RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 FYCO1Q9BQS8 1478 aa25.71■■□□□ 1.71
LPCAT4-205ENST00000563748 SCAPERQ9BY12 1400 aa25.71■■□□□ 1.71
LPCAT4-205ENST00000563748 ZFYVE16Q7Z3T8 1539 aa25.71■■□□□ 1.71
LPCAT4-205ENST00000563748 MAGI2Q86UL8 1455 aa25.71■■□□□ 1.71
LPCAT4-205ENST00000563748 EFCAB2Q5VUJ9 269 aa25.69■■□□□ 1.7
LPCAT4-205ENST00000563748 YEATS2Q9ULM3 1422 aa25.67■■□□□ 1.7
LPCAT4-205ENST00000563748 MADDQ8WXG6 1647 aa25.67■■□□□ 1.7
LPCAT4-205ENST00000563748 PTPRMP28827 1452 aa25.67■■□□□ 1.7
LPCAT4-205ENST00000563748 ARHGAP5Q13017 1502 aa25.66■■□□□ 1.7
LPCAT4-205ENST00000563748 CDC42BPBQ9Y5S2 1711 aa25.66■■□□□ 1.7
LPCAT4-205ENST00000563748 SIGLEC1Q9BZZ2 1709 aa25.65■■□□□ 1.7
LPCAT4-205ENST00000563748 ARID4BQ4LE39 1312 aaPredicted RBP25.65■■□□□ 1.7
LPCAT4-205ENST00000563748 PREX2Q70Z35 1606 aa25.64■■□□□ 1.69
LPCAT4-205ENST00000563748 KDM5CP41229 1560 aa25.59■■□□□ 1.69
LPCAT4-205ENST00000563748 RIMS1Q86UR5 1692 aaKnown RBP25.59■■□□□ 1.69
LPCAT4-205ENST00000563748 ZNF518AQ6AHZ1 1483 aa25.59■■□□□ 1.69
LPCAT4-205ENST00000563748 CDC42BPAQ5VT25 1732 aa25.58■■□□□ 1.69
LPCAT4-205ENST00000563748 ATP10AO60312 1499 aa25.55■■□□□ 1.68
LPCAT4-205ENST00000563748 ABCC1P33527 1531 aa25.54■■□□□ 1.68
LPCAT4-205ENST00000563748 ITSN2Q9NZM3 1697 aa25.52■■□□□ 1.68
LPCAT4-205ENST00000563748 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
LPCAT4-205ENST00000563748 FER1L4A9Z1Z3 1794 aa25.5■■□□□ 1.67
LPCAT4-205ENST00000563748 AFAP1Q8N556 730 aa25.49■■□□□ 1.67
LPCAT4-205ENST00000563748 ARHGEF12Q9NZN5 1544 aa25.49■■□□□ 1.67
LPCAT4-205ENST00000563748 DIP2CQ9Y2E4 1556 aa25.48■■□□□ 1.67
LPCAT4-205ENST00000563748 CEP162Q5TB80 1403 aa25.47■■□□□ 1.67
LPCAT4-205ENST00000563748 MLH3Q9UHC1 1453 aa25.46■■□□□ 1.67
LPCAT4-205ENST00000563748 TRAPPC8Q9Y2L5 1435 aa25.45■■□□□ 1.67
LPCAT4-205ENST00000563748 ABCA6Q8N139 1617 aa25.45■■□□□ 1.66
LPCAT4-205ENST00000563748 REREQ9P2R6 1566 aa25.45■■□□□ 1.66
LPCAT4-205ENST00000563748 GPATCH8Q9UKJ3 1502 aaKnown RBP25.44■■□□□ 1.66
LPCAT4-205ENST00000563748 SAMD9LQ8IVG5 1584 aa25.43■■□□□ 1.66
LPCAT4-205ENST00000563748 LMTK3Q96Q04 1460 aa25.42■■□□□ 1.66
LPCAT4-205ENST00000563748 MLECQ14165 292 aa25.42■■□□□ 1.66
LPCAT4-205ENST00000563748 KIDINS220Q9ULH0 1771 aa25.4■■□□□ 1.66
LPCAT4-205ENST00000563748 MTUS2Q5JR59 1369 aa25.38■■□□□ 1.65
LPCAT4-205ENST00000563748 SYCP2Q9BX26 1530 aa25.37■■□□□ 1.65
LPCAT4-205ENST00000563748 EHBP1L1Q8N3D4 1523 aa25.37■■□□□ 1.65
LPCAT4-205ENST00000563748 MYT1LQ9UL68 1186 aa25.36■■□□□ 1.65
LPCAT4-205ENST00000563748 AGLP35573 1532 aa25.34■■□□□ 1.65
LPCAT4-205ENST00000563748 CCNB3Q8WWL7 1395 aa25.34■■□□□ 1.65
LPCAT4-205ENST00000563748 ZNF777Q9ULD5 760 aaPredicted RBP25.33■■□□□ 1.65
LPCAT4-205ENST00000563748 TIAM1Q13009 1591 aa25.33■■□□□ 1.64
LPCAT4-205ENST00000563748 KIAA1107Q9UPP5 1409 aa25.32■■□□□ 1.64
LPCAT4-205ENST00000563748 PLEKHH2Q8IVE3 1493 aa25.32■■□□□ 1.64
LPCAT4-205ENST00000563748 CFDP1Q9UEE9 299 aaPredicted RBP25.31■■□□□ 1.64
LPCAT4-205ENST00000563748 PLPPR3Q6T4P5 718 aa25.3■■□□□ 1.64
LPCAT4-205ENST00000563748 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
LPCAT4-205ENST00000563748 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
LPCAT4-205ENST00000563748 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.64
LPCAT4-205ENST00000563748 PREX1Q8TCU6 1659 aa25.26■■□□□ 1.63
LPCAT4-205ENST00000563748 ATP7AQ04656 1500 aa25.25■■□□□ 1.63
LPCAT4-205ENST00000563748 SPAG9O60271 1321 aaKnown RBP25.24■■□□□ 1.63
LPCAT4-205ENST00000563748 ILDR1Q86SU0 546 aaPredicted RBP25.24■■□□□ 1.63
LPCAT4-205ENST00000563748 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
LPCAT4-205ENST00000563748 C3P01024 1663 aa25.22■■□□□ 1.63
LPCAT4-205ENST00000563748 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
LPCAT4-205ENST00000563748 PLXNC1O60486 1568 aa25.2■■□□□ 1.62
LPCAT4-205ENST00000563748 CEBPAP49715 358 aaPredicted RBP25.19■■□□□ 1.62
LPCAT4-205ENST00000563748 HSPA2P54652 639 aa25.19■■□□□ 1.62
LPCAT4-205ENST00000563748 NCOA2Q15596 1464 aa25.19■■□□□ 1.62
LPCAT4-205ENST00000563748 ZNF644Q9H582 1327 aaPredicted RBP25.18■■□□□ 1.62
LPCAT4-205ENST00000563748 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
LPCAT4-205ENST00000563748 MBD5Q9P267 1494 aa25.18■■□□□ 1.62
LPCAT4-205ENST00000563748 ADGBQ8N7X0 1667 aa25.16■■□□□ 1.62
LPCAT4-205ENST00000563748 CNTLNQ9NXG0 1405 aa25.15■■□□□ 1.62
LPCAT4-205ENST00000563748 A2MP01023 1474 aa25.14■■□□□ 1.62
LPCAT4-205ENST00000563748 MROH2AA6NES4 1674 aa25.14■■□□□ 1.62
LPCAT4-205ENST00000563748 ESF1Q9H501 851 aaKnown RBP25.12■■□□□ 1.61
LPCAT4-205ENST00000563748 LRRC9Q6ZRR7 1453 aa25.11■■□□□ 1.61
LPCAT4-205ENST00000563748 CAMSAP2Q08AD1 1489 aa25.1■■□□□ 1.61
LPCAT4-205ENST00000563748 UHRF1BP1Q6BDS2 1440 aa25.1■■□□□ 1.61
LPCAT4-205ENST00000563748 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
LPCAT4-205ENST00000563748 RTEL1-TNFRSF6BF6WH68 1400 aa25.09■■□□□ 1.61
LPCAT4-205ENST00000563748 CCDC141Q6ZP82 1450 aa25.06■■□□□ 1.6
LPCAT4-205ENST00000563748 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
LPCAT4-205ENST00000563748 STRCQ7RTU9 1775 aa25.04■■□□□ 1.6
LPCAT4-205ENST00000563748 ARHGEF5Q12774 1597 aa25.03■■□□□ 1.6
LPCAT4-205ENST00000563748 NPATQ14207 1427 aa25.02■■□□□ 1.6
LPCAT4-205ENST00000563748 ZMYM3Q14202 1370 aa25■■□□□ 1.59
LPCAT4-205ENST00000563748 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
LPCAT4-205ENST00000563748 KANK4Q5T7N3 995 aaPredicted RBP24.98■■□□□ 1.59
LPCAT4-205ENST00000563748 FBXO41Q8TF61 875 aa24.98■■□□□ 1.59
LPCAT4-205ENST00000563748 DHX29Q7Z478 1369 aaKnown RBP24.98■■□□□ 1.59
LPCAT4-205ENST00000563748 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
LPCAT4-205ENST00000563748 GGT6Q6P531 493 aa24.95■■□□□ 1.59
LPCAT4-205ENST00000563748 MYOM3Q5VTT5 1437 aa24.93■■□□□ 1.58
LPCAT4-205ENST00000563748 PTPRKQ15262 1439 aa24.92■■□□□ 1.58
LPCAT4-205ENST00000563748 MAST1Q9Y2H9 1570 aa24.92■■□□□ 1.58
LPCAT4-205ENST00000563748 MIA2Q96PC5 1412 aa24.91■■□□□ 1.58
LPCAT4-205ENST00000563748 MYO3AQ8NEV4 1616 aa24.91■■□□□ 1.58
LPCAT4-205ENST00000563748 ZNF142P52746 1687 aaPredicted RBP24.91■■□□□ 1.58
LPCAT4-205ENST00000563748 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
LPCAT4-205ENST00000563748 DMRT2Q9Y5R5 561 aa24.91■■□□□ 1.58
LPCAT4-205ENST00000563748 FAM135AQ9P2D6 1515 aa24.9■■□□□ 1.58
LPCAT4-205ENST00000563748 PCGF6Q9BYE7 350 aa24.89■■□□□ 1.57
LPCAT4-205ENST00000563748 PTPRTO14522 1441 aa24.87■■□□□ 1.57
LPCAT4-205ENST00000563748 NCOA1Q15788 1441 aa24.87■■□□□ 1.57
LPCAT4-205ENST00000563748 TSPY4P0CV99 314 aa24.87■■□□□ 1.57
LPCAT4-205ENST00000563748 TSPY10P0CW01 314 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms