RNA–Protein interactions for RNA: ENST00000561212.5

ZEB1-222, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 5

Gene ZEB1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-222ENST00000561212 KDM5BQ9UGL1 1544 aa11.18□□□□□ -0.62
ZEB1-222ENST00000561212 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
ZEB1-222ENST00000561212 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
ZEB1-222ENST00000561212 HNRNPUL2Q1KMD3 747 aaKnown RBP11.18□□□□□ -0.62
ZEB1-222ENST00000561212 ARID3CA6NKF2 412 aa11.16□□□□□ -0.62
ZEB1-222ENST00000561212 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
ZEB1-222ENST00000561212 TRHP20396 242 aaPredicted RBP11.15□□□□□ -0.62
ZEB1-222ENST00000561212 CDK11AQ9UQ88 783 aaPredicted RBP11.15□□□□□ -0.62
ZEB1-222ENST00000561212 KIF14Q15058 1648 aa11.15□□□□□ -0.62
ZEB1-222ENST00000561212 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
ZEB1-222ENST00000561212 MIA2Q96PC5 1412 aa11.15□□□□□ -0.63
ZEB1-222ENST00000561212 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
ZEB1-222ENST00000561212 GPATCH8Q9UKJ3 1502 aaKnown RBP11.13□□□□□ -0.63
ZEB1-222ENST00000561212 ZCCHC11Q5TAX3 1644 aaKnown RBP11.13□□□□□ -0.63
ZEB1-222ENST00000561212 PTPN23Q9H3S7 1636 aa11.12□□□□□ -0.63
ZEB1-222ENST00000561212 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
ZEB1-222ENST00000561212 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
ZEB1-222ENST00000561212 PTPRKQ15262 1439 aa11.11□□□□□ -0.63
ZEB1-222ENST00000561212 SAMD1Q6SPF0 538 aaPredicted RBP11.1□□□□□ -0.63
ZEB1-222ENST00000561212 CDC42BPAQ5VT25 1732 aa11.09□□□□□ -0.63
ZEB1-222ENST00000561212 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
ZEB1-222ENST00000561212 ABCB7O75027 752 aa11.07□□□□□ -0.64
ZEB1-222ENST00000561212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
ZEB1-222ENST00000561212 FAM50AQ14320 339 aaKnown RBP11.05□□□□□ -0.64
ZEB1-222ENST00000561212 TTC37Q6PGP7 1564 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 CDC42BPBQ9Y5S2 1711 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
ZEB1-222ENST00000561212 PREX2Q70Z35 1606 aa11.04□□□□□ -0.64
ZEB1-222ENST00000561212 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
ZEB1-222ENST00000561212 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
ZEB1-222ENST00000561212 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
ZEB1-222ENST00000561212 ABCC5O15440 1437 aa11.03□□□□□ -0.64
ZEB1-222ENST00000561212 CAMSAP2Q08AD1 1489 aa11.02□□□□□ -0.65
ZEB1-222ENST00000561212 HFM1A2PYH4 1435 aa11.02□□□□□ -0.65
ZEB1-222ENST00000561212 AKNAQ7Z591 1439 aa11.02□□□□□ -0.65
ZEB1-222ENST00000561212 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
ZEB1-222ENST00000561212 CFDP1Q9UEE9 299 aaPredicted RBP11.01□□□□□ -0.65
ZEB1-222ENST00000561212 MBD5Q9P267 1494 aa11.01□□□□□ -0.65
ZEB1-222ENST00000561212 DAPK1P53355 1430 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 NAIPQ13075 1403 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 ASXL2Q76L83 1435 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 ARAP3Q8WWN8 1544 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 RAB3GAP2Q9H2M9 1393 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 SAMD9LQ8IVG5 1584 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 PLCH2O75038 1416 aa11□□□□□ -0.65
ZEB1-222ENST00000561212 ABCA9Q8IUA7 1624 aa10.99□□□□□ -0.65
ZEB1-222ENST00000561212 ITGAEP38570 1179 aa10.99□□□□□ -0.65
ZEB1-222ENST00000561212 SLC4A1APQ9BWU0 796 aaKnown RBP10.99□□□□□ -0.65
ZEB1-222ENST00000561212 DHX57Q6P158 1386 aaKnown RBP10.99□□□□□ -0.65
ZEB1-222ENST00000561212 MYO5CQ9NQX4 1742 aa10.99□□□□□ -0.65
ZEB1-222ENST00000561212 ROCK1Q13464 1354 aa10.99□□□□□ -0.65
ZEB1-222ENST00000561212 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
ZEB1-222ENST00000561212 ARHGEF5Q12774 1597 aa10.98□□□□□ -0.65
ZEB1-222ENST00000561212 ADGRL2O95490 1459 aa10.97□□□□□ -0.65
ZEB1-222ENST00000561212 MAPKBP1O60336 1514 aa10.97□□□□□ -0.65
ZEB1-222ENST00000561212 GCC2Q8IWJ2 1684 aa10.97□□□□□ -0.65
ZEB1-222ENST00000561212 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
ZEB1-222ENST00000561212 KIAA1107Q9UPP5 1409 aa10.96□□□□□ -0.66
ZEB1-222ENST00000561212 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.66
ZEB1-222ENST00000561212 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
ZEB1-222ENST00000561212 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
ZEB1-222ENST00000561212 ARHGEF12Q9NZN5 1544 aa10.95□□□□□ -0.66
ZEB1-222ENST00000561212 CYB5RLQ6IPT4 315 aa10.94□□□□□ -0.66
ZEB1-222ENST00000561212 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
ZEB1-222ENST00000561212 KDM6BO15054 1643 aa10.94□□□□□ -0.66
ZEB1-222ENST00000561212 ARHGAP5Q13017 1502 aa10.93□□□□□ -0.66
ZEB1-222ENST00000561212 ADGBQ8N7X0 1667 aa10.92□□□□□ -0.66
ZEB1-222ENST00000561212 ABCC1P33527 1531 aa10.92□□□□□ -0.66
ZEB1-222ENST00000561212 MAST1Q9Y2H9 1570 aa10.92□□□□□ -0.66
ZEB1-222ENST00000561212 PLEKHH2Q8IVE3 1493 aa10.91□□□□□ -0.66
ZEB1-222ENST00000561212 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
ZEB1-222ENST00000561212 NPM1P06748 294 aaKnown RBP eCLIP10.91□□□□□ -0.66
ZEB1-222ENST00000561212 RSPH4AQ5TD94 716 aa10.91□□□□□ -0.66
ZEB1-222ENST00000561212 CHIC2Q9UKJ5 165 aa10.91□□□□□ -0.66
ZEB1-222ENST00000561212 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
ZEB1-222ENST00000561212 CCDC141Q6ZP82 1450 aa10.91□□□□□ -0.66
ZEB1-222ENST00000561212 HNRNPMP52272 730 aaKnown RBP eCLIP10.9□□□□□ -0.664e-6■■■■□ 20.1
ZEB1-222ENST00000561212 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
ZEB1-222ENST00000561212 DENND4BO75064 1496 aaPredicted RBP10.9□□□□□ -0.66
ZEB1-222ENST00000561212 GLI2P10070 1586 aa10.9□□□□□ -0.67
ZEB1-222ENST00000561212 RRP7BPQ9NSQ0 103 aa10.89□□□□□ -0.67
ZEB1-222ENST00000561212 C9orf84Q5VXU9 1444 aa10.89□□□□□ -0.67
ZEB1-222ENST00000561212 FANCAO15360 1455 aa10.88□□□□□ -0.67
ZEB1-222ENST00000561212 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
ZEB1-222ENST00000561212 TRAPPC8Q9Y2L5 1435 aa10.87□□□□□ -0.67
ZEB1-222ENST00000561212 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
ZEB1-222ENST00000561212 ZNF316A6NFI3 1004 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-222ENST00000561212 PLXNC1O60486 1568 aa10.86□□□□□ -0.67
ZEB1-222ENST00000561212 CD109Q6YHK3 1445 aa10.85□□□□□ -0.67
ZEB1-222ENST00000561212 DIP2BQ9P265 1576 aa10.85□□□□□ -0.67
ZEB1-222ENST00000561212 RTEL1-TNFRSF6BF6WH68 1400 aa10.84□□□□□ -0.67
ZEB1-222ENST00000561212 ACIN1Q9UKV3 1341 aaKnown RBP10.84□□□□□ -0.67
ZEB1-222ENST00000561212 TSPY4P0CV99 314 aa10.84□□□□□ -0.67
ZEB1-222ENST00000561212 TSPY10P0CW01 314 aa10.84□□□□□ -0.67
ZEB1-222ENST00000561212 POLA2Q14181 598 aa10.84□□□□□ -0.67
ZEB1-222ENST00000561212 ANKRD50Q9ULJ7 1429 aa10.83□□□□□ -0.68
ZEB1-222ENST00000561212 KIF15Q9NS87 1388 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms