RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 NCOA2Q15596 1464 aa14.57□□□□□ -0.08
HERC1-206ENST00000559996 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
HERC1-206ENST00000559996 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
HERC1-206ENST00000559996 SUPT6HQ7KZ85 1726 aaKnown RBP14.54□□□□□ -0.08
HERC1-206ENST00000559996 KCNA4P22459 653 aa14.53□□□□□ -0.08
HERC1-206ENST00000559996 GPATCH8Q9UKJ3 1502 aaKnown RBP14.52□□□□□ -0.08
HERC1-206ENST00000559996 ABCA9Q8IUA7 1624 aa14.51□□□□□ -0.09
HERC1-206ENST00000559996 GLI2P10070 1586 aa14.51□□□□□ -0.09
HERC1-206ENST00000559996 TTC37Q6PGP7 1564 aa14.51□□□□□ -0.09
HERC1-206ENST00000559996 DIP2BQ9P265 1576 aa14.49□□□□□ -0.09
HERC1-206ENST00000559996 FAM69CQ0P6D2 419 aa14.48□□□□□ -0.09
HERC1-206ENST00000559996 PLCH2O75038 1416 aa14.48□□□□□ -0.09
HERC1-206ENST00000559996 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
HERC1-206ENST00000559996 CCNB3Q8WWL7 1395 aa14.47□□□□□ -0.09
HERC1-206ENST00000559996 CDC42BPAQ5VT25 1732 aa14.47□□□□□ -0.09
HERC1-206ENST00000559996 CDC42BPBQ9Y5S2 1711 aa14.46□□□□□ -0.09
HERC1-206ENST00000559996 KIF13AQ9H1H9 1805 aa14.46□□□□□ -0.09
HERC1-206ENST00000559996 RRBP1Q9P2E9 1410 aaKnown RBP14.46□□□□□ -0.09
HERC1-206ENST00000559996 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
HERC1-206ENST00000559996 CD109Q6YHK3 1445 aa14.45□□□□□ -0.1
HERC1-206ENST00000559996 MAP3K4Q9Y6R4 1608 aa14.44□□□□□ -0.1
HERC1-206ENST00000559996 FGD6Q6ZV73 1430 aa14.44□□□□□ -0.1
HERC1-206ENST00000559996 MIA2Q96PC5 1412 aa14.44□□□□□ -0.1
HERC1-206ENST00000559996 U3KPZ7 1027 aaPredicted RBP14.44□□□□□ -0.1
HERC1-206ENST00000559996 ARAP3Q8WWN8 1544 aa14.42□□□□□ -0.1
HERC1-206ENST00000559996 PREX2Q70Z35 1606 aa14.42□□□□□ -0.1
HERC1-206ENST00000559996 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
HERC1-206ENST00000559996 TCOF1Q13428 1488 aaKnown RBP14.42□□□□□ -0.1
HERC1-206ENST00000559996 PPRC1Q5VV67 1664 aaKnown RBP14.41□□□□□ -0.1
HERC1-206ENST00000559996 MYO5CQ9NQX4 1742 aa14.41□□□□□ -0.1
HERC1-206ENST00000559996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.4□□□□□ -0.1
HERC1-206ENST00000559996 EFCAB2Q5VUJ9 269 aa14.39□□□□□ -0.11
HERC1-206ENST00000559996 PTPN23Q9H3S7 1636 aa14.38□□□□□ -0.11
HERC1-206ENST00000559996 ARHGEF12Q9NZN5 1544 aa14.38□□□□□ -0.11
HERC1-206ENST00000559996 ITSN2Q9NZM3 1697 aa14.38□□□□□ -0.11
HERC1-206ENST00000559996 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
HERC1-206ENST00000559996 MBD5Q9P267 1494 aa14.38□□□□□ -0.11
HERC1-206ENST00000559996 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
HERC1-206ENST00000559996 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
HERC1-206ENST00000559996 ARHGAP5Q13017 1502 aa14.36□□□□□ -0.11
HERC1-206ENST00000559996 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
HERC1-206ENST00000559996 FANCAO15360 1455 aa14.36□□□□□ -0.11
HERC1-206ENST00000559996 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
HERC1-206ENST00000559996 PTPRKQ15262 1439 aa14.35□□□□□ -0.11
HERC1-206ENST00000559996 AKNAQ7Z591 1439 aa14.35□□□□□ -0.11
HERC1-206ENST00000559996 KIAA1107Q9UPP5 1409 aa14.34□□□□□ -0.11
HERC1-206ENST00000559996 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
HERC1-206ENST00000559996 FAM50AQ14320 339 aaKnown RBP14.34□□□□□ -0.11
HERC1-206ENST00000559996 TSPOAP1O95153 1857 aa14.33□□□□□ -0.11
HERC1-206ENST00000559996 ABCC5O15440 1437 aa14.32□□□□□ -0.12
HERC1-206ENST00000559996 NEO1Q92859 1461 aa14.32□□□□□ -0.12
HERC1-206ENST00000559996 COL17A1Q9UMD9 1497 aaPredicted RBP14.31□□□□□ -0.12
HERC1-206ENST00000559996 ABCC1P33527 1531 aa14.31□□□□□ -0.12
HERC1-206ENST00000559996 SCAPERQ9BY12 1400 aa14.31□□□□□ -0.12
HERC1-206ENST00000559996 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
HERC1-206ENST00000559996 CAPN15O75808 1086 aa14.29□□□□□ -0.12
HERC1-206ENST00000559996 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
HERC1-206ENST00000559996 SPINK5Q9NQ38 1064 aaPredicted RBP14.29□□□□□ -0.12
HERC1-206ENST00000559996 DAPK1P53355 1430 aa14.29□□□□□ -0.12
HERC1-206ENST00000559996 PLEKHH2Q8IVE3 1493 aa14.29□□□□□ -0.12
HERC1-206ENST00000559996 SYCP2Q9BX26 1530 aa14.29□□□□□ -0.12
HERC1-206ENST00000559996 ADGRL1O94910 1474 aa14.28□□□□□ -0.12
HERC1-206ENST00000559996 DNMT1P26358 1616 aaKnown RBP14.28□□□□□ -0.12
HERC1-206ENST00000559996 ARHGEF5Q12774 1597 aa14.28□□□□□ -0.12
HERC1-206ENST00000559996 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
HERC1-206ENST00000559996 TEX14Q8IWB6 1497 aa14.27□□□□□ -0.12
HERC1-206ENST00000559996 RAPGEF3O95398 923 aa14.26□□□□□ -0.13
HERC1-206ENST00000559996 CFAP74Q9C0B2 1584 aa14.26□□□□□ -0.13
HERC1-206ENST00000559996 ITGAEP38570 1179 aa14.25□□□□□ -0.13
HERC1-206ENST00000559996 PCGF6Q9BYE7 350 aa14.25□□□□□ -0.13
HERC1-206ENST00000559996 CCDC141Q6ZP82 1450 aa14.24□□□□□ -0.13
HERC1-206ENST00000559996 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
HERC1-206ENST00000559996 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
HERC1-206ENST00000559996 DENND4BO75064 1496 aaPredicted RBP14.23□□□□□ -0.13
HERC1-206ENST00000559996 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
HERC1-206ENST00000559996 RICTORQ6R327 1708 aa14.22□□□□□ -0.13
HERC1-206ENST00000559996 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
HERC1-206ENST00000559996 KDM5CP41229 1560 aa14.22□□□□□ -0.13
HERC1-206ENST00000559996 CROCC2H7BZ55 1655 aa14.21□□□□□ -0.13
HERC1-206ENST00000559996 TSPY4P0CV99 314 aa14.21□□□□□ -0.13
HERC1-206ENST00000559996 TSPY10P0CW01 314 aa14.21□□□□□ -0.13
HERC1-206ENST00000559996 NCOA1Q15788 1441 aa14.21□□□□□ -0.13
HERC1-206ENST00000559996 MAST1Q9Y2H9 1570 aa14.21□□□□□ -0.14
HERC1-206ENST00000559996 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
HERC1-206ENST00000559996 ZNF518AQ6AHZ1 1483 aa14.2□□□□□ -0.14
HERC1-206ENST00000559996 SHANK2Q9UPX8 1470 aa14.2□□□□□ -0.14
HERC1-206ENST00000559996 RTEL1-TNFRSF6BF6WH68 1400 aa14.2□□□□□ -0.14
HERC1-206ENST00000559996 ROCK1Q13464 1354 aa14.2□□□□□ -0.14
HERC1-206ENST00000559996 C9orf84Q5VXU9 1444 aa14.19□□□□□ -0.14
HERC1-206ENST00000559996 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
HERC1-206ENST00000559996 DSG3P32926 999 aa14.18□□□□□ -0.14
HERC1-206ENST00000559996 RRP7BPQ9NSQ0 103 aa14.18□□□□□ -0.14
HERC1-206ENST00000559996 SPAG9O60271 1321 aaKnown RBP14.17□□□□□ -0.14
HERC1-206ENST00000559996 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
HERC1-206ENST00000559996 NAIPQ13075 1403 aa14.16□□□□□ -0.14
HERC1-206ENST00000559996 INO80Q9ULG1 1556 aaPredicted RBP14.16□□□□□ -0.14
HERC1-206ENST00000559996 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
HERC1-206ENST00000559996 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
HERC1-206ENST00000559996 HFM1A2PYH4 1435 aa14.15□□□□□ -0.14
HERC1-206ENST00000559996 ATP7AQ04656 1500 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms