563824 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
TCF4-220ENST00000563824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
TCF4-220ENST00000563824 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
TCF4-220ENST00000563824 TMEM132AQ24JP5 1023 aa10.24□□□□□ -0.77
TCF4-220ENST00000563824 ZC3H15Q8WU90 426 aaKnown RBP10.24□□□□□ -0.77
TCF4-220ENST00000563824 TRIM35Q9UPQ4 493 aa10.23□□□□□ -0.77
TCF4-220ENST00000563824 GTF3C3Q9Y5Q9 886 aa10.22□□□□□ -0.77
TCF4-220ENST00000563824 ABCC10Q5T3U5 1492 aa10.22□□□□□ -0.77
TCF4-220ENST00000563824 PPP1R15BQ5SWA1 713 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms