RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 PCF11O94913 1555 aaKnown RBP9.94□□□□□ -0.82
CNOT1-204ENST00000563130 MAP3K4Q9Y6R4 1608 aa9.94□□□□□ -0.82
CNOT1-204ENST00000563130 FYCO1Q9BQS8 1478 aa9.94□□□□□ -0.82
CNOT1-204ENST00000563130 PLEKHD1A6NEE1 506 aa9.93□□□□□ -0.82
CNOT1-204ENST00000563130 POLA2Q14181 598 aa9.93□□□□□ -0.82
CNOT1-204ENST00000563130 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
CNOT1-204ENST00000563130 LRRIQ1Q96JM4 1722 aa9.92□□□□□ -0.82
CNOT1-204ENST00000563130 PPRC1Q5VV67 1664 aaKnown RBP9.92□□□□□ -0.82
CNOT1-204ENST00000563130 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
CNOT1-204ENST00000563130 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
CNOT1-204ENST00000563130 ABCA9Q8IUA7 1624 aa9.91□□□□□ -0.82
CNOT1-204ENST00000563130 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
CNOT1-204ENST00000563130 CD109Q6YHK3 1445 aa9.9□□□□□ -0.82
CNOT1-204ENST00000563130 MAGI3Q5TCQ9 1506 aa9.9□□□□□ -0.82
CNOT1-204ENST00000563130 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.83
CNOT1-204ENST00000563130 TSPOAP1O95153 1857 aa9.89□□□□□ -0.83
CNOT1-204ENST00000563130 TROQ12816 1431 aaPredicted RBP9.88□□□□□ -0.83
CNOT1-204ENST00000563130 TEX14Q8IWB6 1497 aa9.88□□□□□ -0.83
CNOT1-204ENST00000563130 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
CNOT1-204ENST00000563130 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.88□□□□□ -0.83
CNOT1-204ENST00000563130 COL17A1Q9UMD9 1497 aaPredicted RBP9.85□□□□□ -0.83
CNOT1-204ENST00000563130 TTC37Q6PGP7 1564 aa9.85□□□□□ -0.83
CNOT1-204ENST00000563130 KIF14Q15058 1648 aa9.84□□□□□ -0.83
CNOT1-204ENST00000563130 KDM6BO15054 1643 aa9.84□□□□□ -0.83
CNOT1-204ENST00000563130 PHLDB1Q86UU1 1377 aa9.83□□□□□ -0.84
CNOT1-204ENST00000563130 NEO1Q92859 1461 aa9.83□□□□□ -0.84
CNOT1-204ENST00000563130 PLCH2O75038 1416 aa9.83□□□□□ -0.84
CNOT1-204ENST00000563130 ZBTB12Q9Y330 459 aaPredicted RBP9.82□□□□□ -0.84
CNOT1-204ENST00000563130 ARAP3Q8WWN8 1544 aa9.82□□□□□ -0.84
CNOT1-204ENST00000563130 MAP3K1Q13233 1512 aa9.81□□□□□ -0.84
CNOT1-204ENST00000563130 TIAM1Q13009 1591 aa9.8□□□□□ -0.84
CNOT1-204ENST00000563130 FANCAO15360 1455 aa9.8□□□□□ -0.84
CNOT1-204ENST00000563130 MTUS2Q5JR59 1369 aa9.8□□□□□ -0.84
CNOT1-204ENST00000563130 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
CNOT1-204ENST00000563130 MYO5CQ9NQX4 1742 aa9.78□□□□□ -0.84
CNOT1-204ENST00000563130 AKNAQ7Z591 1439 aa9.78□□□□□ -0.84
CNOT1-204ENST00000563130 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.85
CNOT1-204ENST00000563130 LRRC9Q6ZRR7 1453 aa9.77□□□□□ -0.85
CNOT1-204ENST00000563130 GPATCH8Q9UKJ3 1502 aaKnown RBP9.77□□□□□ -0.85
CNOT1-204ENST00000563130 EFCAB2Q5VUJ9 269 aa9.77□□□□□ -0.85
CNOT1-204ENST00000563130 PREX2Q70Z35 1606 aa9.76□□□□□ -0.85
CNOT1-204ENST00000563130 CDC42BPBQ9Y5S2 1711 aa9.76□□□□□ -0.85
CNOT1-204ENST00000563130 KANK4Q5T7N3 995 aaPredicted RBP9.76□□□□□ -0.85
CNOT1-204ENST00000563130 CDC42BPAQ5VT25 1732 aa9.75□□□□□ -0.85
CNOT1-204ENST00000563130 ARHGAP5Q13017 1502 aa9.75□□□□□ -0.85
CNOT1-204ENST00000563130 ADGRL1O94910 1474 aa9.75□□□□□ -0.85
CNOT1-204ENST00000563130 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
CNOT1-204ENST00000563130 FRMPD1Q5SYB0 1578 aa9.75□□□□□ -0.85
CNOT1-204ENST00000563130 DENND4BO75064 1496 aaPredicted RBP9.74□□□□□ -0.85
CNOT1-204ENST00000563130 NCOA2Q15596 1464 aa9.74□□□□□ -0.85
CNOT1-204ENST00000563130 CCNB3Q8WWL7 1395 aa9.74□□□□□ -0.85
CNOT1-204ENST00000563130 SCAPERQ9BY12 1400 aa9.74□□□□□ -0.85
CNOT1-204ENST00000563130 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
CNOT1-204ENST00000563130 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
CNOT1-204ENST00000563130 POGZQ7Z3K3 1410 aa9.72□□□□□ -0.85
CNOT1-204ENST00000563130 ABCC1P33527 1531 aa9.71□□□□□ -0.85
CNOT1-204ENST00000563130 ZMYM4Q5VZL5 1548 aa9.71□□□□□ -0.85
CNOT1-204ENST00000563130 ARHGEF12Q9NZN5 1544 aa9.71□□□□□ -0.85
CNOT1-204ENST00000563130 CFDP1Q9UEE9 299 aaPredicted RBP9.71□□□□□ -0.85
CNOT1-204ENST00000563130 SAMD9LQ8IVG5 1584 aa9.7□□□□□ -0.86
CNOT1-204ENST00000563130 KIAA1107Q9UPP5 1409 aa9.7□□□□□ -0.86
CNOT1-204ENST00000563130 ZNF518AQ6AHZ1 1483 aa9.69□□□□□ -0.86
CNOT1-204ENST00000563130 MAGI2Q86UL8 1455 aa9.69□□□□□ -0.86
CNOT1-204ENST00000563130 ITSN2Q9NZM3 1697 aa9.69□□□□□ -0.86
CNOT1-204ENST00000563130 KDM5CP41229 1560 aa9.69□□□□□ -0.86
CNOT1-204ENST00000563130 TRAPPC8Q9Y2L5 1435 aa9.69□□□□□ -0.86
CNOT1-204ENST00000563130 AFAP1Q8N556 730 aa9.68□□□□□ -0.86
CNOT1-204ENST00000563130 PLEKHH2Q8IVE3 1493 aa9.68□□□□□ -0.86
CNOT1-204ENST00000563130 ZNF777Q9ULD5 760 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-204ENST00000563130 ZNF644Q9H582 1327 aaPredicted RBP9.67□□□□□ -0.86
CNOT1-204ENST00000563130 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
CNOT1-204ENST00000563130 MBD5Q9P267 1494 aa9.67□□□□□ -0.86
CNOT1-204ENST00000563130 MYOM3Q5VTT5 1437 aa9.67□□□□□ -0.86
CNOT1-204ENST00000563130 MKRN4PQ13434 485 aaPredicted RBP9.67□□□□□ -0.86
CNOT1-204ENST00000563130 MLH3Q9UHC1 1453 aa9.66□□□□□ -0.86
CNOT1-204ENST00000563130 MIA2Q96PC5 1412 aa9.66□□□□□ -0.86
CNOT1-204ENST00000563130 YEATS2Q9ULM3 1422 aa9.66□□□□□ -0.86
CNOT1-204ENST00000563130 ARHGEF40Q8TER5 1519 aa9.66□□□□□ -0.86
CNOT1-204ENST00000563130 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
CNOT1-204ENST00000563130 ZFYVE16Q7Z3T8 1539 aa9.65□□□□□ -0.86
CNOT1-204ENST00000563130 CAMSAP2Q08AD1 1489 aa9.65□□□□□ -0.87
CNOT1-204ENST00000563130 SLC24A1O60721 1099 aa9.65□□□□□ -0.87
CNOT1-204ENST00000563130 HECW2Q9P2P5 1572 aa9.64□□□□□ -0.87
CNOT1-204ENST00000563130 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
CNOT1-204ENST00000563130 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
CNOT1-204ENST00000563130 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
CNOT1-204ENST00000563130 ATP10AO60312 1499 aa9.62□□□□□ -0.87
CNOT1-204ENST00000563130 ARHGEF5Q12774 1597 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 DIP2CQ9Y2E4 1556 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 SPAG9O60271 1321 aaKnown RBP9.61□□□□□ -0.87
CNOT1-204ENST00000563130 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 INO80Q9ULG1 1556 aaPredicted RBP9.61□□□□□ -0.87
CNOT1-204ENST00000563130 C9orf84Q5VXU9 1444 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 TCOF1Q13428 1488 aaKnown RBP9.61□□□□□ -0.87
CNOT1-204ENST00000563130 CCDC141Q6ZP82 1450 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 SIGLEC1Q9BZZ2 1709 aa9.61□□□□□ -0.87
CNOT1-204ENST00000563130 ABCA6Q8N139 1617 aa9.6□□□□□ -0.87
CNOT1-204ENST00000563130 RTEL1-TNFRSF6BF6WH68 1400 aa9.6□□□□□ -0.87
CNOT1-204ENST00000563130 ATP7AQ04656 1500 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms