RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 PLCH2O75038 1416 aa17.12■□□□□ 0.33
BBS4-205ENST00000562219 FBXO41Q8TF61 875 aa17.1■□□□□ 0.33
BBS4-205ENST00000562219 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
BBS4-205ENST00000562219 SCAPERQ9BY12 1400 aa17.09■□□□□ 0.33
BBS4-205ENST00000562219 C9orf84Q5VXU9 1444 aa17.05■□□□□ 0.32
BBS4-205ENST00000562219 PREX1Q8TCU6 1659 aa17.05■□□□□ 0.32
BBS4-205ENST00000562219 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
BBS4-205ENST00000562219 KDM5CP41229 1560 aa17.05■□□□□ 0.32
BBS4-205ENST00000562219 ARHGEF12Q9NZN5 1544 aa17.05■□□□□ 0.32
BBS4-205ENST00000562219 CDC42BPBQ9Y5S2 1711 aa17.04■□□□□ 0.32
BBS4-205ENST00000562219 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
BBS4-205ENST00000562219 ATP10AO60312 1499 aa17.04■□□□□ 0.32
BBS4-205ENST00000562219 ZNF518AQ6AHZ1 1483 aa17.04■□□□□ 0.32
BBS4-205ENST00000562219 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
BBS4-205ENST00000562219 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
BBS4-205ENST00000562219 ATP1B4Q9UN42 357 aaPredicted RBP17.02■□□□□ 0.32
BBS4-205ENST00000562219 CLIP1P30622 1438 aa17.02■□□□□ 0.31
BBS4-205ENST00000562219 PREX2Q70Z35 1606 aa17.01■□□□□ 0.31
BBS4-205ENST00000562219 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
BBS4-205ENST00000562219 EHMT2Q96KQ7 1210 aa17.01■□□□□ 0.31
BBS4-205ENST00000562219 HSPA2P54652 639 aa17■□□□□ 0.31
BBS4-205ENST00000562219 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
BBS4-205ENST00000562219 DIP2CQ9Y2E4 1556 aa16.99■□□□□ 0.31
BBS4-205ENST00000562219 MLECQ14165 292 aa16.99■□□□□ 0.31
BBS4-205ENST00000562219 REREQ9P2R6 1566 aa16.98■□□□□ 0.31
BBS4-205ENST00000562219 ITSN2Q9NZM3 1697 aa16.98■□□□□ 0.31
BBS4-205ENST00000562219 ABCA6Q8N139 1617 aa16.98■□□□□ 0.31
BBS4-205ENST00000562219 CDC42BPAQ5VT25 1732 aa16.96■□□□□ 0.31
BBS4-205ENST00000562219 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
BBS4-205ENST00000562219 SETD1BQ9UPS6 1966 aaKnown RBP16.96■□□□□ 0.31
BBS4-205ENST00000562219 ABCC1P33527 1531 aa16.96■□□□□ 0.3
BBS4-205ENST00000562219 C3P01024 1663 aa16.94■□□□□ 0.3
BBS4-205ENST00000562219 STRCQ7RTU9 1775 aa16.93■□□□□ 0.3
BBS4-205ENST00000562219 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
BBS4-205ENST00000562219 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
BBS4-205ENST00000562219 MLH3Q9UHC1 1453 aa16.92■□□□□ 0.3
BBS4-205ENST00000562219 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
BBS4-205ENST00000562219 KIDINS220Q9ULH0 1771 aa16.91■□□□□ 0.3
BBS4-205ENST00000562219 AGLP35573 1532 aa16.89■□□□□ 0.29
BBS4-205ENST00000562219 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
BBS4-205ENST00000562219 UHRF1BP1Q6BDS2 1440 aa16.87■□□□□ 0.29
BBS4-205ENST00000562219 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
BBS4-205ENST00000562219 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
BBS4-205ENST00000562219 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
BBS4-205ENST00000562219 CERKQ8TCT0 537 aa16.85■□□□□ 0.29
BBS4-205ENST00000562219 SAMD9LQ8IVG5 1584 aa16.85■□□□□ 0.29
BBS4-205ENST00000562219 MROH2AA6NES4 1674 aa16.84■□□□□ 0.29
BBS4-205ENST00000562219 SYCP2Q9BX26 1530 aa16.81■□□□□ 0.28
BBS4-205ENST00000562219 SUPT6HQ7KZ85 1726 aaKnown RBP16.81■□□□□ 0.28
BBS4-205ENST00000562219 CNTLNQ9NXG0 1405 aa16.79■□□□□ 0.28
BBS4-205ENST00000562219 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
BBS4-205ENST00000562219 INO80Q9ULG1 1556 aaPredicted RBP16.79■□□□□ 0.28
BBS4-205ENST00000562219 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
BBS4-205ENST00000562219 ATP7AQ04656 1500 aa16.77■□□□□ 0.28
BBS4-205ENST00000562219 GPATCH8Q9UKJ3 1502 aaKnown RBP16.77■□□□□ 0.28
BBS4-205ENST00000562219 PLXNC1O60486 1568 aa16.77■□□□□ 0.27
BBS4-205ENST00000562219 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
BBS4-205ENST00000562219 PTPRTO14522 1441 aa16.75■□□□□ 0.27
BBS4-205ENST00000562219 PLEKHH2Q8IVE3 1493 aa16.74■□□□□ 0.27
BBS4-205ENST00000562219 ZNF142P52746 1687 aaPredicted RBP16.74■□□□□ 0.27
BBS4-205ENST00000562219 ADGBQ8N7X0 1667 aa16.74■□□□□ 0.27
BBS4-205ENST00000562219 NPATQ14207 1427 aa16.73■□□□□ 0.27
BBS4-205ENST00000562219 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
BBS4-205ENST00000562219 KIAA1107Q9UPP5 1409 aa16.72■□□□□ 0.27
BBS4-205ENST00000562219 MYO3AQ8NEV4 1616 aa16.72■□□□□ 0.27
BBS4-205ENST00000562219 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
BBS4-205ENST00000562219 NCOA1Q15788 1441 aa16.71■□□□□ 0.27
BBS4-205ENST00000562219 CAMSAP1Q5T5Y3 1602 aa16.7■□□□□ 0.26
BBS4-205ENST00000562219 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
BBS4-205ENST00000562219 TIAM1Q13009 1591 aa16.69■□□□□ 0.26
BBS4-205ENST00000562219 CCNB3Q8WWL7 1395 aa16.69■□□□□ 0.26
BBS4-205ENST00000562219 A2MP01023 1474 aa16.68■□□□□ 0.26
BBS4-205ENST00000562219 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
BBS4-205ENST00000562219 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
BBS4-205ENST00000562219 HNRNPMP52272 730 aaKnown RBP eCLIP16.67■□□□□ 0.26
BBS4-205ENST00000562219 CFDP1Q9UEE9 299 aaPredicted RBP16.67■□□□□ 0.26
BBS4-205ENST00000562219 IQSEC2Q5JU85 1478 aa16.67■□□□□ 0.26
BBS4-205ENST00000562219 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
BBS4-205ENST00000562219 CEP170BQ9Y4F5 1589 aaPredicted RBP16.66■□□□□ 0.26
BBS4-205ENST00000562219 PLA2R1Q13018 1463 aa16.62■□□□□ 0.25
BBS4-205ENST00000562219 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
BBS4-205ENST00000562219 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
BBS4-205ENST00000562219 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
BBS4-205ENST00000562219 CEP162Q5TB80 1403 aa16.6■□□□□ 0.25
BBS4-205ENST00000562219 POLR1AO95602 1720 aaPredicted RBP16.59■□□□□ 0.25
BBS4-205ENST00000562219 DISP3Q9P2K9 1392 aa16.58■□□□□ 0.24
BBS4-205ENST00000562219 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
BBS4-205ENST00000562219 TCOF1Q13428 1488 aaKnown RBP16.58■□□□□ 0.24
BBS4-205ENST00000562219 ZNF644Q9H582 1327 aaPredicted RBP16.57■□□□□ 0.24
BBS4-205ENST00000562219 GGT6Q6P531 493 aa16.57■□□□□ 0.24
BBS4-205ENST00000562219 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
BBS4-205ENST00000562219 DNMT1P26358 1616 aaKnown RBP16.56■□□□□ 0.24
BBS4-205ENST00000562219 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
BBS4-205ENST00000562219 A2ML1A8K2U0 1454 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 NCKAP5LQ9HCH0 1330 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 PKD2Q13563 968 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
BBS4-205ENST00000562219 NCOA2Q15596 1464 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms