RNA–Protein interactions for RNA: ENST00000561437.1

PPP1R3E-209, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 2

Gene PPP1R3E, Length 690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-209ENST00000561437 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
PPP1R3E-209ENST00000561437 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
PPP1R3E-209ENST00000561437 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
PPP1R3E-209ENST00000561437 ITGAEP38570 1179 aa25.25■■□□□ 1.63
PPP1R3E-209ENST00000561437 SETD5Q9C0A6 1442 aa25.23■■□□□ 1.63
PPP1R3E-209ENST00000561437 AKNAQ7Z591 1439 aa25.2■■□□□ 1.62
PPP1R3E-209ENST00000561437 CLSPNQ9HAW4 1339 aa25.19■■□□□ 1.62
PPP1R3E-209ENST00000561437 CDC42BPAQ5VT25 1732 aa25.17■■□□□ 1.62
PPP1R3E-209ENST00000561437 RSPH4AQ5TD94 716 aa25.17■■□□□ 1.62
PPP1R3E-209ENST00000561437 ADGRL1O94910 1474 aa25.16■■□□□ 1.62
PPP1R3E-209ENST00000561437 WDR7Q9Y4E6 1490 aa25.15■■□□□ 1.62
PPP1R3E-209ENST00000561437 DNMT1P26358 1616 aaKnown RBP25.15■■□□□ 1.62
PPP1R3E-209ENST00000561437 CAMSAP2Q08AD1 1489 aa25.15■■□□□ 1.62
PPP1R3E-209ENST00000561437 HFM1A2PYH4 1435 aa25.14■■□□□ 1.62
PPP1R3E-209ENST00000561437 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
PPP1R3E-209ENST00000561437 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
PPP1R3E-209ENST00000561437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
PPP1R3E-209ENST00000561437 PLEKHH2Q8IVE3 1493 aa25.12■■□□□ 1.61
PPP1R3E-209ENST00000561437 DAPK1P53355 1430 aa25.12■■□□□ 1.61
PPP1R3E-209ENST00000561437 MYO5CQ9NQX4 1742 aa25.11■■□□□ 1.61
PPP1R3E-209ENST00000561437 ARAP3Q8WWN8 1544 aa25.11■■□□□ 1.61
PPP1R3E-209ENST00000561437 RAB3GAP2Q9H2M9 1393 aa25.1■■□□□ 1.61
PPP1R3E-209ENST00000561437 HECW2Q9P2P5 1572 aa25.09■■□□□ 1.61
PPP1R3E-209ENST00000561437 PLCH2O75038 1416 aa25.06■■□□□ 1.6
PPP1R3E-209ENST00000561437 KCNH8Q96L42 1107 aa25.06■■□□□ 1.6
PPP1R3E-209ENST00000561437 ABCC5O15440 1437 aa25.05■■□□□ 1.6
PPP1R3E-209ENST00000561437 ZNF777Q9ULD5 760 aaPredicted RBP25.05■■□□□ 1.6
PPP1R3E-209ENST00000561437 ARHGAP5Q13017 1502 aa25.05■■□□□ 1.6
PPP1R3E-209ENST00000561437 ARHGEF5Q12774 1597 aa25.05■■□□□ 1.6
PPP1R3E-209ENST00000561437 TTC37Q6PGP7 1564 aa25.05■■□□□ 1.6
PPP1R3E-209ENST00000561437 PTPRKQ15262 1439 aa25.04■■□□□ 1.6
PPP1R3E-209ENST00000561437 ASXL2Q76L83 1435 aa25.04■■□□□ 1.6
PPP1R3E-209ENST00000561437 SHANK2Q9UPX8 1470 aa25.04■■□□□ 1.6
PPP1R3E-209ENST00000561437 EFCAB2Q5VUJ9 269 aa25.04■■□□□ 1.6
PPP1R3E-209ENST00000561437 CDC42BPBQ9Y5S2 1711 aa25.03■■□□□ 1.6
PPP1R3E-209ENST00000561437 PPRC1Q5VV67 1664 aaKnown RBP25.03■■□□□ 1.6
PPP1R3E-209ENST00000561437 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
PPP1R3E-209ENST00000561437 GCC2Q8IWJ2 1684 aa25.02■■□□□ 1.6
PPP1R3E-209ENST00000561437 NAIPQ13075 1403 aa25.02■■□□□ 1.6
PPP1R3E-209ENST00000561437 TSPY4P0CV99 314 aa25.01■■□□□ 1.59
PPP1R3E-209ENST00000561437 TSPY10P0CW01 314 aa25.01■■□□□ 1.59
PPP1R3E-209ENST00000561437 ABCA9Q8IUA7 1624 aa25.01■■□□□ 1.59
PPP1R3E-209ENST00000561437 ZNF644Q9H582 1327 aaPredicted RBP25■■□□□ 1.59
PPP1R3E-209ENST00000561437 DHX57Q6P158 1386 aaKnown RBP25■■□□□ 1.59
PPP1R3E-209ENST00000561437 CROCC2H7BZ55 1655 aa24.99■■□□□ 1.59
PPP1R3E-209ENST00000561437 ADGRL2O95490 1459 aa24.99■■□□□ 1.59
PPP1R3E-209ENST00000561437 GLI2P10070 1586 aa24.99■■□□□ 1.59
PPP1R3E-209ENST00000561437 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
PPP1R3E-209ENST00000561437 ANKRD30AQ9BXX3 1397 aa24.97■■□□□ 1.59
PPP1R3E-209ENST00000561437 SAMD9LQ8IVG5 1584 aa24.96■■□□□ 1.59
PPP1R3E-209ENST00000561437 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
PPP1R3E-209ENST00000561437 CHIC2Q9UKJ5 165 aa24.93■■□□□ 1.58
PPP1R3E-209ENST00000561437 MBD5Q9P267 1494 aa24.92■■□□□ 1.58
PPP1R3E-209ENST00000561437 NCOA1Q15788 1441 aa24.91■■□□□ 1.58
PPP1R3E-209ENST00000561437 C9orf84Q5VXU9 1444 aa24.89■■□□□ 1.58
PPP1R3E-209ENST00000561437 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
PPP1R3E-209ENST00000561437 COL17A1Q9UMD9 1497 aaPredicted RBP24.89■■□□□ 1.57
PPP1R3E-209ENST00000561437 CFAP74Q9C0B2 1584 aa24.88■■□□□ 1.57
PPP1R3E-209ENST00000561437 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
PPP1R3E-209ENST00000561437 TEX14Q8IWB6 1497 aa24.85■■□□□ 1.57
PPP1R3E-209ENST00000561437 HNRNPMP52272 730 aaKnown RBP eCLIP24.85■■□□□ 1.57
PPP1R3E-209ENST00000561437 ABCC1P33527 1531 aa24.85■■□□□ 1.57
PPP1R3E-209ENST00000561437 SYCP2Q9BX26 1530 aa24.85■■□□□ 1.57
PPP1R3E-209ENST00000561437 MAP3K4Q9Y6R4 1608 aa24.84■■□□□ 1.57
PPP1R3E-209ENST00000561437 FANCAO15360 1455 aa24.83■■□□□ 1.57
PPP1R3E-209ENST00000561437 CD109Q6YHK3 1445 aa24.81■■□□□ 1.56
PPP1R3E-209ENST00000561437 FBXO41Q8TF61 875 aa24.81■■□□□ 1.56
PPP1R3E-209ENST00000561437 RTEL1-TNFRSF6BF6WH68 1400 aa24.78■■□□□ 1.56
PPP1R3E-209ENST00000561437 TIMELESSQ9UNS1 1208 aa24.78■■□□□ 1.56
PPP1R3E-209ENST00000561437 ANKRD50Q9ULJ7 1429 aa24.77■■□□□ 1.56
PPP1R3E-209ENST00000561437 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
PPP1R3E-209ENST00000561437 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
PPP1R3E-209ENST00000561437 KIF15Q9NS87 1388 aa24.74■■□□□ 1.55
PPP1R3E-209ENST00000561437 NEO1Q92859 1461 aa24.74■■□□□ 1.55
PPP1R3E-209ENST00000561437 ARHGEF12Q9NZN5 1544 aa24.7■■□□□ 1.54
PPP1R3E-209ENST00000561437 DUOX2Q9NRD8 1548 aa24.69■■□□□ 1.54
PPP1R3E-209ENST00000561437 SPAG9O60271 1321 aaKnown RBP24.68■■□□□ 1.54
PPP1R3E-209ENST00000561437 SCAPERQ9BY12 1400 aa24.68■■□□□ 1.54
PPP1R3E-209ENST00000561437 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
PPP1R3E-209ENST00000561437 ERBINQ96RT1 1412 aa24.66■■□□□ 1.54
PPP1R3E-209ENST00000561437 MPHOSPH9Q99550 1183 aa24.65■■□□□ 1.54
PPP1R3E-209ENST00000561437 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
PPP1R3E-209ENST00000561437 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
PPP1R3E-209ENST00000561437 SLC4A1APQ9BWU0 796 aaKnown RBP24.59■■□□□ 1.53
PPP1R3E-209ENST00000561437 ZFYVE16Q7Z3T8 1539 aa24.59■■□□□ 1.53
PPP1R3E-209ENST00000561437 INO80Q9ULG1 1556 aaPredicted RBP24.59■■□□□ 1.53
PPP1R3E-209ENST00000561437 ATP7AQ04656 1500 aa24.58■■□□□ 1.53
PPP1R3E-209ENST00000561437 POGZQ7Z3K3 1410 aa24.56■■□□□ 1.52
PPP1R3E-209ENST00000561437 AFAP1Q8N556 730 aa24.56■■□□□ 1.52
PPP1R3E-209ENST00000561437 DENND4BO75064 1496 aaPredicted RBP24.55■■□□□ 1.52
PPP1R3E-209ENST00000561437 NUP155O75694 1391 aa24.54■■□□□ 1.52
PPP1R3E-209ENST00000561437 MLH3Q9UHC1 1453 aa24.54■■□□□ 1.52
PPP1R3E-209ENST00000561437 KDM5CP41229 1560 aa24.54■■□□□ 1.52
PPP1R3E-209ENST00000561437 UNC13BO14795 1591 aa24.53■■□□□ 1.52
PPP1R3E-209ENST00000561437 MYT1LQ9UL68 1186 aa24.52■■□□□ 1.52
PPP1R3E-209ENST00000561437 PZPP20742 1482 aa24.51■■□□□ 1.51
PPP1R3E-209ENST00000561437 TONSLQ96HA7 1378 aa24.5■■□□□ 1.51
PPP1R3E-209ENST00000561437 EIF2AK4Q9P2K8 1649 aaKnown RBP24.5■■□□□ 1.51
PPP1R3E-209ENST00000561437 DHX29Q7Z478 1369 aaKnown RBP24.48■■□□□ 1.51
PPP1R3E-209ENST00000561437 NEUROD1Q13562 356 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms