RNA–Protein interactions for RNA: ENST00000560033.5

PSMA4-217, Transcript of proteasome subunit alpha 4, humanhuman

TSL 4

Gene PSMA4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-217ENST00000560033 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
PSMA4-217ENST00000560033 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
PSMA4-217ENST00000560033 TMEM92Q6UXU6 159 aa12.58□□□□□ -0.4
PSMA4-217ENST00000560033 G3V3G9 751 aa12.57□□□□□ -0.4
PSMA4-217ENST00000560033 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
PSMA4-217ENST00000560033 SUPT5HO00267 1087 aaKnown RBP12.52□□□□□ -0.41
PSMA4-217ENST00000560033 KIF3CO14782 793 aa12.5□□□□□ -0.41
PSMA4-217ENST00000560033 LCE2DQ5TA82 110 aaPredicted RBP12.5□□□□□ -0.41
PSMA4-217ENST00000560033 HOXB3P14651 431 aaPredicted RBP12.42□□□□□ -0.42
PSMA4-217ENST00000560033 UNC13AQ9UPW8 1703 aa12.4□□□□□ -0.42
PSMA4-217ENST00000560033 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
PSMA4-217ENST00000560033 SNPHO15079 494 aa12.4□□□□□ -0.42
PSMA4-217ENST00000560033 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.39□□□□□ -0.43
PSMA4-217ENST00000560033 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
PSMA4-217ENST00000560033 CRISPLD2Q9H0B8 497 aa12.37□□□□□ -0.43
PSMA4-217ENST00000560033 ST18O60284 1047 aa12.36□□□□□ -0.43
PSMA4-217ENST00000560033 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
PSMA4-217ENST00000560033 GPHNQ9NQX3 736 aaPredicted RBP12.36□□□□□ -0.43
PSMA4-217ENST00000560033 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
PSMA4-217ENST00000560033 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
PSMA4-217ENST00000560033 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
PSMA4-217ENST00000560033 TMC2Q8TDI7 906 aa12.33□□□□□ -0.44
PSMA4-217ENST00000560033 FOXK1P85037 733 aa12.32□□□□□ -0.44
PSMA4-217ENST00000560033 CECR2Q9BXF3 1484 aa12.32□□□□□ -0.44
PSMA4-217ENST00000560033 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
PSMA4-217ENST00000560033 RSF1Q96T23 1441 aaPredicted RBP12.3□□□□□ -0.44
PSMA4-217ENST00000560033 DOK7Q18PE1 504 aa12.29□□□□□ -0.44
PSMA4-217ENST00000560033 DSG2Q14126 1118 aa12.28□□□□□ -0.44
PSMA4-217ENST00000560033 SLC34A2O95436 690 aa12.27□□□□□ -0.45
PSMA4-217ENST00000560033 CFAP44Q96MT7 982 aa12.27□□□□□ -0.45
PSMA4-217ENST00000560033 MFSD10Q14728 455 aa12.26□□□□□ -0.45
PSMA4-217ENST00000560033 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
PSMA4-217ENST00000560033 PDE4AP27815 886 aa12.25□□□□□ -0.45
PSMA4-217ENST00000560033 GPR153Q6NV75 609 aa12.25□□□□□ -0.45
PSMA4-217ENST00000560033 HOXB1P14653 301 aaPredicted RBP12.24□□□□□ -0.45
PSMA4-217ENST00000560033 MROH2BQ7Z745 1585 aa12.24□□□□□ -0.45
PSMA4-217ENST00000560033 BAZ1AQ9NRL2 1556 aaPredicted RBP12.23□□□□□ -0.45
PSMA4-217ENST00000560033 POTEMA6NI47 508 aa12.23□□□□□ -0.45
PSMA4-217ENST00000560033 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
PSMA4-217ENST00000560033 PLPP6Q8IY26 295 aa12.23□□□□□ -0.45
PSMA4-217ENST00000560033 PPP1R15BQ5SWA1 713 aa12.2□□□□□ -0.46
PSMA4-217ENST00000560033 RIMBP2O15034 1052 aa12.19□□□□□ -0.46
PSMA4-217ENST00000560033 ZNF710Q8N1W2 664 aa12.19□□□□□ -0.46
PSMA4-217ENST00000560033 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
PSMA4-217ENST00000560033 PTCD2Q8WV60 388 aaKnown RBP12.18□□□□□ -0.46
PSMA4-217ENST00000560033 SMARCA4P51532 1647 aa12.16□□□□□ -0.46
PSMA4-217ENST00000560033 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
PSMA4-217ENST00000560033 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
PSMA4-217ENST00000560033 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
PSMA4-217ENST00000560033 PLCB2Q00722 1185 aa12.15□□□□□ -0.46
PSMA4-217ENST00000560033 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
PSMA4-217ENST00000560033 ARSIQ5FYB1 569 aa12.14□□□□□ -0.47
PSMA4-217ENST00000560033 WIZO95785 1651 aa12.13□□□□□ -0.47
PSMA4-217ENST00000560033 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
PSMA4-217ENST00000560033 KHSRPQ92945 711 aaKnown RBP eCLIP12.13□□□□□ -0.47
PSMA4-217ENST00000560033 POTEB3A0JP26 581 aa12.12□□□□□ -0.47
PSMA4-217ENST00000560033 POTEBQ6S5H4 581 aa12.12□□□□□ -0.47
PSMA4-217ENST00000560033 TSHZ2Q9NRE2 1034 aa12.12□□□□□ -0.47
PSMA4-217ENST00000560033 EMP3P54852 163 aa12.11□□□□□ -0.47
PSMA4-217ENST00000560033 CAMK2BQ13554 666 aa12.11□□□□□ -0.47
PSMA4-217ENST00000560033 EMILIN3Q9NT22 766 aa12.08□□□□□ -0.48
PSMA4-217ENST00000560033 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
PSMA4-217ENST00000560033 PCDH10Q9P2E7 1040 aa12.06□□□□□ -0.48
PSMA4-217ENST00000560033 NUDT7P0C024 238 aa12.05□□□□□ -0.48
PSMA4-217ENST00000560033 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
PSMA4-217ENST00000560033 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-217ENST00000560033 TOP2AP11388 1531 aaKnown RBP12.02□□□□□ -0.48
PSMA4-217ENST00000560033 TBC1D12O60347 775 aa12.01□□□□□ -0.49
PSMA4-217ENST00000560033 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
PSMA4-217ENST00000560033 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
PSMA4-217ENST00000560033 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
PSMA4-217ENST00000560033 LHX6Q9UPM6 363 aa12□□□□□ -0.49
PSMA4-217ENST00000560033 ERBB3P21860 1342 aa12□□□□□ -0.49
PSMA4-217ENST00000560033 PEG3Q9GZU2 1588 aa12□□□□□ -0.49
PSMA4-217ENST00000560033 VARS2Q5ST30 1063 aaKnown RBP11.98□□□□□ -0.49
PSMA4-217ENST00000560033 ARIH1Q9Y4X5 557 aaPredicted RBP11.98□□□□□ -0.49
PSMA4-217ENST00000560033 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
PSMA4-217ENST00000560033 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
PSMA4-217ENST00000560033 SMARCA2P51531 1590 aa11.96□□□□□ -0.49
PSMA4-217ENST00000560033 E2F4Q16254 413 aa11.95□□□□□ -0.5
PSMA4-217ENST00000560033 ZNF687Q8N1G0 1237 aa11.95□□□□□ -0.5
PSMA4-217ENST00000560033 KRTAP3-3Q9BYR6 98 aa11.95□□□□□ -0.5
PSMA4-217ENST00000560033 KRTAP3-2Q9BYR7 98 aa11.95□□□□□ -0.5
PSMA4-217ENST00000560033 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
PSMA4-217ENST00000560033 EVI5O60447 810 aa11.92□□□□□ -0.5
PSMA4-217ENST00000560033 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
PSMA4-217ENST00000560033 WDR70Q9NW82 654 aa11.91□□□□□ -0.5
PSMA4-217ENST00000560033 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
PSMA4-217ENST00000560033 PSDA5PKW4 1024 aaPredicted RBP11.9□□□□□ -0.5
PSMA4-217ENST00000560033 DPYSL4O14531 572 aa11.9□□□□□ -0.5
PSMA4-217ENST00000560033 POTEEQ6S8J3 1075 aa11.88□□□□□ -0.51
PSMA4-217ENST00000560033 FOSBP53539 338 aa11.87□□□□□ -0.51
PSMA4-217ENST00000560033 NCAPD3P42695 1498 aa11.87□□□□□ -0.51
PSMA4-217ENST00000560033 PDIA6Q15084 440 aa11.86□□□□□ -0.51
PSMA4-217ENST00000560033 PTGER2P43116 358 aa11.85□□□□□ -0.51
PSMA4-217ENST00000560033 HAP1P54257 671 aaPredicted RBP11.85□□□□□ -0.51
PSMA4-217ENST00000560033 JPH4Q96JJ6 628 aa11.85□□□□□ -0.51
PSMA4-217ENST00000560033 KDM2AQ9Y2K7 1162 aa11.84□□□□□ -0.51
PSMA4-217ENST00000560033 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
PSMA4-217ENST00000560033 SPDYE16A6NNV3 312 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms