RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
HERC1-212ENST00000561348 ARAP3Q8WWN8 1544 aa15.93■□□□□ 0.14
HERC1-212ENST00000561348 CFAP74Q9C0B2 1584 aa15.92■□□□□ 0.14
HERC1-212ENST00000561348 ADGRL1O94910 1474 aa15.92■□□□□ 0.14
HERC1-212ENST00000561348 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
HERC1-212ENST00000561348 SCAPERQ9BY12 1400 aa15.91■□□□□ 0.14
HERC1-212ENST00000561348 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
HERC1-212ENST00000561348 ARID4BQ4LE39 1312 aaPredicted RBP15.9■□□□□ 0.14
HERC1-212ENST00000561348 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
HERC1-212ENST00000561348 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
HERC1-212ENST00000561348 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
HERC1-212ENST00000561348 TIAM1Q13009 1591 aa15.86■□□□□ 0.13
HERC1-212ENST00000561348 CDC42BPAQ5VT25 1732 aa15.85■□□□□ 0.13
HERC1-212ENST00000561348 KANK4Q5T7N3 995 aaPredicted RBP15.85■□□□□ 0.13
HERC1-212ENST00000561348 AFAP1Q8N556 730 aa15.85■□□□□ 0.13
HERC1-212ENST00000561348 PREX2Q70Z35 1606 aa15.85■□□□□ 0.13
HERC1-212ENST00000561348 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
HERC1-212ENST00000561348 HNRNPMP52272 730 aaKnown RBP eCLIP15.83■□□□□ 0.12
HERC1-212ENST00000561348 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.12
HERC1-212ENST00000561348 FRMPD1Q5SYB0 1578 aa15.83■□□□□ 0.12
HERC1-212ENST00000561348 RICTORQ6R327 1708 aa15.82■□□□□ 0.12
HERC1-212ENST00000561348 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
HERC1-212ENST00000561348 POGZQ7Z3K3 1410 aa15.81■□□□□ 0.12
HERC1-212ENST00000561348 NCOA2Q15596 1464 aa15.8■□□□□ 0.12
HERC1-212ENST00000561348 LRRC9Q6ZRR7 1453 aa15.8■□□□□ 0.12
HERC1-212ENST00000561348 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
HERC1-212ENST00000561348 MLECQ14165 292 aa15.8■□□□□ 0.12
HERC1-212ENST00000561348 YEATS2Q9ULM3 1422 aa15.79■□□□□ 0.12
HERC1-212ENST00000561348 PPARGC1BQ86YN6 1023 aaKnown RBP15.78■□□□□ 0.12
HERC1-212ENST00000561348 ZFYVE16Q7Z3T8 1539 aa15.78■□□□□ 0.12
HERC1-212ENST00000561348 TRAPPC8Q9Y2L5 1435 aa15.77■□□□□ 0.12
HERC1-212ENST00000561348 ZNF518AQ6AHZ1 1483 aa15.77■□□□□ 0.11
HERC1-212ENST00000561348 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
HERC1-212ENST00000561348 SAMD9LQ8IVG5 1584 aa15.76■□□□□ 0.11
HERC1-212ENST00000561348 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
HERC1-212ENST00000561348 ARHGEF12Q9NZN5 1544 aa15.76■□□□□ 0.11
HERC1-212ENST00000561348 ABCC1P33527 1531 aa15.75■□□□□ 0.11
HERC1-212ENST00000561348 ARHGEF40Q8TER5 1519 aa15.73■□□□□ 0.11
HERC1-212ENST00000561348 SPAG9O60271 1321 aaKnown RBP15.73■□□□□ 0.11
HERC1-212ENST00000561348 ZMYM4Q5VZL5 1548 aa15.73■□□□□ 0.11
HERC1-212ENST00000561348 MAP3K1Q13233 1512 aa15.72■□□□□ 0.11
HERC1-212ENST00000561348 MAGI2Q86UL8 1455 aa15.71■□□□□ 0.11
HERC1-212ENST00000561348 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
HERC1-212ENST00000561348 HECW2Q9P2P5 1572 aa15.7■□□□□ 0.1
HERC1-212ENST00000561348 ATP10AO60312 1499 aa15.69■□□□□ 0.1
HERC1-212ENST00000561348 CAMSAP2Q08AD1 1489 aa15.68■□□□□ 0.1
HERC1-212ENST00000561348 KDM5CP41229 1560 aa15.67■□□□□ 0.1
HERC1-212ENST00000561348 C9orf84Q5VXU9 1444 aa15.67■□□□□ 0.1
HERC1-212ENST00000561348 KIAA1107Q9UPP5 1409 aa15.67■□□□□ 0.1
HERC1-212ENST00000561348 MYOM3Q5VTT5 1437 aa15.66■□□□□ 0.1
HERC1-212ENST00000561348 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
HERC1-212ENST00000561348 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
HERC1-212ENST00000561348 ESF1Q9H501 851 aaKnown RBP15.65■□□□□ 0.1
HERC1-212ENST00000561348 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
HERC1-212ENST00000561348 ABCA6Q8N139 1617 aa15.65■□□□□ 0.1
HERC1-212ENST00000561348 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
HERC1-212ENST00000561348 DIP2CQ9Y2E4 1556 aa15.64■□□□□ 0.09
HERC1-212ENST00000561348 BCORL1Q5H9F3 1711 aa15.63■□□□□ 0.09
HERC1-212ENST00000561348 SIGLEC1Q9BZZ2 1709 aa15.63■□□□□ 0.09
HERC1-212ENST00000561348 KIDINS220Q9ULH0 1771 aa15.63■□□□□ 0.09
HERC1-212ENST00000561348 ATP7AQ04656 1500 aa15.63■□□□□ 0.09
HERC1-212ENST00000561348 MADDQ8WXG6 1647 aa15.62■□□□□ 0.09
HERC1-212ENST00000561348 MBD5Q9P267 1494 aa15.61■□□□□ 0.09
HERC1-212ENST00000561348 RIMS1Q86UR5 1692 aaKnown RBP15.6■□□□□ 0.09
HERC1-212ENST00000561348 CCDC141Q6ZP82 1450 aa15.6■□□□□ 0.09
HERC1-212ENST00000561348 RSPH4AQ5TD94 716 aa15.6■□□□□ 0.09
HERC1-212ENST00000561348 GGT6Q6P531 493 aa15.59■□□□□ 0.09
HERC1-212ENST00000561348 ADAMTSL3P82987 1691 aa15.59■□□□□ 0.09
HERC1-212ENST00000561348 MIA2Q96PC5 1412 aa15.59■□□□□ 0.09
HERC1-212ENST00000561348 CHIC2Q9UKJ5 165 aa15.58■□□□□ 0.08
HERC1-212ENST00000561348 PTPRMP28827 1452 aa15.58■□□□□ 0.08
HERC1-212ENST00000561348 PTPN23Q9H3S7 1636 aa15.57■□□□□ 0.08
HERC1-212ENST00000561348 ITGAEP38570 1179 aa15.57■□□□□ 0.08
HERC1-212ENST00000561348 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
HERC1-212ENST00000561348 INO80Q9ULG1 1556 aaPredicted RBP15.57■□□□□ 0.08
HERC1-212ENST00000561348 CEBPAP49715 358 aaPredicted RBP15.56■□□□□ 0.08
HERC1-212ENST00000561348 A2MP01023 1474 aa15.56■□□□□ 0.08
HERC1-212ENST00000561348 FER1L4A9Z1Z3 1794 aa15.56■□□□□ 0.08
HERC1-212ENST00000561348 KIF3BO15066 747 aa15.55■□□□□ 0.08
HERC1-212ENST00000561348 ARHGEF5Q12774 1597 aa15.53■□□□□ 0.08
HERC1-212ENST00000561348 RRP7BPQ9NSQ0 103 aa15.53■□□□□ 0.08
HERC1-212ENST00000561348 RTEL1-TNFRSF6BF6WH68 1400 aa15.52■□□□□ 0.08
HERC1-212ENST00000561348 ADGBQ8N7X0 1667 aa15.52■□□□□ 0.08
HERC1-212ENST00000561348 REREQ9P2R6 1566 aa15.51■□□□□ 0.07
HERC1-212ENST00000561348 DHX29Q7Z478 1369 aaKnown RBP15.49■□□□□ 0.07
HERC1-212ENST00000561348 AGLP35573 1532 aa15.49■□□□□ 0.07
HERC1-212ENST00000561348 ABCC5O15440 1437 aa15.49■□□□□ 0.07
HERC1-212ENST00000561348 DAPK1P53355 1430 aa15.49■□□□□ 0.07
HERC1-212ENST00000561348 TCOF1Q13428 1488 aaKnown RBP15.46■□□□□ 0.07
HERC1-212ENST00000561348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
HERC1-212ENST00000561348 DNMT1P26358 1616 aaKnown RBP15.45■□□□□ 0.06
HERC1-212ENST00000561348 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
HERC1-212ENST00000561348 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
HERC1-212ENST00000561348 WASHC2CQ9Y4E1 1318 aa15.44■□□□□ 0.06
HERC1-212ENST00000561348 HSPA2P54652 639 aa15.44■□□□□ 0.06
HERC1-212ENST00000561348 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
HERC1-212ENST00000561348 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
HERC1-212ENST00000561348 CLTCQ00610 1675 aaKnown RBP15.44■□□□□ 0.06
HERC1-212ENST00000561348 ANKRD30AQ9BXX3 1397 aa15.43■□□□□ 0.06
HERC1-212ENST00000561348 MAST1Q9Y2H9 1570 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms