RNA–Protein interactions for RNA: ENST00000561119.5

CRTC3-211, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 630 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-211ENST00000561119 SETD1BQ9UPS6 1966 aaKnown RBP16.84■□□□□ 0.29
CRTC3-211ENST00000561119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
CRTC3-211ENST00000561119 NCOA1Q15788 1441 aa16.83■□□□□ 0.28
CRTC3-211ENST00000561119 HNRNPUL2Q1KMD3 747 aaKnown RBP16.83■□□□□ 0.28
CRTC3-211ENST00000561119 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
CRTC3-211ENST00000561119 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
CRTC3-211ENST00000561119 SUPT5HO00267 1087 aaKnown RBP16.8■□□□□ 0.28
CRTC3-211ENST00000561119 P3H3Q8IVL6 736 aa16.78■□□□□ 0.28
CRTC3-211ENST00000561119 TOM1O60784 492 aa16.77■□□□□ 0.28
CRTC3-211ENST00000561119 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
CRTC3-211ENST00000561119 ZMYM4Q5VZL5 1548 aa16.75■□□□□ 0.27
CRTC3-211ENST00000561119 CAMSAP1Q5T5Y3 1602 aa16.75■□□□□ 0.27
CRTC3-211ENST00000561119 POTEAQ6S8J7 498 aa16.72■□□□□ 0.27
CRTC3-211ENST00000561119 ATP10AO60312 1499 aa16.72■□□□□ 0.27
CRTC3-211ENST00000561119 C3P01024 1663 aa16.72■□□□□ 0.27
CRTC3-211ENST00000561119 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
CRTC3-211ENST00000561119 C9orf84Q5VXU9 1444 aa16.7■□□□□ 0.26
CRTC3-211ENST00000561119 GOLGA3Q08378 1498 aa16.7■□□□□ 0.26
CRTC3-211ENST00000561119 MAGI2Q86UL8 1455 aa16.69■□□□□ 0.26
CRTC3-211ENST00000561119 TRAPPC8Q9Y2L5 1435 aa16.69■□□□□ 0.26
CRTC3-211ENST00000561119 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
CRTC3-211ENST00000561119 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
CRTC3-211ENST00000561119 SCAPERQ9BY12 1400 aa16.65■□□□□ 0.26
CRTC3-211ENST00000561119 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
CRTC3-211ENST00000561119 PPP6R1Q9UPN7 881 aa16.64■□□□□ 0.25
CRTC3-211ENST00000561119 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
CRTC3-211ENST00000561119 CFAP74Q9C0B2 1584 aa16.63■□□□□ 0.25
CRTC3-211ENST00000561119 CTTNBP2Q8WZ74 1663 aa16.61■□□□□ 0.25
CRTC3-211ENST00000561119 SRCAPQ6ZRS2 3230 aa16.6■□□□□ 0.25
CRTC3-211ENST00000561119 PKD2Q13563 968 aa16.59■□□□□ 0.25
CRTC3-211ENST00000561119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
CRTC3-211ENST00000561119 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
CRTC3-211ENST00000561119 PLEKHD1A6NEE1 506 aa16.56■□□□□ 0.24
CRTC3-211ENST00000561119 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
CRTC3-211ENST00000561119 AFAP1Q8N556 730 aa16.53■□□□□ 0.24
CRTC3-211ENST00000561119 SUPT6HQ7KZ85 1726 aaKnown RBP16.53■□□□□ 0.24
CRTC3-211ENST00000561119 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.24
CRTC3-211ENST00000561119 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
CRTC3-211ENST00000561119 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
CRTC3-211ENST00000561119 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
CRTC3-211ENST00000561119 CPS1P31327 1500 aa16.49■□□□□ 0.23
CRTC3-211ENST00000561119 NUP153P49790 1475 aaKnown RBP16.48■□□□□ 0.23
CRTC3-211ENST00000561119 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
CRTC3-211ENST00000561119 DIP2CQ9Y2E4 1556 aa16.46■□□□□ 0.23
CRTC3-211ENST00000561119 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
CRTC3-211ENST00000561119 ZMYM3Q14202 1370 aa16.44■□□□□ 0.22
CRTC3-211ENST00000561119 NPATQ14207 1427 aa16.44■□□□□ 0.22
CRTC3-211ENST00000561119 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
CRTC3-211ENST00000561119 MYO3AQ8NEV4 1616 aa16.42■□□□□ 0.22
CRTC3-211ENST00000561119 PLCH2O75038 1416 aa16.42■□□□□ 0.22
CRTC3-211ENST00000561119 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
CRTC3-211ENST00000561119 ABCA6Q8N139 1617 aa16.41■□□□□ 0.22
CRTC3-211ENST00000561119 EFCAB2Q5VUJ9 269 aa16.41■□□□□ 0.22
CRTC3-211ENST00000561119 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
CRTC3-211ENST00000561119 ZNF518AQ6AHZ1 1483 aa16.39■□□□□ 0.21
CRTC3-211ENST00000561119 ZNF142P52746 1687 aaPredicted RBP16.39■□□□□ 0.21
CRTC3-211ENST00000561119 AGLP35573 1532 aa16.39■□□□□ 0.21
CRTC3-211ENST00000561119 VWDEQ8N2E2 1590 aa16.35■□□□□ 0.21
CRTC3-211ENST00000561119 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
CRTC3-211ENST00000561119 KDM5CP41229 1560 aa16.34■□□□□ 0.21
CRTC3-211ENST00000561119 NEURL4Q96JN8 1562 aa16.34■□□□□ 0.21
CRTC3-211ENST00000561119 MROH2AA6NES4 1674 aa16.32■□□□□ 0.2
CRTC3-211ENST00000561119 CLTCQ00610 1675 aaKnown RBP16.31■□□□□ 0.2
CRTC3-211ENST00000561119 POLR1AO95602 1720 aaPredicted RBP16.31■□□□□ 0.2
CRTC3-211ENST00000561119 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
CRTC3-211ENST00000561119 LRRC7Q96NW7 1537 aa16.29■□□□□ 0.2
CRTC3-211ENST00000561119 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
CRTC3-211ENST00000561119 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
CRTC3-211ENST00000561119 MYO5CQ9NQX4 1742 aa16.28■□□□□ 0.2
CRTC3-211ENST00000561119 RNF17Q9BXT8 1623 aaKnown RBP16.28■□□□□ 0.2
CRTC3-211ENST00000561119 SAMD9Q5K651 1589 aa16.27■□□□□ 0.2
CRTC3-211ENST00000561119 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.2
CRTC3-211ENST00000561119 ARHGAP5Q13017 1502 aa16.27■□□□□ 0.2
CRTC3-211ENST00000561119 A2ML1A8K2U0 1454 aa16.27■□□□□ 0.19
CRTC3-211ENST00000561119 MLH3Q9UHC1 1453 aa16.26■□□□□ 0.19
CRTC3-211ENST00000561119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
CRTC3-211ENST00000561119 GGT6Q6P531 493 aa16.25■□□□□ 0.19
CRTC3-211ENST00000561119 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
CRTC3-211ENST00000561119 NPHP4O75161 1426 aaPredicted RBP16.22■□□□□ 0.19
CRTC3-211ENST00000561119 KIDINS220Q9ULH0 1771 aa16.21■□□□□ 0.18
CRTC3-211ENST00000561119 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
CRTC3-211ENST00000561119 FBXO31Q5XUX0 539 aaPredicted RBP16.19■□□□□ 0.18
CRTC3-211ENST00000561119 KIF14Q15058 1648 aa16.19■□□□□ 0.18
CRTC3-211ENST00000561119 MEX3CQ5U5Q3 659 aaKnown RBP16.17■□□□□ 0.18
CRTC3-211ENST00000561119 RXRBP28702 533 aa16.16■□□□□ 0.18
CRTC3-211ENST00000561119 SETBP1Q9Y6X0 1596 aa16.16■□□□□ 0.18
CRTC3-211ENST00000561119 ABCC1P33527 1531 aa16.15■□□□□ 0.18
CRTC3-211ENST00000561119 ITSN2Q9NZM3 1697 aa16.15■□□□□ 0.18
CRTC3-211ENST00000561119 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
CRTC3-211ENST00000561119 ZNF772Q68DY9 489 aaPredicted RBP16.14■□□□□ 0.17
CRTC3-211ENST00000561119 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
CRTC3-211ENST00000561119 SYNMO15061 1565 aa16.13■□□□□ 0.17
CRTC3-211ENST00000561119 RBM33Q96EV2 1170 aaKnown RBP16.13■□□□□ 0.17
CRTC3-211ENST00000561119 IQGAP1P46940 1657 aa16.13■□□□□ 0.17
CRTC3-211ENST00000561119 TNRQ92752 1358 aa16.13■□□□□ 0.17
CRTC3-211ENST00000561119 THEMISQ8N1K5 641 aaPredicted RBP16.12■□□□□ 0.17
CRTC3-211ENST00000561119 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
CRTC3-211ENST00000561119 XIRP1Q702N8 1843 aaKnown RBP16.1■□□□□ 0.17
CRTC3-211ENST00000561119 NUTM2BA6NNL0 878 aaPredicted RBP16.1■□□□□ 0.17
CRTC3-211ENST00000561119 NUTM2EB1AL46 878 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms