RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 APLP2Q06481 763 aa26.19■■□□□ 1.78
RPL28-211ENST00000560881 NCOA2Q15596 1464 aa26.19■■□□□ 1.78
RPL28-211ENST00000560881 AKNAQ7Z591 1439 aa26.19■■□□□ 1.78
RPL28-211ENST00000560881 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
RPL28-211ENST00000560881 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
RPL28-211ENST00000560881 FRMPD1Q5SYB0 1578 aa26.13■■□□□ 1.77
RPL28-211ENST00000560881 PHLDB1Q86UU1 1377 aa26.13■■□□□ 1.77
RPL28-211ENST00000560881 ADGRL1O94910 1474 aa26.13■■□□□ 1.77
RPL28-211ENST00000560881 ITSN2Q9NZM3 1697 aa26.13■■□□□ 1.77
RPL28-211ENST00000560881 EFCAB2Q5VUJ9 269 aa26.12■■□□□ 1.77
RPL28-211ENST00000560881 RAPGEF3O95398 923 aa26.11■■□□□ 1.77
RPL28-211ENST00000560881 RICTORQ6R327 1708 aa26.11■■□□□ 1.77
RPL28-211ENST00000560881 SAMD9LQ8IVG5 1584 aa26.1■■□□□ 1.77
RPL28-211ENST00000560881 SCAPERQ9BY12 1400 aa26.08■■□□□ 1.77
RPL28-211ENST00000560881 ZNF777Q9ULD5 760 aaPredicted RBP26.07■■□□□ 1.76
RPL28-211ENST00000560881 DENND4BO75064 1496 aaPredicted RBP26.07■■□□□ 1.76
RPL28-211ENST00000560881 ABCC1P33527 1531 aa26.07■■□□□ 1.76
RPL28-211ENST00000560881 CFDP1Q9UEE9 299 aaPredicted RBP26.06■■□□□ 1.76
RPL28-211ENST00000560881 ARHGEF12Q9NZN5 1544 aa26.04■■□□□ 1.76
RPL28-211ENST00000560881 POGZQ7Z3K3 1410 aa26.02■■□□□ 1.76
RPL28-211ENST00000560881 SYCP2Q9BX26 1530 aa26.02■■□□□ 1.76
RPL28-211ENST00000560881 PPARGC1BQ86YN6 1023 aaKnown RBP26.01■■□□□ 1.75
RPL28-211ENST00000560881 ZNF644Q9H582 1327 aaPredicted RBP26■■□□□ 1.75
RPL28-211ENST00000560881 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
RPL28-211ENST00000560881 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
RPL28-211ENST00000560881 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.75
RPL28-211ENST00000560881 CAMSAP2Q08AD1 1489 aa25.95■■□□□ 1.74
RPL28-211ENST00000560881 AFAP1Q8N556 730 aa25.95■■□□□ 1.74
RPL28-211ENST00000560881 ZNF518AQ6AHZ1 1483 aa25.94■■□□□ 1.74
RPL28-211ENST00000560881 HNRNPMP52272 730 aaKnown RBP eCLIP25.94■■□□□ 1.745e-6■■■■□ 20.3
RPL28-211ENST00000560881 KDM5CP41229 1560 aa25.94■■□□□ 1.74
RPL28-211ENST00000560881 PLEKHH2Q8IVE3 1493 aa25.91■■□□□ 1.74
RPL28-211ENST00000560881 ARHGEF40Q8TER5 1519 aa25.9■■□□□ 1.74
RPL28-211ENST00000560881 YEATS2Q9ULM3 1422 aa25.89■■□□□ 1.74
RPL28-211ENST00000560881 KIAA1107Q9UPP5 1409 aa25.89■■□□□ 1.74
RPL28-211ENST00000560881 HECW2Q9P2P5 1572 aa25.88■■□□□ 1.73
RPL28-211ENST00000560881 ZFYVE16Q7Z3T8 1539 aa25.88■■□□□ 1.73
RPL28-211ENST00000560881 MIA2Q96PC5 1412 aa25.87■■□□□ 1.73
RPL28-211ENST00000560881 MBD5Q9P267 1494 aa25.87■■□□□ 1.73
RPL28-211ENST00000560881 PTPN23Q9H3S7 1636 aa25.86■■□□□ 1.73
RPL28-211ENST00000560881 FGD6Q6ZV73 1430 aa25.85■■□□□ 1.73
RPL28-211ENST00000560881 KIDINS220Q9ULH0 1771 aa25.83■■□□□ 1.73
RPL28-211ENST00000560881 MAGI2Q86UL8 1455 aa25.83■■□□□ 1.72
RPL28-211ENST00000560881 ABCA6Q8N139 1617 aa25.82■■□□□ 1.72
RPL28-211ENST00000560881 SIGLEC1Q9BZZ2 1709 aa25.81■■□□□ 1.72
RPL28-211ENST00000560881 MYT1LQ9UL68 1186 aa25.81■■□□□ 1.72
RPL28-211ENST00000560881 MLH3Q9UHC1 1453 aa25.8■■□□□ 1.72
RPL28-211ENST00000560881 INO80Q9ULG1 1556 aaPredicted RBP25.79■■□□□ 1.72
RPL28-211ENST00000560881 DIP2CQ9Y2E4 1556 aa25.79■■□□□ 1.72
RPL28-211ENST00000560881 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
RPL28-211ENST00000560881 CCDC141Q6ZP82 1450 aa25.79■■□□□ 1.72
RPL28-211ENST00000560881 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
RPL28-211ENST00000560881 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
RPL28-211ENST00000560881 ATP7AQ04656 1500 aa25.77■■□□□ 1.72
RPL28-211ENST00000560881 ATP10AO60312 1499 aa25.72■■□□□ 1.71
RPL28-211ENST00000560881 CROCC2H7BZ55 1655 aa25.71■■□□□ 1.71
RPL28-211ENST00000560881 C9orf84Q5VXU9 1444 aa25.7■■□□□ 1.71
RPL28-211ENST00000560881 FAM50AQ14320 339 aaKnown RBP25.7■■□□□ 1.7
RPL28-211ENST00000560881 DNMT1P26358 1616 aaKnown RBP25.69■■□□□ 1.7
RPL28-211ENST00000560881 ABCC5O15440 1437 aa25.67■■□□□ 1.7
RPL28-211ENST00000560881 ADGBQ8N7X0 1667 aa25.67■■□□□ 1.7
RPL28-211ENST00000560881 ARID4BQ4LE39 1312 aaPredicted RBP25.67■■□□□ 1.7
RPL28-211ENST00000560881 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
RPL28-211ENST00000560881 DAPK1P53355 1430 aa25.66■■□□□ 1.7
RPL28-211ENST00000560881 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
RPL28-211ENST00000560881 MAST1Q9Y2H9 1570 aa25.65■■□□□ 1.7
RPL28-211ENST00000560881 KDM4FA0A1W2PPD8 638 aa25.64■■□□□ 1.7
RPL28-211ENST00000560881 REREQ9P2R6 1566 aa25.64■■□□□ 1.7
RPL28-211ENST00000560881 BCORL1Q5H9F3 1711 aa25.64■■□□□ 1.69
RPL28-211ENST00000560881 TSPY4P0CV99 314 aa25.63■■□□□ 1.69
RPL28-211ENST00000560881 TSPY10P0CW01 314 aa25.63■■□□□ 1.69
RPL28-211ENST00000560881 PLXNC1O60486 1568 aa25.6■■□□□ 1.69
RPL28-211ENST00000560881 A2MP01023 1474 aa25.6■■□□□ 1.69
RPL28-211ENST00000560881 SHANK2Q9UPX8 1470 aa25.6■■□□□ 1.69
RPL28-211ENST00000560881 RRBP1Q9P2E9 1410 aaKnown RBP25.58■■□□□ 1.69
RPL28-211ENST00000560881 MLECQ14165 292 aa25.58■■□□□ 1.68
RPL28-211ENST00000560881 ADAMTSL3P82987 1691 aa25.58■■□□□ 1.68
RPL28-211ENST00000560881 CHIC2Q9UKJ5 165 aa25.56■■□□□ 1.68
RPL28-211ENST00000560881 MADDQ8WXG6 1647 aa25.56■■□□□ 1.68
RPL28-211ENST00000560881 AGLP35573 1532 aa25.55■■□□□ 1.68
RPL28-211ENST00000560881 PTPRKQ15262 1439 aa25.54■■□□□ 1.68
RPL28-211ENST00000560881 ITGAEP38570 1179 aa25.52■■□□□ 1.68
RPL28-211ENST00000560881 FER1L4A9Z1Z3 1794 aa25.51■■□□□ 1.67
RPL28-211ENST00000560881 DHX29Q7Z478 1369 aaKnown RBP25.5■■□□□ 1.67
RPL28-211ENST00000560881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.49■■□□□ 1.67
RPL28-211ENST00000560881 RIMS1Q86UR5 1692 aaKnown RBP25.49■■□□□ 1.67
RPL28-211ENST00000560881 RRP7BPQ9NSQ0 103 aa25.48■■□□□ 1.67
RPL28-211ENST00000560881 KIF15Q9NS87 1388 aa25.48■■□□□ 1.67
RPL28-211ENST00000560881 ADGRL2O95490 1459 aa25.46■■□□□ 1.67
RPL28-211ENST00000560881 NCOA1Q15788 1441 aa25.45■■□□□ 1.66
RPL28-211ENST00000560881 DUOX2Q9NRD8 1548 aa25.45■■□□□ 1.66
RPL28-211ENST00000560881 ANKRD30AQ9BXX3 1397 aa25.45■■□□□ 1.66
RPL28-211ENST00000560881 KIF3BO15066 747 aa25.42■■□□□ 1.66
RPL28-211ENST00000560881 GGT6Q6P531 493 aa25.41■■□□□ 1.66
RPL28-211ENST00000560881 EIF2AK4Q9P2K8 1649 aaKnown RBP25.4■■□□□ 1.66
RPL28-211ENST00000560881 PTPRMP28827 1452 aa25.39■■□□□ 1.66
RPL28-211ENST00000560881 AEBP2Q6ZN18 517 aaPredicted RBP25.37■■□□□ 1.65
RPL28-211ENST00000560881 RNF17Q9BXT8 1623 aaKnown RBP25.37■■□□□ 1.65
RPL28-211ENST00000560881 ERBINQ96RT1 1412 aa25.36■■□□□ 1.65
RPL28-211ENST00000560881 CLTCQ00610 1675 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms