RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 ZRANB1Q9UGI0 708 aa6.72□□□□□ -1.33
TCF4-215ENST00000562638 PPM1GO15355 546 aaPredicted RBP6.7□□□□□ -1.34
TCF4-215ENST00000562638 GALR2O43603 387 aaPredicted RBP6.69□□□□□ -1.34
TCF4-215ENST00000562638 TICAM2Q86XR7 235 aa6.69□□□□□ -1.34
TCF4-215ENST00000562638 STAG3Q9UJ98 1225 aa6.69□□□□□ -1.34
TCF4-215ENST00000562638 MMP14P50281 582 aa6.68□□□□□ -1.34
TCF4-215ENST00000562638 CNGB1Q14028 1251 aaPredicted RBP6.68□□□□□ -1.34
TCF4-215ENST00000562638 TMEM132AQ24JP5 1023 aa6.68□□□□□ -1.34
TCF4-215ENST00000562638 GRIPAP1Q4V328 841 aa6.68□□□□□ -1.34
TCF4-215ENST00000562638 BRPF3Q9ULD4 1205 aa6.68□□□□□ -1.34
TCF4-215ENST00000562638 SHROOM4Q9ULL8 1493 aa6.67□□□□□ -1.34
TCF4-215ENST00000562638 PAK3O75914 559 aaPredicted RBP6.67□□□□□ -1.34
TCF4-215ENST00000562638 HMGB1P09429 215 aaKnown RBP6.67□□□□□ -1.34
TCF4-215ENST00000562638 NCLP19338 710 aaKnown RBP6.67□□□□□ -1.34
TCF4-215ENST00000562638 FKBP8Q14318 412 aa6.66□□□□□ -1.34
TCF4-215ENST00000562638 NBR1Q14596 966 aa6.66□□□□□ -1.34
TCF4-215ENST00000562638 POTEB2H3BUK9 544 aa6.65□□□□□ -1.34
TCF4-215ENST00000562638 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.34
TCF4-215ENST00000562638 PDCL3Q9H2J4 239 aa6.65□□□□□ -1.34
TCF4-215ENST00000562638 SPDYE4A6NLX3 237 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 RGS3P49796 1198 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 RGS22Q8NE09 1264 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 OTUD5Q96G74 571 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 TMEM51Q9NW97 253 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 KCNG1Q9UIX4 513 aa6.64□□□□□ -1.35
TCF4-215ENST00000562638 MNX1P50219 401 aaPredicted RBP6.63□□□□□ -1.35
TCF4-215ENST00000562638 UTP14CQ5TAP6 766 aaKnown RBP6.63□□□□□ -1.35
TCF4-215ENST00000562638 CNPY4Q8N129 248 aa6.63□□□□□ -1.35
TCF4-215ENST00000562638 ZNF830Q96NB3 372 aaPredicted RBP6.63□□□□□ -1.35
TCF4-215ENST00000562638 IRX6P78412 446 aaPredicted RBP6.62□□□□□ -1.35
TCF4-215ENST00000562638 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
TCF4-215ENST00000562638 PHF12Q96QT6 1004 aa6.62□□□□□ -1.35
TCF4-215ENST00000562638 CCDC9Q9Y3X0 531 aaKnown RBP6.62□□□□□ -1.35
TCF4-215ENST00000562638 IPO9Q96P70 1041 aaKnown RBP6.61□□□□□ -1.35
TCF4-215ENST00000562638 PUS7Q96PZ0 661 aaKnown RBP6.61□□□□□ -1.35
TCF4-215ENST00000562638 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.61□□□□□ -1.35
TCF4-215ENST00000562638 IGSF3O75054 1194 aa6.6□□□□□ -1.35
TCF4-215ENST00000562638 NEFMP07197 916 aa6.6□□□□□ -1.35
TCF4-215ENST00000562638 CLSTN1O94985 981 aa6.59□□□□□ -1.35
TCF4-215ENST00000562638 CLGNO14967 610 aa6.58□□□□□ -1.36
TCF4-215ENST00000562638 MCCP23508 829 aa6.58□□□□□ -1.36
TCF4-215ENST00000562638 GSE1Q14687 1217 aa6.58□□□□□ -1.36
TCF4-215ENST00000562638 PLSCR2Q9NRY7 297 aa6.58□□□□□ -1.36
TCF4-215ENST00000562638 NPM1P06748 294 aaKnown RBP eCLIP6.57□□□□□ -1.36
TCF4-215ENST00000562638 RRAGDQ9NQL2 400 aaPredicted RBP6.57□□□□□ -1.36
TCF4-215ENST00000562638 PTMAP06454 111 aaKnown RBP6.56□□□□□ -1.36
TCF4-215ENST00000562638 TPM2P07951 284 aa6.56□□□□□ -1.36
TCF4-215ENST00000562638 CLCN1P35523 988 aa6.56□□□□□ -1.36
TCF4-215ENST00000562638 WWC1Q8IX03 1113 aa6.56□□□□□ -1.36
TCF4-215ENST00000562638 ZNF622Q969S3 477 aaKnown RBP eCLIP6.56□□□□□ -1.36
TCF4-215ENST00000562638 PSEN1P49768 467 aa6.55□□□□□ -1.36
TCF4-215ENST00000562638 SLC20A2Q08357 652 aa6.55□□□□□ -1.36
TCF4-215ENST00000562638 PHF14O94880 888 aa6.54□□□□□ -1.36
TCF4-215ENST00000562638 POTEJP0CG39 1038 aa6.54□□□□□ -1.36
TCF4-215ENST00000562638 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
TCF4-215ENST00000562638 ANP32BQ92688 251 aaKnown RBP6.54□□□□□ -1.36
TCF4-215ENST00000562638 MAP7D2Q96T17 732 aa6.54□□□□□ -1.36
TCF4-215ENST00000562638 ITGAEP38570 1179 aa6.53□□□□□ -1.36
TCF4-215ENST00000562638 ATMINO43313 823 aaPredicted RBP6.52□□□□□ -1.37
TCF4-215ENST00000562638 UBTFP17480 764 aaKnown RBP6.52□□□□□ -1.37
TCF4-215ENST00000562638 FAM193AP78312 1265 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 IRX3P78415 501 aaPredicted RBP6.52□□□□□ -1.37
TCF4-215ENST00000562638 DMTNQ08495 405 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 ASTLQ6HA08 431 aaPredicted RBP6.52□□□□□ -1.37
TCF4-215ENST00000562638 MS4A3Q96HJ5 214 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 PLCD4Q9BRC7 762 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 PRDM10Q9NQV6 1147 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 SLC52A1Q9NWF4 448 aa6.52□□□□□ -1.37
TCF4-215ENST00000562638 ZBTB47Q9UFB7 747 aaPredicted RBP6.52□□□□□ -1.37
TCF4-215ENST00000562638 SETQ01105 290 aaPredicted RBP6.51□□□□□ -1.37
TCF4-215ENST00000562638 POLR3GLQ9BT43 218 aa6.51□□□□□ -1.37
TCF4-215ENST00000562638 NCAPD3P42695 1498 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 KIF20AO95235 890 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 ANP32AP39687 249 aaKnown RBP6.5□□□□□ -1.37
TCF4-215ENST00000562638 PPP4R3BQ5MIZ7 849 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 TMED8Q6PL24 325 aaPredicted RBP6.5□□□□□ -1.37
TCF4-215ENST00000562638 CEP120Q8N960 986 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 DCAF11Q8TEB1 546 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 ZNF592Q92610 1267 aa6.5□□□□□ -1.37
TCF4-215ENST00000562638 PNNQ9H307 717 aaKnown RBP6.5□□□□□ -1.37
TCF4-215ENST00000562638 POTEMA6NI47 508 aa6.49□□□□□ -1.37
TCF4-215ENST00000562638 TERF1P54274 439 aa6.49□□□□□ -1.37
TCF4-215ENST00000562638 FAM43BQ6ZT52 329 aaPredicted RBP6.49□□□□□ -1.37
TCF4-215ENST00000562638 PLCD3Q8N3E9 789 aa6.49□□□□□ -1.37
TCF4-215ENST00000562638 METRNQ9UJH8 293 aa6.49□□□□□ -1.37
TCF4-215ENST00000562638 C7P10643 843 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 PLCB2Q00722 1185 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 PROM2Q8N271 834 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 FRAT1Q92837 279 aaPredicted RBP6.48□□□□□ -1.37
TCF4-215ENST00000562638 TSPYL2Q9H2G4 693 aaPredicted RBP6.48□□□□□ -1.37
TCF4-215ENST00000562638 YY1AP1Q9H869 796 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 PPP4R2Q9NY27 417 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 HDAC5Q9UQL6 1122 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 EEA1Q15075 1411 aa6.48□□□□□ -1.37
TCF4-215ENST00000562638 CC2D2BQ6DHV5 1058 aa6.47□□□□□ -1.37
TCF4-215ENST00000562638 POTEGQ6S5H5 508 aa6.47□□□□□ -1.37
TCF4-215ENST00000562638 SLC39A7Q92504 469 aa6.47□□□□□ -1.37
TCF4-215ENST00000562638 TRIM44Q96DX7 344 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms