RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MAP3K1Q13233 1512 aa13.55□□□□□ -0.24
UBR1-204ENST00000563239 EHBP1L1Q8N3D4 1523 aa13.55□□□□□ -0.24
UBR1-204ENST00000563239 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
UBR1-204ENST00000563239 EFCAB2Q5VUJ9 269 aa13.55□□□□□ -0.24
UBR1-204ENST00000563239 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
UBR1-204ENST00000563239 CDC42BPAQ5VT25 1732 aa13.54□□□□□ -0.24
UBR1-204ENST00000563239 KANK4Q5T7N3 995 aaPredicted RBP13.54□□□□□ -0.24
UBR1-204ENST00000563239 LRRC9Q6ZRR7 1453 aa13.54□□□□□ -0.24
UBR1-204ENST00000563239 ARHGAP5Q13017 1502 aa13.54□□□□□ -0.24
UBR1-204ENST00000563239 DENND4BO75064 1496 aaPredicted RBP13.53□□□□□ -0.24
UBR1-204ENST00000563239 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
UBR1-204ENST00000563239 ADGRL1O94910 1474 aa13.52□□□□□ -0.25
UBR1-204ENST00000563239 RICTORQ6R327 1708 aa13.52□□□□□ -0.25
UBR1-204ENST00000563239 ARHGEF12Q9NZN5 1544 aa13.5□□□□□ -0.25
UBR1-204ENST00000563239 NCOA2Q15596 1464 aa13.5□□□□□ -0.25
UBR1-204ENST00000563239 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
UBR1-204ENST00000563239 POGZQ7Z3K3 1410 aa13.49□□□□□ -0.25
UBR1-204ENST00000563239 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
UBR1-204ENST00000563239 SAMD9LQ8IVG5 1584 aa13.48□□□□□ -0.25
UBR1-204ENST00000563239 ABCC1P33527 1531 aa13.48□□□□□ -0.25
UBR1-204ENST00000563239 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
UBR1-204ENST00000563239 SUPT6HQ7KZ85 1726 aaKnown RBP13.47□□□□□ -0.25
UBR1-204ENST00000563239 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
UBR1-204ENST00000563239 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
UBR1-204ENST00000563239 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.26
UBR1-204ENST00000563239 ZNF644Q9H582 1327 aaPredicted RBP13.44□□□□□ -0.26
UBR1-204ENST00000563239 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
UBR1-204ENST00000563239 SOCS7O14512 581 aa13.44□□□□□ -0.26
UBR1-204ENST00000563239 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
UBR1-204ENST00000563239 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
UBR1-204ENST00000563239 KDM5CP41229 1560 aa13.44□□□□□ -0.26
UBR1-204ENST00000563239 ZNF518AQ6AHZ1 1483 aa13.43□□□□□ -0.26
UBR1-204ENST00000563239 KDM4FA0A1W2PPD8 638 aa13.43□□□□□ -0.26
UBR1-204ENST00000563239 KIAA1107Q9UPP5 1409 aa13.43□□□□□ -0.26
UBR1-204ENST00000563239 ARHGEF40Q8TER5 1519 aa13.43□□□□□ -0.26
UBR1-204ENST00000563239 MAGI2Q86UL8 1455 aa13.42□□□□□ -0.26
UBR1-204ENST00000563239 HNRNPMP52272 730 aaKnown RBP eCLIP13.42□□□□□ -0.26
UBR1-204ENST00000563239 APLP2Q06481 763 aa13.42□□□□□ -0.26
UBR1-204ENST00000563239 SYCP2Q9BX26 1530 aa13.42□□□□□ -0.26
UBR1-204ENST00000563239 ZFYVE16Q7Z3T8 1539 aa13.41□□□□□ -0.26
UBR1-204ENST00000563239 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
UBR1-204ENST00000563239 MBD5Q9P267 1494 aa13.41□□□□□ -0.26
UBR1-204ENST00000563239 PLEKHH2Q8IVE3 1493 aa13.4□□□□□ -0.26
UBR1-204ENST00000563239 MLH3Q9UHC1 1453 aa13.4□□□□□ -0.26
UBR1-204ENST00000563239 SIGLEC1Q9BZZ2 1709 aa13.39□□□□□ -0.27
UBR1-204ENST00000563239 MYOM3Q5VTT5 1437 aa13.39□□□□□ -0.27
UBR1-204ENST00000563239 HECW2Q9P2P5 1572 aa13.37□□□□□ -0.27
UBR1-204ENST00000563239 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
UBR1-204ENST00000563239 ATP10AO60312 1499 aa13.36□□□□□ -0.27
UBR1-204ENST00000563239 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
UBR1-204ENST00000563239 MIA2Q96PC5 1412 aa13.36□□□□□ -0.27
UBR1-204ENST00000563239 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
UBR1-204ENST00000563239 ABCA6Q8N139 1617 aa13.35□□□□□ -0.27
UBR1-204ENST00000563239 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
UBR1-204ENST00000563239 INO80Q9ULG1 1556 aaPredicted RBP13.33□□□□□ -0.28
UBR1-204ENST00000563239 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
UBR1-204ENST00000563239 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
UBR1-204ENST00000563239 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
UBR1-204ENST00000563239 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
UBR1-204ENST00000563239 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
UBR1-204ENST00000563239 FGD6Q6ZV73 1430 aa13.31□□□□□ -0.28
UBR1-204ENST00000563239 CCDC141Q6ZP82 1450 aa13.31□□□□□ -0.28
UBR1-204ENST00000563239 BCORL1Q5H9F3 1711 aa13.31□□□□□ -0.28
UBR1-204ENST00000563239 ILDR2Q71H61 639 aa13.31□□□□□ -0.28
UBR1-204ENST00000563239 TCOF1Q13428 1488 aaKnown RBP13.3□□□□□ -0.28
UBR1-204ENST00000563239 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
UBR1-204ENST00000563239 PPARGC1BQ86YN6 1023 aaKnown RBP13.3□□□□□ -0.28
UBR1-204ENST00000563239 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
UBR1-204ENST00000563239 PTPN23Q9H3S7 1636 aa13.3□□□□□ -0.28
UBR1-204ENST00000563239 ARID4BQ4LE39 1312 aaPredicted RBP13.3□□□□□ -0.28
UBR1-204ENST00000563239 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
UBR1-204ENST00000563239 AGLP35573 1532 aa13.28□□□□□ -0.28
UBR1-204ENST00000563239 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
UBR1-204ENST00000563239 ABCC5O15440 1437 aa13.26□□□□□ -0.29
UBR1-204ENST00000563239 PLXNC1O60486 1568 aa13.26□□□□□ -0.29
UBR1-204ENST00000563239 MADDQ8WXG6 1647 aa13.26□□□□□ -0.29
UBR1-204ENST00000563239 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
UBR1-204ENST00000563239 A2MP01023 1474 aa13.25□□□□□ -0.29
UBR1-204ENST00000563239 MLECQ14165 292 aa13.25□□□□□ -0.29
UBR1-204ENST00000563239 TSPY4P0CV99 314 aa13.24□□□□□ -0.29
UBR1-204ENST00000563239 TSPY10P0CW01 314 aa13.24□□□□□ -0.29
UBR1-204ENST00000563239 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
UBR1-204ENST00000563239 PTPRMP28827 1452 aa13.23□□□□□ -0.29
UBR1-204ENST00000563239 DNMT1P26358 1616 aaKnown RBP13.23□□□□□ -0.29
UBR1-204ENST00000563239 DAPK1P53355 1430 aa13.22□□□□□ -0.29
UBR1-204ENST00000563239 DHX29Q7Z478 1369 aaKnown RBP13.22□□□□□ -0.29
UBR1-204ENST00000563239 SHANK2Q9UPX8 1470 aa13.21□□□□□ -0.3
UBR1-204ENST00000563239 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
UBR1-204ENST00000563239 RIMS1Q86UR5 1692 aaKnown RBP13.21□□□□□ -0.3
UBR1-204ENST00000563239 FAM50AQ14320 339 aaKnown RBP13.19□□□□□ -0.3
UBR1-204ENST00000563239 FER1L4A9Z1Z3 1794 aa13.19□□□□□ -0.3
UBR1-204ENST00000563239 PTPRKQ15262 1439 aa13.18□□□□□ -0.3
UBR1-204ENST00000563239 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
UBR1-204ENST00000563239 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBR1-204ENST00000563239 NCOA1Q15788 1441 aa13.15□□□□□ -0.3
UBR1-204ENST00000563239 RRBP1Q9P2E9 1410 aaKnown RBP13.15□□□□□ -0.3
UBR1-204ENST00000563239 RRP7BPQ9NSQ0 103 aa13.15□□□□□ -0.3
UBR1-204ENST00000563239 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
UBR1-204ENST00000563239 ADGRL2O95490 1459 aa13.15□□□□□ -0.3
UBR1-204ENST00000563239 DUOX2Q9NRD8 1548 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms