RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PKD2Q13563 968 aa10.28□□□□□ -0.76
TCF4-216ENST00000562680 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.76
TCF4-216ENST00000562680 HNRNPMP52272 730 aaKnown RBP eCLIP10.27□□□□□ -0.767e-6■■■□□ 17
TCF4-216ENST00000562680 UACAQ9BZF9 1416 aa10.27□□□□□ -0.77
TCF4-216ENST00000562680 PHLDB1Q86UU1 1377 aa10.27□□□□□ -0.77
TCF4-216ENST00000562680 DDX10Q13206 875 aaKnown RBP10.26□□□□□ -0.77
TCF4-216ENST00000562680 KIF21AQ7Z4S6 1674 aa10.26□□□□□ -0.77
TCF4-216ENST00000562680 RGL3Q3MIN7 710 aa10.26□□□□□ -0.77
TCF4-216ENST00000562680 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
TCF4-216ENST00000562680 CYB5RLQ6IPT4 315 aa10.25□□□□□ -0.77
TCF4-216ENST00000562680 EPRSP07814 1512 aaKnown RBP10.25□□□□□ -0.77
TCF4-216ENST00000562680 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
TCF4-216ENST00000562680 CARD11Q9BXL7 1154 aa10.25□□□□□ -0.77
TCF4-216ENST00000562680 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
TCF4-216ENST00000562680 ADAMTS12P58397 1594 aa10.24□□□□□ -0.77
TCF4-216ENST00000562680 SUPT6HQ7KZ85 1726 aaKnown RBP10.23□□□□□ -0.77
TCF4-216ENST00000562680 KIF3BO15066 747 aa10.22□□□□□ -0.77
TCF4-216ENST00000562680 DHX57Q6P158 1386 aaKnown RBP10.22□□□□□ -0.77
TCF4-216ENST00000562680 PCF11O94913 1555 aaKnown RBP10.22□□□□□ -0.77
TCF4-216ENST00000562680 GGT6Q6P531 493 aa10.21□□□□□ -0.77
TCF4-216ENST00000562680 UGGT2Q9NYU1 1516 aa10.2□□□□□ -0.78
TCF4-216ENST00000562680 ARHGAP5Q13017 1502 aa10.19□□□□□ -0.78
TCF4-216ENST00000562680 KIF15Q9NS87 1388 aa10.19□□□□□ -0.78
TCF4-216ENST00000562680 ABCA5Q8WWZ7 1642 aa10.19□□□□□ -0.78
TCF4-216ENST00000562680 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
TCF4-216ENST00000562680 CTTNBP2Q8WZ74 1663 aa10.19□□□□□ -0.78
TCF4-216ENST00000562680 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
TCF4-216ENST00000562680 EIF4G3O43432 1585 aaKnown RBP10.18□□□□□ -0.78
TCF4-216ENST00000562680 TMC1Q8TDI8 760 aa10.18□□□□□ -0.78
TCF4-216ENST00000562680 PLPPR3Q6T4P5 718 aa10.18□□□□□ -0.78
TCF4-216ENST00000562680 ANKRD50Q9ULJ7 1429 aa10.17□□□□□ -0.78
TCF4-216ENST00000562680 CCDC144AA2RUR9 1427 aa10.16□□□□□ -0.78
TCF4-216ENST00000562680 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
TCF4-216ENST00000562680 TMF1P82094 1093 aa10.16□□□□□ -0.78
TCF4-216ENST00000562680 NUP160Q12769 1436 aa10.15□□□□□ -0.78
TCF4-216ENST00000562680 HFM1A2PYH4 1435 aa10.15□□□□□ -0.79
TCF4-216ENST00000562680 FAM69CQ0P6D2 419 aa10.15□□□□□ -0.79
TCF4-216ENST00000562680 ROCK1Q13464 1354 aa10.15□□□□□ -0.79
TCF4-216ENST00000562680 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
TCF4-216ENST00000562680 RTL5Q5HYW3 569 aaPredicted RBP10.14□□□□□ -0.79
TCF4-216ENST00000562680 MRS2Q9HD23 443 aa10.14□□□□□ -0.79
TCF4-216ENST00000562680 PLB1Q6P1J6 1458 aa10.14□□□□□ -0.79
TCF4-216ENST00000562680 KIF14Q15058 1648 aa10.14□□□□□ -0.79
TCF4-216ENST00000562680 EIF3AQ14152 1382 aaKnown RBP10.14□□□□□ -0.79
TCF4-216ENST00000562680 PODXL2Q9NZ53 605 aa10.14□□□□□ -0.79
TCF4-216ENST00000562680 ZNF644Q9H582 1327 aaPredicted RBP10.13□□□□□ -0.79
TCF4-216ENST00000562680 KNSTRNQ9Y448 316 aa10.13□□□□□ -0.79
TCF4-216ENST00000562680 C9orf84Q5VXU9 1444 aa10.13□□□□□ -0.79
TCF4-216ENST00000562680 WDR43Q15061 677 aaKnown RBP eCLIP10.13□□□□□ -0.79
TCF4-216ENST00000562680 PBRM1Q86U86 1689 aa10.13□□□□□ -0.79
TCF4-216ENST00000562680 POGKQ9P215 609 aa10.12□□□□□ -0.79
TCF4-216ENST00000562680 MLECQ14165 292 aa10.12□□□□□ -0.79
TCF4-216ENST00000562680 TARBP1Q13395 1621 aaKnown RBP10.12□□□□□ -0.79
TCF4-216ENST00000562680 L3MBTL2Q969R5 705 aa10.12□□□□□ -0.79
TCF4-216ENST00000562680 RAPGEF6Q8TEU7 1601 aa10.11□□□□□ -0.79
TCF4-216ENST00000562680 DAPK1P53355 1430 aa10.11□□□□□ -0.79
TCF4-216ENST00000562680 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
TCF4-216ENST00000562680 HNRNPUQ00839 825 aaKnown RBP eCLIP10.1□□□□□ -0.79
TCF4-216ENST00000562680 FOXD1Q16676 465 aa10.1□□□□□ -0.79
TCF4-216ENST00000562680 ROCK2O75116 1388 aaKnown RBP10.1□□□□□ -0.79
TCF4-216ENST00000562680 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
TCF4-216ENST00000562680 HIRIP3Q9BW71 556 aaPredicted RBP10.1□□□□□ -0.79
TCF4-216ENST00000562680 CCDC141Q6ZP82 1450 aa10.09□□□□□ -0.79
TCF4-216ENST00000562680 HSPA5P11021 654 aaKnown RBP10.09□□□□□ -0.79
TCF4-216ENST00000562680 MIER1Q8N108 512 aa10.09□□□□□ -0.79
TCF4-216ENST00000562680 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
TCF4-216ENST00000562680 AKNAQ7Z591 1439 aa10.07□□□□□ -0.8
TCF4-216ENST00000562680 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
TCF4-216ENST00000562680 CANXP27824 592 aaKnown RBP10.06□□□□□ -0.8
TCF4-216ENST00000562680 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
TCF4-216ENST00000562680 VGFO15240 615 aaPredicted RBP10.06□□□□□ -0.8
TCF4-216ENST00000562680 C14orf37Q86TY3 774 aa10.06□□□□□ -0.8
TCF4-216ENST00000562680 CAMSAP2Q08AD1 1489 aa10.05□□□□□ -0.8
TCF4-216ENST00000562680 SCAPERQ9BY12 1400 aa10.05□□□□□ -0.8
TCF4-216ENST00000562680 ARHGEF11O15085 1522 aa10.05□□□□□ -0.8
TCF4-216ENST00000562680 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
TCF4-216ENST00000562680 EID1Q9Y6B2 187 aa10.05□□□□□ -0.8
TCF4-216ENST00000562680 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
TCF4-216ENST00000562680 CD109Q6YHK3 1445 aa10.04□□□□□ -0.8
TCF4-216ENST00000562680 ATP10BO94823 1461 aa10.04□□□□□ -0.8
TCF4-216ENST00000562680 NAIPQ13075 1403 aa10.04□□□□□ -0.8
TCF4-216ENST00000562680 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.03□□□□□ -0.8
TCF4-216ENST00000562680 KIAA1107Q9UPP5 1409 aa10.03□□□□□ -0.8
TCF4-216ENST00000562680 SAMD9Q5K651 1589 aa10.03□□□□□ -0.8
TCF4-216ENST00000562680 CFAP43Q8NDM7 1665 aa10.03□□□□□ -0.8
TCF4-216ENST00000562680 ZBTB47Q9UFB7 747 aaPredicted RBP10.02□□□□□ -0.8
TCF4-216ENST00000562680 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.8
TCF4-216ENST00000562680 NUDCQ9Y266 331 aa10.02□□□□□ -0.81
TCF4-216ENST00000562680 ABCC5O15440 1437 aa10.02□□□□□ -0.81
TCF4-216ENST00000562680 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
TCF4-216ENST00000562680 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
TCF4-216ENST00000562680 GPATCH8Q9UKJ3 1502 aaKnown RBP10□□□□□ -0.81
TCF4-216ENST00000562680 ADGRL1O94910 1474 aa10□□□□□ -0.81
TCF4-216ENST00000562680 ABCC2Q92887 1545 aa10□□□□□ -0.81
TCF4-216ENST00000562680 RALBP1Q15311 655 aa10□□□□□ -0.81
TCF4-216ENST00000562680 KTN1Q86UP2 1357 aaKnown RBP10□□□□□ -0.81
TCF4-216ENST00000562680 HDGFL2Q7Z4V5 671 aaPredicted RBP9.99□□□□□ -0.81
TCF4-216ENST00000562680 PNNQ9H307 717 aaKnown RBP9.99□□□□□ -0.81
TCF4-216ENST00000562680 SRPK2P78362 688 aaKnown RBP9.99□□□□□ -0.81
TCF4-216ENST00000562680 PLCH2O75038 1416 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms