RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 P3H3Q8IVL6 736 aa13.55□□□□□ -0.24
TCF4-211ENST00000561992 MIA2Q96PC5 1412 aa13.54□□□□□ -0.24
TCF4-211ENST00000561992 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
TCF4-211ENST00000561992 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
TCF4-211ENST00000561992 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.24
TCF4-211ENST00000561992 LRRIQ1Q96JM4 1722 aa13.51□□□□□ -0.25
TCF4-211ENST00000561992 DENND4BO75064 1496 aaPredicted RBP13.5□□□□□ -0.25
TCF4-211ENST00000561992 SMG6Q86US8 1419 aaKnown RBP13.5□□□□□ -0.25
TCF4-211ENST00000561992 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
TCF4-211ENST00000561992 ROCK1Q13464 1354 aa13.49□□□□□ -0.25
TCF4-211ENST00000561992 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
TCF4-211ENST00000561992 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
TCF4-211ENST00000561992 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
TCF4-211ENST00000561992 SPATA31E1Q6ZUB1 1445 aa13.46□□□□□ -0.25
TCF4-211ENST00000561992 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
TCF4-211ENST00000561992 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
TCF4-211ENST00000561992 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
TCF4-211ENST00000561992 IRX6P78412 446 aaPredicted RBP13.45□□□□□ -0.26
TCF4-211ENST00000561992 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
TCF4-211ENST00000561992 TEX14Q8IWB6 1497 aa13.44□□□□□ -0.26
TCF4-211ENST00000561992 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
TCF4-211ENST00000561992 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
TCF4-211ENST00000561992 ANKRD30BQ9BXX2 1392 aa13.43□□□□□ -0.26
TCF4-211ENST00000561992 DEKP35659 375 aaKnown RBP13.42□□□□□ -0.26
TCF4-211ENST00000561992 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
TCF4-211ENST00000561992 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
TCF4-211ENST00000561992 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
TCF4-211ENST00000561992 NUDCQ9Y266 331 aa13.4□□□□□ -0.26
TCF4-211ENST00000561992 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 EPRSP07814 1512 aaKnown RBP13.39□□□□□ -0.27
TCF4-211ENST00000561992 NESP48681 1621 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 FAM9BQ8IZU0 186 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 KIF7Q2M1P5 1343 aa13.39□□□□□ -0.27
TCF4-211ENST00000561992 ANP32AP39687 249 aaKnown RBP13.38□□□□□ -0.27
TCF4-211ENST00000561992 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
TCF4-211ENST00000561992 ROCK2O75116 1388 aaKnown RBP13.38□□□□□ -0.27
TCF4-211ENST00000561992 KDM6BO15054 1643 aa13.38□□□□□ -0.27
TCF4-211ENST00000561992 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
TCF4-211ENST00000561992 KTN1Q86UP2 1357 aaKnown RBP13.37□□□□□ -0.27
TCF4-211ENST00000561992 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
TCF4-211ENST00000561992 C11orf95C9JLR9 678 aaPredicted RBP13.37□□□□□ -0.27
TCF4-211ENST00000561992 IPO9Q96P70 1041 aaKnown RBP13.37□□□□□ -0.27
TCF4-211ENST00000561992 DAPK1P53355 1430 aa13.35□□□□□ -0.27
TCF4-211ENST00000561992 MBD5Q9P267 1494 aa13.35□□□□□ -0.27
TCF4-211ENST00000561992 DHX29Q7Z478 1369 aaKnown RBP13.35□□□□□ -0.27
TCF4-211ENST00000561992 WDR62O43379 1518 aa13.35□□□□□ -0.27
TCF4-211ENST00000561992 URB2Q14146 1524 aaKnown RBP13.35□□□□□ -0.27
TCF4-211ENST00000561992 CCDC136Q96JN2 1154 aa13.33□□□□□ -0.28
TCF4-211ENST00000561992 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
TCF4-211ENST00000561992 KIF14Q15058 1648 aa13.32□□□□□ -0.28
TCF4-211ENST00000561992 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
TCF4-211ENST00000561992 RTL5Q5HYW3 569 aaPredicted RBP13.31□□□□□ -0.28
TCF4-211ENST00000561992 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
TCF4-211ENST00000561992 CHIC2Q9UKJ5 165 aa13.31□□□□□ -0.28
TCF4-211ENST00000561992 ABCC5O15440 1437 aa13.3□□□□□ -0.28
TCF4-211ENST00000561992 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
TCF4-211ENST00000561992 UHRF1BP1Q6BDS2 1440 aa13.29□□□□□ -0.28
TCF4-211ENST00000561992 TCERG1O14776 1098 aaKnown RBP13.28□□□□□ -0.28
TCF4-211ENST00000561992 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.28
TCF4-211ENST00000561992 TDRD9Q8NDG6 1382 aaKnown RBP13.27□□□□□ -0.28
TCF4-211ENST00000561992 KDM5CP41229 1560 aa13.27□□□□□ -0.28
TCF4-211ENST00000561992 ADGRL2O95490 1459 aa13.27□□□□□ -0.28
TCF4-211ENST00000561992 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
TCF4-211ENST00000561992 KIAA1107Q9UPP5 1409 aa13.27□□□□□ -0.29
TCF4-211ENST00000561992 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
TCF4-211ENST00000561992 PZPP20742 1482 aa13.27□□□□□ -0.29
TCF4-211ENST00000561992 INSRP06213 1382 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 USP47Q96K76 1375 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 ARHGEF12Q9NZN5 1544 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 TARBP1Q13395 1621 aaKnown RBP13.26□□□□□ -0.29
TCF4-211ENST00000561992 PAK3O75914 559 aaPredicted RBP13.26□□□□□ -0.29
TCF4-211ENST00000561992 MS4A1P11836 297 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
TCF4-211ENST00000561992 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
TCF4-211ENST00000561992 CDK13Q14004 1512 aaKnown RBP13.25□□□□□ -0.29
TCF4-211ENST00000561992 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
TCF4-211ENST00000561992 PDE3BQ13370 1112 aa13.24□□□□□ -0.29
TCF4-211ENST00000561992 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
TCF4-211ENST00000561992 RALBP1Q15311 655 aa13.24□□□□□ -0.29
TCF4-211ENST00000561992 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
TCF4-211ENST00000561992 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
TCF4-211ENST00000561992 ITSN2Q9NZM3 1697 aa13.23□□□□□ -0.29
TCF4-211ENST00000561992 NBR1Q14596 966 aa13.21□□□□□ -0.29
TCF4-211ENST00000561992 TMC1Q8TDI8 760 aa13.21□□□□□ -0.3
TCF4-211ENST00000561992 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.3
TCF4-211ENST00000561992 FOXD1Q16676 465 aa13.2□□□□□ -0.3
TCF4-211ENST00000561992 PPM1GO15355 546 aaPredicted RBP13.2□□□□□ -0.3
TCF4-211ENST00000561992 RRP1P56182 461 aaKnown RBP13.2□□□□□ -0.3
TCF4-211ENST00000561992 CROCC2H7BZ55 1655 aa13.19□□□□□ -0.3
TCF4-211ENST00000561992 KDM5DQ9BY66 1539 aa13.18□□□□□ -0.3
TCF4-211ENST00000561992 ADCY10Q96PN6 1610 aa13.18□□□□□ -0.3
TCF4-211ENST00000561992 E9PCH4 1651 aa13.18□□□□□ -0.3
TCF4-211ENST00000561992 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
TCF4-211ENST00000561992 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
TCF4-211ENST00000561992 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
TCF4-211ENST00000561992 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms