RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MYO5CQ9NQX4 1742 aa26.79■■□□□ 1.88
CDT1-202ENST00000562747 KIF14Q15058 1648 aa26.79■■□□□ 1.88
CDT1-202ENST00000562747 MAGI2Q86UL8 1455 aa26.78■■□□□ 1.88
CDT1-202ENST00000562747 FER1L4A9Z1Z3 1794 aa26.77■■□□□ 1.88
CDT1-202ENST00000562747 LRRIQ1Q96JM4 1722 aa26.77■■□□□ 1.88
CDT1-202ENST00000562747 CLIP1P30622 1438 aa26.77■■□□□ 1.88
CDT1-202ENST00000562747 SCAPERQ9BY12 1400 aa26.77■■□□□ 1.88
CDT1-202ENST00000562747 FBXO41Q8TF61 875 aa26.75■■□□□ 1.87
CDT1-202ENST00000562747 PLPPR3Q6T4P5 718 aa26.7■■□□□ 1.86
CDT1-202ENST00000562747 HSPA2P54652 639 aa26.69■■□□□ 1.86
CDT1-202ENST00000562747 ATP1B4Q9UN42 357 aaPredicted RBP26.69■■□□□ 1.86
CDT1-202ENST00000562747 ARHGEF12Q9NZN5 1544 aa26.67■■□□□ 1.86
CDT1-202ENST00000562747 MLECQ14165 292 aa26.67■■□□□ 1.86
CDT1-202ENST00000562747 ATP10AO60312 1499 aa26.66■■□□□ 1.86
CDT1-202ENST00000562747 TROQ12816 1431 aaPredicted RBP26.65■■□□□ 1.86
CDT1-202ENST00000562747 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
CDT1-202ENST00000562747 C9orf84Q5VXU9 1444 aa26.65■■□□□ 1.86
CDT1-202ENST00000562747 LOC105371045A0A1W2PR82 267 aa26.64■■□□□ 1.86
CDT1-202ENST00000562747 CASKIN1Q8WXD9 1431 aa26.64■■□□□ 1.85
CDT1-202ENST00000562747 KDM5CP41229 1560 aa26.63■■□□□ 1.85
CDT1-202ENST00000562747 ARHGAP5Q13017 1502 aa26.63■■□□□ 1.85
CDT1-202ENST00000562747 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
CDT1-202ENST00000562747 CDC42BPBQ9Y5S2 1711 aa26.61■■□□□ 1.85
CDT1-202ENST00000562747 ZNF518AQ6AHZ1 1483 aa26.61■■□□□ 1.85
CDT1-202ENST00000562747 FYCO1Q9BQS8 1478 aa26.58■■□□□ 1.85
CDT1-202ENST00000562747 DIP2CQ9Y2E4 1556 aa26.58■■□□□ 1.85
CDT1-202ENST00000562747 PREX1Q8TCU6 1659 aa26.57■■□□□ 1.84
CDT1-202ENST00000562747 CDK11AQ9UQ88 783 aaPredicted RBP26.57■■□□□ 1.84
CDT1-202ENST00000562747 PREX2Q70Z35 1606 aa26.56■■□□□ 1.84
CDT1-202ENST00000562747 CCDC18Q5T9S5 1454 aa26.55■■□□□ 1.84
CDT1-202ENST00000562747 ABCA6Q8N139 1617 aa26.55■■□□□ 1.84
CDT1-202ENST00000562747 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
CDT1-202ENST00000562747 ABCC1P33527 1531 aa26.51■■□□□ 1.83
CDT1-202ENST00000562747 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
CDT1-202ENST00000562747 REREQ9P2R6 1566 aa26.5■■□□□ 1.83
CDT1-202ENST00000562747 CEBPAP49715 358 aaPredicted RBP26.49■■□□□ 1.83
CDT1-202ENST00000562747 CDC42BPAQ5VT25 1732 aa26.47■■□□□ 1.83
CDT1-202ENST00000562747 TRAPPC8Q9Y2L5 1435 aa26.46■■□□□ 1.83
CDT1-202ENST00000562747 MLH3Q9UHC1 1453 aa26.45■■□□□ 1.82
CDT1-202ENST00000562747 STRCQ7RTU9 1775 aa26.45■■□□□ 1.82
CDT1-202ENST00000562747 C3P01024 1663 aa26.44■■□□□ 1.82
CDT1-202ENST00000562747 KIDINS220Q9ULH0 1771 aa26.42■■□□□ 1.82
CDT1-202ENST00000562747 AGLP35573 1532 aa26.39■■□□□ 1.82
CDT1-202ENST00000562747 CERKQ8TCT0 537 aa26.39■■□□□ 1.82
CDT1-202ENST00000562747 MYT1LQ9UL68 1186 aa26.39■■□□□ 1.82
CDT1-202ENST00000562747 UHRF1BP1Q6BDS2 1440 aa26.37■■□□□ 1.81
CDT1-202ENST00000562747 SAMD9LQ8IVG5 1584 aa26.36■■□□□ 1.81
CDT1-202ENST00000562747 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
CDT1-202ENST00000562747 SETD1BQ9UPS6 1966 aaKnown RBP26.31■■□□□ 1.8
CDT1-202ENST00000562747 SYCP2Q9BX26 1530 aa26.31■■□□□ 1.8
CDT1-202ENST00000562747 GPATCH8Q9UKJ3 1502 aaKnown RBP26.28■■□□□ 1.8
CDT1-202ENST00000562747 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
CDT1-202ENST00000562747 MROH2AA6NES4 1674 aa26.24■■□□□ 1.79
CDT1-202ENST00000562747 SUPT6HQ7KZ85 1726 aaKnown RBP26.23■■□□□ 1.79
CDT1-202ENST00000562747 INO80Q9ULG1 1556 aaPredicted RBP26.23■■□□□ 1.79
CDT1-202ENST00000562747 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
CDT1-202ENST00000562747 EHBP1L1Q8N3D4 1523 aa26.22■■□□□ 1.79
CDT1-202ENST00000562747 ATP7AQ04656 1500 aa26.21■■□□□ 1.79
CDT1-202ENST00000562747 CNTLNQ9NXG0 1405 aa26.21■■□□□ 1.79
CDT1-202ENST00000562747 PLXNC1O60486 1568 aa26.2■■□□□ 1.78
CDT1-202ENST00000562747 TIAM1Q13009 1591 aa26.2■■□□□ 1.78
CDT1-202ENST00000562747 DMRT2Q9Y5R5 561 aa26.19■■□□□ 1.78
CDT1-202ENST00000562747 PTPRTO14522 1441 aa26.19■■□□□ 1.78
CDT1-202ENST00000562747 ESF1Q9H501 851 aaKnown RBP26.18■■□□□ 1.78
CDT1-202ENST00000562747 HNRNPMP52272 730 aaKnown RBP eCLIP26.17■■□□□ 1.78
CDT1-202ENST00000562747 CLTCQ00610 1675 aaKnown RBP26.16■■□□□ 1.78
CDT1-202ENST00000562747 NCOA1Q15788 1441 aa26.16■■□□□ 1.78
CDT1-202ENST00000562747 SPAG9O60271 1321 aaKnown RBP26.15■■□□□ 1.78
CDT1-202ENST00000562747 MAP3K1Q13233 1512 aa26.15■■□□□ 1.78
CDT1-202ENST00000562747 LTBP4Q8N2S1 1624 aa26.15■■□□□ 1.78
CDT1-202ENST00000562747 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
CDT1-202ENST00000562747 NPATQ14207 1427 aa26.13■■□□□ 1.77
CDT1-202ENST00000562747 PLEKHH2Q8IVE3 1493 aa26.12■■□□□ 1.77
CDT1-202ENST00000562747 CAMSAP1Q5T5Y3 1602 aa26.12■■□□□ 1.77
CDT1-202ENST00000562747 CCNB3Q8WWL7 1395 aa26.11■■□□□ 1.77
CDT1-202ENST00000562747 A2MP01023 1474 aa26.11■■□□□ 1.77
CDT1-202ENST00000562747 MYO3AQ8NEV4 1616 aa26.1■■□□□ 1.77
CDT1-202ENST00000562747 ZNF142P52746 1687 aaPredicted RBP26.1■■□□□ 1.77
CDT1-202ENST00000562747 ZMYM3Q14202 1370 aa26.09■■□□□ 1.77
CDT1-202ENST00000562747 CFDP1Q9UEE9 299 aaPredicted RBP26.09■■□□□ 1.77
CDT1-202ENST00000562747 LRRC9Q6ZRR7 1453 aa26.09■■□□□ 1.77
CDT1-202ENST00000562747 ADGBQ8N7X0 1667 aa26.08■■□□□ 1.77
CDT1-202ENST00000562747 NCOA2Q15596 1464 aa26.04■■□□□ 1.76
CDT1-202ENST00000562747 ZNF644Q9H582 1327 aaPredicted RBP26.03■■□□□ 1.76
CDT1-202ENST00000562747 PTPRKQ15262 1439 aa26.03■■□□□ 1.76
CDT1-202ENST00000562747 APLP2Q06481 763 aa26.02■■□□□ 1.76
CDT1-202ENST00000562747 MBD5Q9P267 1494 aa26.02■■□□□ 1.76
CDT1-202ENST00000562747 CEP170BQ9Y4F5 1589 aaPredicted RBP26.02■■□□□ 1.76
CDT1-202ENST00000562747 IQSEC2Q5JU85 1478 aa25.99■■□□□ 1.75
CDT1-202ENST00000562747 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
CDT1-202ENST00000562747 NCKAP5LQ9HCH0 1330 aa25.97■■□□□ 1.75
CDT1-202ENST00000562747 GGT6Q6P531 493 aa25.97■■□□□ 1.75
CDT1-202ENST00000562747 PLA2R1Q13018 1463 aa25.96■■□□□ 1.75
CDT1-202ENST00000562747 TCOF1Q13428 1488 aaKnown RBP25.95■■□□□ 1.74
CDT1-202ENST00000562747 DISP3Q9P2K9 1392 aa25.95■■□□□ 1.74
CDT1-202ENST00000562747 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
CDT1-202ENST00000562747 SPATA31D1Q6ZQQ2 1576 aa25.92■■□□□ 1.74
CDT1-202ENST00000562747 RTEL1-TNFRSF6BF6WH68 1400 aa25.92■■□□□ 1.74
CDT1-202ENST00000562747 ILDR2Q71H61 639 aa25.92■■□□□ 1.74
CDT1-202ENST00000562747 DNMT1P26358 1616 aaKnown RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms